Guide to the Human Genome
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Name: SCPEP1 Sequence: fasta or formatted (452aa) NCBI GI: 11055992
Description:

serine carboxypeptidase 1 precursor

Referenced in:

Carboxypeptidases
Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         30           2
 C cysteine            1.1          5           1
 D aspartate           4.6         21           1
 E glutamate           6.2         28           2
 F phenylalanine       4.2         19           2
 G glycine             7.5         34           2
 H histidine           1.1          5           1
 I isoleucine          4.0         18           2
 K lysine              6.6         30           2
 L leucine            11.9         54           4
 M methionine          4.0         18           2
 N asparagine          4.0         18           1
 P proline             4.4         20           1
 Q glutamine           4.0         18           2
 R arginine            2.9         13           2
 S serine              7.5         34           2
 T threonine           4.9         22           2
 V valine              7.3         33           1
 W tryptophan          3.3         15           2
 Y tyrosine            3.8         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine carboxypeptidase 1 precursor 
CPVL                  0.133   serine carboxypeptidase vitellogenic-like 
CPVL                  0.133   serine carboxypeptidase vitellogenic-like 
CTSA                  0.068   cathepsin A isoform a precursor 
CTSA                  0.068   cathepsin A isoform b precursor 
ARHGAP4               0.007   Rho GTPase activating protein 4 
ZNF836                0.006   zinc finger protein 836 
ATP13A1               0.006   ATPase type 13A1 
LOC100292021          0.004   PREDICTED: similar to thioredoxin peroxidase 
PRDX4                 0.004   peroxiredoxin 4 
PAICS                 0.004   phosphoribosylaminoimidazole carboxylase, phosphori...
PAICS                 0.004   phosphoribosylaminoimidazole carboxylase, phosphori...
PAICS                 0.004   phosphoribosylaminoimidazole carboxylase, phosphoribo...
ZNF616                0.004   zinc finger protein 616 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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