Guide to the Human Genome
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Name: NDUFA13 Sequence: fasta or formatted (227aa) NCBI GI: 156151369
Description:

NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         17           2
 C cysteine            0.4          1           1
 D aspartate           4.0          9           1
 E glutamate           6.2         14           3
 F phenylalanine       3.1          7           1
 G glycine             7.0         16           2
 H histidine           2.2          5           1
 I isoleucine          5.3         12           2
 K lysine              3.5          8           1
 L leucine             9.3         21           2
 M methionine          4.0          9           1
 N asparagine          1.3          3           1
 P proline             7.9         18           3
 Q glutamine           3.5          8           1
 R arginine           10.1         23           3
 S serine              6.6         15           2
 T threonine           6.6         15           2
 V valine              5.7         13           1
 W tryptophan          2.6          6           1
 Y tyrosine            3.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADH dehydrogenase (ubiquinone) 1 alpha subcomplex,... 
GAL3ST1               0.014   galactose-3-O-sulfotransferase 1 
SPTBN4                0.009   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
C15orf2               0.009   hypothetical protein LOC23742 
CCDC63                0.009   coiled-coil domain containing 63 
PICK1                 0.007   protein interacting with C kinase 1 
PICK1                 0.007   protein interacting with C kinase 1 
PICK1                 0.007   protein interacting with C kinase 1 
PCDHGC3               0.007   protocadherin gamma subfamily C, 3 isoform 2 precurs...
PCDHGC3               0.007   protocadherin gamma subfamily C, 3 isoform 1 precurs...
AP4M1                 0.007   adaptor-related protein complex 4, mu 1 subunit [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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