Search of human proteins with 153218487

Search of human proteins with 153218487

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|153218487 KDEL (Lys-Asp-Glu-Leu) containing 2 [Homo sapiens]
         (507 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|153218487 KDEL (Lys-Asp-Glu-Leu) containing 2 [Homo sapiens]      1036   0.0  
gi|176866369 KDEL (Lys-Asp-Glu-Leu) containing 1 [Homo sapiens]       539   e-153
gi|31982953 KTEL (Lys-Tyr-Glu-Leu) containing 1 [Homo sapiens]        134   3e-31
gi|160420317 filamin A, alpha isoform 2 [Homo sapiens]                 35   0.21 
gi|116063573 filamin A, alpha isoform 1 [Homo sapiens]                 35   0.21 
gi|188595687 gamma filamin isoform b [Homo sapiens]                    33   0.80 
gi|116805322 gamma filamin isoform a [Homo sapiens]                    33   0.80 
gi|105990514 filamin B, beta (actin binding protein 278) [Homo s...    32   1.8  
gi|38708321 INO80 complex homolog 1 [Homo sapiens]                     32   1.8  
gi|192448443 FK506 binding protein 10 [Homo sapiens]                   30   4.0  
gi|221139773 v-myb myeloblastosis viral oncogene homolog (avian)...    30   5.2  
gi|122937231 v-myb myeloblastosis viral oncogene homolog (avian)...    30   5.2  
gi|50658087 abhydrolase domain containing 4 [Homo sapiens]             30   6.8  

>gi|153218487 KDEL (Lys-Asp-Glu-Leu) containing 2 [Homo sapiens]
          Length = 507

 Score = 1036 bits (2679), Expect = 0.0
 Identities = 507/507 (100%), Positives = 507/507 (100%)

Query: 1   MRRLPRALLLQLRLALLVAAGAPEVLVSAPRSLVWGPGLQAAVVLPVRYFYLQAVNSEGQ 60
           MRRLPRALLLQLRLALLVAAGAPEVLVSAPRSLVWGPGLQAAVVLPVRYFYLQAVNSEGQ
Sbjct: 1   MRRLPRALLLQLRLALLVAAGAPEVLVSAPRSLVWGPGLQAAVVLPVRYFYLQAVNSEGQ 60

Query: 61  NLTRSPAGETPFKVVVKSLSPKELVRIHVPKPLDRNDGTFLMRYRMYETVDEGLKIEVLY 120
           NLTRSPAGETPFKVVVKSLSPKELVRIHVPKPLDRNDGTFLMRYRMYETVDEGLKIEVLY
Sbjct: 61  NLTRSPAGETPFKVVVKSLSPKELVRIHVPKPLDRNDGTFLMRYRMYETVDEGLKIEVLY 120

Query: 121 GDEHVAQSPYILKGPVYHEYCECPEDPQAWQKTLSCPTKEPQIAKDFASFPSINLQQMLK 180
           GDEHVAQSPYILKGPVYHEYCECPEDPQAWQKTLSCPTKEPQIAKDFASFPSINLQQMLK
Sbjct: 121 GDEHVAQSPYILKGPVYHEYCECPEDPQAWQKTLSCPTKEPQIAKDFASFPSINLQQMLK 180

Query: 181 EVPKRFGDERGAIVHYTILNNHVYRRSLGKYTDFKMFSDEILLSLTRKVLLPDLEFYVNL 240
           EVPKRFGDERGAIVHYTILNNHVYRRSLGKYTDFKMFSDEILLSLTRKVLLPDLEFYVNL
Sbjct: 181 EVPKRFGDERGAIVHYTILNNHVYRRSLGKYTDFKMFSDEILLSLTRKVLLPDLEFYVNL 240

Query: 241 GDWPLEHRKVNGTPSPIPIISWCGSLDSRDVVLPTYDITHSMLEAMRGVTNDLLSIQGNT 300
           GDWPLEHRKVNGTPSPIPIISWCGSLDSRDVVLPTYDITHSMLEAMRGVTNDLLSIQGNT
Sbjct: 241 GDWPLEHRKVNGTPSPIPIISWCGSLDSRDVVLPTYDITHSMLEAMRGVTNDLLSIQGNT 300

Query: 301 GPSWINKTERAFFRGRDSREERLQLVQLSKENPQLLDAGITGYFFFQEKEKELGKAKLMG 360
           GPSWINKTERAFFRGRDSREERLQLVQLSKENPQLLDAGITGYFFFQEKEKELGKAKLMG
Sbjct: 301 GPSWINKTERAFFRGRDSREERLQLVQLSKENPQLLDAGITGYFFFQEKEKELGKAKLMG 360

Query: 361 FFDFFKYKYQVNVDGTVAAYRYPYLMLGDSLVLKQDSPYYEHFYMALEPWKHYVPIKRNL 420
           FFDFFKYKYQVNVDGTVAAYRYPYLMLGDSLVLKQDSPYYEHFYMALEPWKHYVPIKRNL
Sbjct: 361 FFDFFKYKYQVNVDGTVAAYRYPYLMLGDSLVLKQDSPYYEHFYMALEPWKHYVPIKRNL 420

Query: 421 SDLLEKVKWAKENDEEAKKIAKEGQLMARDLLQPHRLYCYYYQVLQKYAERQSSKPEVRD 480
           SDLLEKVKWAKENDEEAKKIAKEGQLMARDLLQPHRLYCYYYQVLQKYAERQSSKPEVRD
Sbjct: 421 SDLLEKVKWAKENDEEAKKIAKEGQLMARDLLQPHRLYCYYYQVLQKYAERQSSKPEVRD 480

Query: 481 GMELVPQPEDSTAICQCHRKKPSREEL 507
           GMELVPQPEDSTAICQCHRKKPSREEL
Sbjct: 481 GMELVPQPEDSTAICQCHRKKPSREEL 507


>gi|176866369 KDEL (Lys-Asp-Glu-Leu) containing 1 [Homo sapiens]
          Length = 502

 Score =  539 bits (1389), Expect = e-153
 Identities = 263/482 (54%), Positives = 359/482 (74%), Gaps = 10/482 (2%)

Query: 27  VSAPRSLVWGPGLQAAVVLPVRYFYLQAVNSEGQNLTRSPAGETPFKVVVKSLSPKELVR 86
           +S  +S +WGPGL+A VVLP RYFY+QAV++ G   T SP GE  F+V V S   ++  R
Sbjct: 27  LSPEKSEIWGPGLKADVVLPARYFYIQAVDTSGNKFTSSP-GEKVFQVKV-SAPEEQFTR 84

Query: 87  IHVPKPLDRNDGTFLMRYRMYETVDEGLKIEVLYGDEHVAQSPYILKGPVYHEYCECP-E 145
           + V + LDR DG+F++RYRMY +  + LK+E+ +  +HVA+SPYILKGPVYHE C+CP +
Sbjct: 85  VGV-QVLDRKDGSFIVRYRMYASY-KNLKVEIKFQGQHVAKSPYILKGPVYHENCDCPLQ 142

Query: 146 DPQAWQKTLSCPTKEPQIAKDFASFPSINLQQMLKEVPKRFGDERGAIVHYTILNNHVYR 205
           D  AW + ++CP    QI +D A FP+++ +++  E+PKRFG +R ++ HYT+ +N VY 
Sbjct: 143 DSAAWLREMNCPETIAQIQRDLAHFPAVDPEKIAVEIPKRFG-QRQSLCHYTLKDNKVYI 201

Query: 206 RSLGKYTDFKMFSDEILLSLTRKVLLPDLEFYVNLGDWPLEHRKVNGTPSPIPIISWCGS 265
           ++ G++  F++F D ILLSLTRKV +PD+E +VNLGDWPLE +K N    PI   SWCGS
Sbjct: 202 KTHGEHVGFRIFMDAILLSLTRKVKMPDVELFVNLGDWPLEKKKSNSNIHPI--FSWCGS 259

Query: 266 LDSRDVVLPTYDITHSMLEAMRGVTNDLLSIQGNTGPSWINKTERAFFRGRDSREERLQL 325
            DS+D+V+PTYD+T S+LE M  V+ D++S+Q NTGP W +K   A +RGRDSR+ERL+L
Sbjct: 260 TDSKDIVMPTYDLTDSVLETMGRVSLDMMSVQANTGPPWESKNSTAVWRGRDSRKERLEL 319

Query: 326 VQLSKENPQLLDAGITGYFFFQEKEKELGK-AKLMGFFDFFKYKYQVNVDGTVAAYRYPY 384
           V+LS+++P+L+DA  T +FFF+  E   G   K + FFDFFK+KYQ+N+DGTVAAYR PY
Sbjct: 320 VKLSRKHPELIDAAFTNFFFFKHDENLYGPIVKHISFFDFFKHKYQINIDGTVAAYRLPY 379

Query: 385 LMLGDSLVLKQDSPYYEHFYMALEPWKHYVPIKRNLSDLLEKVKWAKENDEEAKKIAKEG 444
           L++GDS+VLKQDS YYEHFY  L+PWKHY+P+K NLSDLLEK+KWAK++DEEAKKIAK G
Sbjct: 380 LLVGDSVVLKQDSIYYEHFYNELQPWKHYIPVKSNLSDLLEKLKWAKDHDEEAKKIAKAG 439

Query: 445 QLMARDLLQPHRLYCYYYQVLQKYAERQSSKPEVRDGMELV-PQPEDSTAICQCHRKKPS 503
           Q  AR+ L    ++CYY+++ Q+YA  Q S+P++R+GM+ V PQ ED    C CHRKK  
Sbjct: 440 QEFARNNLMGDDIFCYYFKLFQEYANLQVSEPQIREGMKRVEPQTEDDLFPCTCHRKKTK 499

Query: 504 RE 505
            E
Sbjct: 500 DE 501


>gi|31982953 KTEL (Lys-Tyr-Glu-Leu) containing 1 [Homo sapiens]
          Length = 392

 Score =  134 bits (336), Expect = 3e-31
 Identities = 98/343 (28%), Positives = 166/343 (48%), Gaps = 24/343 (6%)

Query: 155 SCPTKEPQIAKDFASFPSINLQQMLKEVPKRFGDERGAIVHYTILNNHVYRRSLGKYTDF 214
           +C      I +D   F     ++M+ EV +R   + G   HY I  N +YR +   +   
Sbjct: 53  NCSCYHGVIEEDLTPFRGGISRKMMAEVVRR---KLGT--HYQITKNRLYRENDCMFPSR 107

Query: 215 KMFSDEILLSLTRKVLLPDLEFYVNLGDWPLEHRKVNGTPSPIPIISWCGSLDSRDVVLP 274
               +  +L +  +  LPD+E  +N+ D+P   + +      IP+ S+  + +  D++ P
Sbjct: 108 CSGVEHFILEVIGR--LPDMEMVINVRDYPQVPKWMEPA---IPVFSFSKTSEYHDIMYP 162

Query: 275 TYD----------ITHSMLEAMRGVTNDLLSIQGNTGPSWINKTERAFFRGRDSREERLQ 324
            +           I  + L        DL  ++      W  K   A+FRG  +  ER  
Sbjct: 163 AWTFWEGGPAVWPIYPTGLGRWDLFREDL--VRSAAQWPWKKKNSTAYFRGSRTSPERDP 220

Query: 325 LVQLSKENPQLLDAGITGYFFFQEKEKELGK--AKLMGFFDFFKYKYQVNVDGTVAAYRY 382
           L+ LS++NP+L+DA  T    ++  +  LGK  AK +   D  KYKY  N  G  A++R+
Sbjct: 221 LILLSRKNPKLVDAEYTKNQAWKSMKDTLGKPAAKDVHLVDHCKYKYLFNFRGVAASFRF 280

Query: 383 PYLMLGDSLVLKQDSPYYEHFYMALEPWKHYVPIKRNLSDLLEKVKWAKENDEEAKKIAK 442
            +L L  SLV      + E FY  L+PW HY+P+K +LS++ E +++ K ND+ A++IA+
Sbjct: 281 KHLFLCGSLVFHVGDEWLEFFYPQLKPWVHYIPVKTDLSNVQELLQFVKANDDVAQEIAE 340

Query: 443 EGQLMARDLLQPHRLYCYYYQVLQKYAERQSSKPEVRDGMELV 485
            G    R+ LQ   + CY+  +L +Y++  S     R G + +
Sbjct: 341 RGSQFIRNHLQMDDITCYWENLLSEYSKFLSYNVTRRKGYDQI 383


>gi|160420317 filamin A, alpha isoform 2 [Homo sapiens]
          Length = 2647

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 14/98 (14%)

Query: 36   GPGLQAAVVLPVRYFYLQAVNSEGQNLTRSPAGETPFKVVVKSLSPKELVRIHVPKPLDR 95
            GPGL   +V        +A   +   +  S AG  P +V V+   PK LV       +D 
Sbjct: 1455 GPGLSPGMV--------RANLPQSFQVDTSKAGVAPLQVKVQG--PKGLVE--PVDVVDN 1502

Query: 96   NDGTFLMRYRMYETVDEGLKIEVLYGDEHVAQSPYILK 133
             DGT  + Y    + +    I VLYGDE V +SP+ +K
Sbjct: 1503 ADGTQTVNY--VPSREGPYSISVLYGDEEVPRSPFKVK 1538



 Score = 29.3 bits (64), Expect = 8.8
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 18/97 (18%)

Query: 35  WGPGLQAAVVLPVRYFYLQAVNSEGQNLTRSPAGETPFKVVVKSLSPKELVRIHVPKPLD 94
           WGPGL+  VV     F ++A+  +   L  S  G +  K+                   D
Sbjct: 582 WGPGLEGGVVGKSADFVVEAIGDDVGTLGFSVEGPSQAKIECD----------------D 625

Query: 95  RNDGTFLMRYRMYETVDEGLKIEVLYGDEHVAQSPYI 131
           + DG+  +RY   E  +    + VL   E +  SP++
Sbjct: 626 KGDGSCDVRYWPQEAGE--YAVHVLCNSEDIRLSPFM 660


>gi|116063573 filamin A, alpha isoform 1 [Homo sapiens]
          Length = 2639

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 14/98 (14%)

Query: 36   GPGLQAAVVLPVRYFYLQAVNSEGQNLTRSPAGETPFKVVVKSLSPKELVRIHVPKPLDR 95
            GPGL   +V        +A   +   +  S AG  P +V V+   PK LV       +D 
Sbjct: 1455 GPGLSPGMV--------RANLPQSFQVDTSKAGVAPLQVKVQG--PKGLVE--PVDVVDN 1502

Query: 96   NDGTFLMRYRMYETVDEGLKIEVLYGDEHVAQSPYILK 133
             DGT  + Y    + +    I VLYGDE V +SP+ +K
Sbjct: 1503 ADGTQTVNY--VPSREGPYSISVLYGDEEVPRSPFKVK 1538



 Score = 29.3 bits (64), Expect = 8.8
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 18/97 (18%)

Query: 35  WGPGLQAAVVLPVRYFYLQAVNSEGQNLTRSPAGETPFKVVVKSLSPKELVRIHVPKPLD 94
           WGPGL+  VV     F ++A+  +   L  S  G +  K+                   D
Sbjct: 582 WGPGLEGGVVGKSADFVVEAIGDDVGTLGFSVEGPSQAKIECD----------------D 625

Query: 95  RNDGTFLMRYRMYETVDEGLKIEVLYGDEHVAQSPYI 131
           + DG+  +RY   E  +    + VL   E +  SP++
Sbjct: 626 KGDGSCDVRYWPQEAGE--YAVHVLCNSEDIRLSPFM 660


>gi|188595687 gamma filamin isoform b [Homo sapiens]
          Length = 2692

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 20/110 (18%)

Query: 22  APEVLVSAPRSLVWGPGLQAAVVLPVRYFYLQAVNSEGQNLTRSPAGETPFKVVVKSLSP 81
           +PE  V   R+  WGPGL+   V     F ++A+ +E   L  S  G +  K+       
Sbjct: 566 SPEAGVQKVRA--WGPGLETGQVGKSADFVVEAIGTEVGTLGFSIEGPSQAKIECD---- 619

Query: 82  KELVRIHVPKPLDRNDGTFLMRYRMYETVDEGLKIEVLYGDEHVAQSPYI 131
                       D+ DG+  +RY  + T      + V+  DE +  SP+I
Sbjct: 620 ------------DKGDGSCDVRY--WPTEPGEYAVHVICDDEDIRDSPFI 655



 Score = 30.0 bits (66), Expect = 5.2
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 4/38 (10%)

Query: 94   DRNDGTFLMRYRMYETVDEGLK-IEVLYGDEHVAQSPY 130
            D  DGT+ ++Y  YE   EG+  +EVLY +  V +SP+
Sbjct: 1306 DNGDGTYRVQYTAYE---EGVHLVEVLYDEVAVPKSPF 1340


>gi|116805322 gamma filamin isoform a [Homo sapiens]
          Length = 2725

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 20/110 (18%)

Query: 22  APEVLVSAPRSLVWGPGLQAAVVLPVRYFYLQAVNSEGQNLTRSPAGETPFKVVVKSLSP 81
           +PE  V   R+  WGPGL+   V     F ++A+ +E   L  S  G +  K+       
Sbjct: 566 SPEAGVQKVRA--WGPGLETGQVGKSADFVVEAIGTEVGTLGFSIEGPSQAKIECD---- 619

Query: 82  KELVRIHVPKPLDRNDGTFLMRYRMYETVDEGLKIEVLYGDEHVAQSPYI 131
                       D+ DG+  +RY  + T      + V+  DE +  SP+I
Sbjct: 620 ------------DKGDGSCDVRY--WPTEPGEYAVHVICDDEDIRDSPFI 655



 Score = 30.0 bits (66), Expect = 5.2
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 4/38 (10%)

Query: 94   DRNDGTFLMRYRMYETVDEGLK-IEVLYGDEHVAQSPY 130
            D  DGT+ ++Y  YE   EG+  +EVLY +  V +SP+
Sbjct: 1306 DNGDGTYRVQYTAYE---EGVHLVEVLYDEVAVPKSPF 1340


>gi|105990514 filamin B, beta (actin binding protein 278) [Homo
           sapiens]
          Length = 2602

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 18/97 (18%)

Query: 35  WGPGLQAAVVLPVRYFYLQAVNSEGQNLTRSPAGETPFKVVVKSLSPKELVRIHVPKPLD 94
           WGPGL   +V     F ++++ SE  +L  +  G +  K+                   D
Sbjct: 555 WGPGLHGGIVGRSADFVVESIGSEVGSLGFAIEGPSQAKIEYN----------------D 598

Query: 95  RNDGTFLMRYRMYETVDEGLKIEVLYGDEHVAQSPYI 131
           +NDG+  ++Y   E  +    + ++  DE +  SPY+
Sbjct: 599 QNDGSCDVKYWPKEPGE--YAVHIMCDDEDIKDSPYM 633



 Score = 30.4 bits (67), Expect = 4.0
 Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 19/110 (17%)

Query: 26   LVSAPRSLVWGPGLQAAVVLPVRYFYLQAVNSEGQNLTRSPAGETPFKVVVKSLSPKELV 85
            +V   +  + GPGL + V    R   LQ+   +      S AG  P +V V  L P+ LV
Sbjct: 1418 VVDPSKVKIAGPGLGSGV----RARVLQSFTVDS-----SKAGLAPLEVRV--LGPRGLV 1466

Query: 86   R-IHVPKPLDRNDGTFLMRYRMYETVDEG-LKIEVLYGDEHVAQSPYILK 133
              ++V   +D  DGT  + Y   +   EG   + V Y DE + +SP+ +K
Sbjct: 1467 EPVNV---VDNGDGTHTVTYTPSQ---EGPYMVSVKYADEEIPRSPFKVK 1510


>gi|38708321 INO80 complex homolog 1 [Homo sapiens]
          Length = 1556

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 348 EKEKELGKAKLMGFFDFFKYK--YQVNVDGTVAAYRYPYLMLGDSLVLKQDSPYYEHFYM 405
           E+E  L + +L       KYK  +Q          +Y Y   G   +L    P+YE    
Sbjct: 147 EEELNLSREELHNMLRLHKYKKLHQNKYSKDKELQQYQYYSAG---LLSTYDPFYEQQRH 203

Query: 406 ALEPWKHYVPIKRNLSDLLEKVKWAKENDEE 436
            L P K     ++ L   L+KVK  +  DEE
Sbjct: 204 LLGPKKKKFKEEKKLKAKLKKVKKKRRRDEE 234


>gi|192448443 FK506 binding protein 10 [Homo sapiens]
          Length = 582

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 12/88 (13%)

Query: 36  GPGLQAAVVLPVRYFYLQAVNSEGQNLTR-SPAGETPFKVVVKSLSPKELVRIHVPK--P 92
           GP   + + LP+    L  V + G+ L R SPAG     VV++        R H+P+  P
Sbjct: 5   GPPSHSLLRLPLLQLLLLVVQAVGRGLGRASPAGGPLEDVVIE--------RYHIPRACP 56

Query: 93  LDRNDGTFLMRYRMYETVDEGLKIEVLY 120
            +   G F +RY    T ++G K +  Y
Sbjct: 57  REVQMGDF-VRYHYNGTFEDGKKFDSSY 83


>gi|221139773 v-myb myeloblastosis viral oncogene homolog
           (avian)-like 1 isoform 2 [Homo sapiens]
          Length = 692

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 8/48 (16%)

Query: 396 DSPYYEHFYMALEPWKHYVPIKRNLSDLLEKVKWAKENDEEAKKIAKE 443
           D  Y +H Y         VP ++ L  L  +VKW ++ D++ KK+ ++
Sbjct: 13  DLQYADHDYE--------VPQQKGLKKLWNRVKWTRDEDDKLKKLVEQ 52


>gi|122937231 v-myb myeloblastosis viral oncogene homolog
           (avian)-like 1 isoform 1 [Homo sapiens]
          Length = 752

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 8/48 (16%)

Query: 396 DSPYYEHFYMALEPWKHYVPIKRNLSDLLEKVKWAKENDEEAKKIAKE 443
           D  Y +H Y         VP ++ L  L  +VKW ++ D++ KK+ ++
Sbjct: 13  DLQYADHDYE--------VPQQKGLKKLWNRVKWTRDEDDKLKKLVEQ 52


>gi|50658087 abhydrolase domain containing 4 [Homo sapiens]
          Length = 342

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)

Query: 64  RSPAGETPFKVVVKSLS---PKELVRIHVPKPLDRNDGTFLMRYRMYETVD--EGLKIEV 118
           ++P+GET FK +++S        L RIH    L R D    M Y     +D   G K+++
Sbjct: 248 QNPSGETAFKAMMESFGWARRPMLERIH----LIRKDVPITMIYGSDTWIDTSTGKKVKM 303

Query: 119 LYGDEHVAQSPYILKGPVYHEYCECP 144
              D +V      +KG  +H Y + P
Sbjct: 304 QRPDSYVRDME--IKGASHHVYADQP 327


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,558,123
Number of Sequences: 37866
Number of extensions: 978287
Number of successful extensions: 2244
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2192
Number of HSP's gapped (non-prelim): 51
length of query: 507
length of database: 18,247,518
effective HSP length: 107
effective length of query: 400
effective length of database: 14,195,856
effective search space: 5678342400
effective search space used: 5678342400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.