Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KTELC1 Sequence: fasta or formatted (392aa) NCBI GI: 31982953
Description:

KTEL (Lys-Tyr-Glu-Leu) containing 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         18           2
 C cysteine            2.0          8           1
 D aspartate           5.1         20           2
 E glutamate           6.4         25           2
 F phenylalanine       5.4         21           2
 G glycine             4.8         19           2
 H histidine           2.6         10           1
 I isoleucine          4.6         18           2
 K lysine              7.1         28           3
 L leucine             9.4         37           3
 M methionine          2.8         11           2
 N asparagine          3.8         15           1
 P proline             5.9         23           1
 Q glutamine           3.8         15           1
 R arginine            6.4         25           2
 S serine              7.1         28           2
 T threonine           3.6         14           1
 V valine              6.1         24           2
 W tryptophan          3.8         15           2
 Y tyrosine            4.6         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KTEL (Lys-Tyr-Glu-Leu) containing 1 
KDELC1                0.168   KDEL (Lys-Asp-Glu-Leu) containing 1 
KDELC2                0.135   KDEL (Lys-Asp-Glu-Leu) containing 2 
EP400                 0.006   E1A binding protein p400 
DNAH14                0.006   dynein, axonemal, heavy polypeptide 14 isoform 1 [H...
SEC23IP               0.006   Sec23-interacting protein p125 
CHMP4C                0.005   chromatin modifying protein 4C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press