Search of human proteins with 15088795

Search of human proteins with 15088795

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|15088795 phosphatidylinositol glycan anchor biosynthesis,
class S [Homo sapiens]
         (555 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|15088795 phosphatidylinositol glycan anchor biosynthesis, cla...  1087   0.0  
gi|122937215 prospero homeobox 2 [Homo sapiens]                        32   1.5  
gi|157167158 zinc finger protein 808 [Homo sapiens]                    32   1.5  
gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens]     31   2.6  
gi|56676335 RAP1 interacting factor 1 [Homo sapiens]                   31   2.6  
gi|84626580 hypothetical protein LOC80178 [Homo sapiens]               31   2.6  
gi|239753377 PREDICTED: hypothetical protein [Homo sapiens]            30   5.8  
gi|239747944 PREDICTED: hypothetical protein XP_002346483 [Homo ...    30   5.8  
gi|42542381 solute carrier family 28, member 1 isoform 1 [Homo s...    30   7.6  
gi|62526031 neurochondrin isoform 2 [Homo sapiens]                     29   9.9  
gi|24307949 neurochondrin isoform 1 [Homo sapiens]                     29   9.9  
gi|62526029 neurochondrin isoform 1 [Homo sapiens]                     29   9.9  

>gi|15088795 phosphatidylinositol glycan anchor biosynthesis, class
           S [Homo sapiens]
          Length = 555

 Score = 1087 bits (2810), Expect = 0.0
 Identities = 555/555 (100%), Positives = 555/555 (100%)

Query: 1   MAAAGAAATHLEVARGKRAALFFAAVAIVLGLPLWWKTTETYRASLPYSQISGLNALQLR 60
           MAAAGAAATHLEVARGKRAALFFAAVAIVLGLPLWWKTTETYRASLPYSQISGLNALQLR
Sbjct: 1   MAAAGAAATHLEVARGKRAALFFAAVAIVLGLPLWWKTTETYRASLPYSQISGLNALQLR 60

Query: 61  LMVPVTVVFTRESVPLDDQEKLPFTVVHEREIPLKYKMKIKCRFQKAYRRALDHEEEALS 120
           LMVPVTVVFTRESVPLDDQEKLPFTVVHEREIPLKYKMKIKCRFQKAYRRALDHEEEALS
Sbjct: 61  LMVPVTVVFTRESVPLDDQEKLPFTVVHEREIPLKYKMKIKCRFQKAYRRALDHEEEALS 120

Query: 121 SGSVQEAEAMLDEPQEQAEGSLTVYVISEHSSLLPQDMMSYIGPKRTAVVRGIMHREAFN 180
           SGSVQEAEAMLDEPQEQAEGSLTVYVISEHSSLLPQDMMSYIGPKRTAVVRGIMHREAFN
Sbjct: 121 SGSVQEAEAMLDEPQEQAEGSLTVYVISEHSSLLPQDMMSYIGPKRTAVVRGIMHREAFN 180

Query: 181 IIGRRIVQVAQAMSLTEDVLAAALADHLPEDKWSAEKRRPLKSSLGYEITFSLLNPDPKS 240
           IIGRRIVQVAQAMSLTEDVLAAALADHLPEDKWSAEKRRPLKSSLGYEITFSLLNPDPKS
Sbjct: 181 IIGRRIVQVAQAMSLTEDVLAAALADHLPEDKWSAEKRRPLKSSLGYEITFSLLNPDPKS 240

Query: 241 HDVYWDIEGAVRRYVQPFLNALGAAGNFSVDSQILYYAMLGVNPRFDSASSSYYLDMHSL 300
           HDVYWDIEGAVRRYVQPFLNALGAAGNFSVDSQILYYAMLGVNPRFDSASSSYYLDMHSL
Sbjct: 241 HDVYWDIEGAVRRYVQPFLNALGAAGNFSVDSQILYYAMLGVNPRFDSASSSYYLDMHSL 300

Query: 301 PHVINPVESRLGSSAASLYPVLNFLLYVPELAHSPLYIQDKDGAPVATNAFHSPRWGGIM 360
           PHVINPVESRLGSSAASLYPVLNFLLYVPELAHSPLYIQDKDGAPVATNAFHSPRWGGIM
Sbjct: 301 PHVINPVESRLGSSAASLYPVLNFLLYVPELAHSPLYIQDKDGAPVATNAFHSPRWGGIM 360

Query: 361 VYNVDSKTYNASVLPVRVEVDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMT 420
           VYNVDSKTYNASVLPVRVEVDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMT
Sbjct: 361 VYNVDSKTYNASVLPVRVEVDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMT 420

Query: 421 WELDRLLWARSVENLATATTTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELA 480
           WELDRLLWARSVENLATATTTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELA
Sbjct: 421 WELDRLLWARSVENLATATTTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELA 480

Query: 481 SGHLASAFVASQEAVTSSELAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSLVKI 540
           SGHLASAFVASQEAVTSSELAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSLVKI
Sbjct: 481 SGHLASAFVASQEAVTSSELAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSLVKI 540

Query: 541 FLETRKSWRKPEKTD 555
           FLETRKSWRKPEKTD
Sbjct: 541 FLETRKSWRKPEKTD 555


>gi|122937215 prospero homeobox 2 [Homo sapiens]
          Length = 592

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 10/90 (11%)

Query: 60  RLMVPVTVVFTRESVPLDDQEKLPFTVVHEREIPLKYKMKIKCRFQKAYRRALD----HE 115
           R   P  +V +++  PL      PFT  H   +PL   +K++ R   A   AL     H 
Sbjct: 383 RTTKPQPLVLSQQQCPL------PFTSAHLESLPLLPSVKMEQRGLHAVMEALPFSLLHI 436

Query: 116 EEALSSGSVQEAEAMLDEPQEQAEGSLTVY 145
           +E L+ G +++A+ M    +  +   L VY
Sbjct: 437 QEGLNPGHLKKAKLMFFFTRYPSSNLLKVY 466


>gi|157167158 zinc finger protein 808 [Homo sapiens]
          Length = 903

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 296 DMHSLPHVIN-PVESRLGSSAASLYPVLNFLLYVPELAHSPLYIQDKDGAPVATNAFHSP 354
           D H   H  N P++ +LGSS  S  P L+      E+A+  L     D + V+T+   S 
Sbjct: 140 DQHDHRHAGNKPIKDQLGSSFYSHLPELHIFQIKGEIANQ-LEKSTSDASSVSTSQRISC 198

Query: 355 RWGGIMVYNVDSKTYNASVLPVRVEVDM 382
           R    +  N  +   N+S+LP + EV M
Sbjct: 199 RPQIHISNNYGNNPLNSSLLPQKQEVHM 226


>gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens]
          Length = 412

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 16/112 (14%)

Query: 227 YEITFSLLNPDPKSHDVYWDIEGAVRRYVQPF-------LNALGAAGNFSVDSQILYYAM 279
           YE  F+LL+    ++  YWD+  +VR+ V  +       L  L   GN  + +   YY +
Sbjct: 301 YESPFTLLSCGYDTYVRYWDLRTSVRKCVMEWEEPHDSTLYCLQTDGNHLLATGSSYYGV 360

Query: 280 LGVNPRFDSASSSYYLDMHSLPHVINPVESR---LGSSAASLYPVLNFLLYV 328
           + +  R   A       +H+ P    P+ S    L  +   LY  L++ L+V
Sbjct: 361 VRLWDRRQRAC------LHAFPLTSTPLSSPVYCLRLTTKHLYAALSYNLHV 406


>gi|56676335 RAP1 interacting factor 1 [Homo sapiens]
          Length = 2472

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 3/96 (3%)

Query: 436  ATATTTLTSLAQLLGKISN--IVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQE 493
            A  T T T  ++   K+ N  +V++ D+  E +     V++ ++ LASG   S  +    
Sbjct: 2082 ANKTETNTEYSKSEEKLDNNQMVMESDILQEDHHTSQKVEEPSQCLASGTAISELIIEDN 2141

Query: 494  AVTSSELAFFDPSLLHLLYFPDD-QKFAIYIPLFLP 528
              +  +L   DPSL+     P   Q   ++ PL  P
Sbjct: 2142 NASPQKLRELDPSLVSANDSPSGMQTRCVWSPLASP 2177


>gi|84626580 hypothetical protein LOC80178 [Homo sapiens]
          Length = 433

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 328 VPELAHSPLYIQDKDGAPVATNAFHSPRWGG-IMVYNVDSKTYNASVLPVRVEV--DMVR 384
           V E    P  +    GA  +      P W   ++VY+   +    + L +RV V    + 
Sbjct: 323 VAEQPPRPCPVGRPPGASPSCGGRAEPAWSPQLLVYSSTQELQTLAALKLRVAVLDQQIH 382

Query: 385 VMEVFLAQLRLLFGIAQPQLPP 406
           + +V +A+L  L   AQPQ PP
Sbjct: 383 LEKVLMAELLPLVSAAQPQGPP 404


>gi|239753377 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 328

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 7/72 (9%)

Query: 468 AVAAVQKSAEELASGHLASAFVASQEAVTSSELAFFDPSLLHLLYFPDDQKFAIYIPLFL 527
           A   V   A +L S  ++S  VA+++    +       SL HL     ++K  IY PL  
Sbjct: 3   AKVGVAGQAWQLQSSGISSCSVATRQLPRGA-------SLEHLWNSAKNRKIMIYSPLLA 55

Query: 528 PMAVPILLSLVK 539
           P+  P+L S+ K
Sbjct: 56  PLQFPLLESIGK 67


>gi|239747944 PREDICTED: hypothetical protein XP_002346483 [Homo
           sapiens]
          Length = 328

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 7/72 (9%)

Query: 468 AVAAVQKSAEELASGHLASAFVASQEAVTSSELAFFDPSLLHLLYFPDDQKFAIYIPLFL 527
           A   V   A +L S  ++S  VA+++    +       SL HL     ++K  IY PL  
Sbjct: 3   AKVGVAGQAWQLQSSGISSCSVATRQLPRGA-------SLEHLWNSAKNRKIMIYSPLLA 55

Query: 528 PMAVPILLSLVK 539
           P+  P+L S+ K
Sbjct: 56  PLQFPLLESIGK 67


>gi|42542381 solute carrier family 28, member 1 isoform 1 [Homo
           sapiens]
          Length = 649

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 408 CLLSGPTSEGLMTWELDRLLWARSVENLATATTTLTSLAQLLGKISN--IVIKDDVASEV 465
           C++S     GLM W + ++ W   V    TAT TL+    +    +   ++I+  +A   
Sbjct: 275 CVISVLYHVGLMQWVILKIAWLMQVTMGTTATETLSVAGNIFVSQTEAPLLIRPYLADMT 334

Query: 466 YKAVAAVQKSAEELASGHLASAFVA 490
              V  V        +G L  A+++
Sbjct: 335 LSEVHVVMTGGYATIAGSLLGAYIS 359


>gi|62526031 neurochondrin isoform 2 [Homo sapiens]
          Length = 712

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 22/203 (10%)

Query: 335 PLYIQDKDGAPVATNAFHSPRWGGIMVYNVDSKTYNASVLPVRVEVDMVRVMEVFLAQLR 394
           P  I  K+GAP     +   +W       + S  ++ SVLP  VE+ +     +FL  + 
Sbjct: 460 PREILIKEGAPSLLCKYFLQQW------ELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVV 513

Query: 395 LLFGIAQPQLPPKCLLSG-PTSEGLMTWELDRLLWARSVENLATATTTLTSLAQLLGKIS 453
              G+ +       L++   TS   +  +  RLL A +V  L      L S +  L    
Sbjct: 514 TAPGLIKRDACFTSLMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPAL---- 569

Query: 454 NIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEAVTSSELAFFDP-SLLHLLY 512
               +   AS  + A A +      L+  H+A A   S +AV +    +    + L  L+
Sbjct: 570 ----QGTPASRGFFAAAIL-----FLSQSHVARATPGSDQAVLALSPEYEGIWADLQELW 620

Query: 513 FPDDQKFAIYIPLFLPMAVPILL 535
           F   Q F   +PL LP   P  L
Sbjct: 621 FLGMQAFTGCVPL-LPWLAPAAL 642


>gi|24307949 neurochondrin isoform 1 [Homo sapiens]
          Length = 729

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 22/203 (10%)

Query: 335 PLYIQDKDGAPVATNAFHSPRWGGIMVYNVDSKTYNASVLPVRVEVDMVRVMEVFLAQLR 394
           P  I  K+GAP     +   +W       + S  ++ SVLP  VE+ +     +FL  + 
Sbjct: 477 PREILIKEGAPSLLCKYFLQQW------ELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVV 530

Query: 395 LLFGIAQPQLPPKCLLSG-PTSEGLMTWELDRLLWARSVENLATATTTLTSLAQLLGKIS 453
              G+ +       L++   TS   +  +  RLL A +V  L      L S +  L    
Sbjct: 531 TAPGLIKRDACFTSLMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPAL---- 586

Query: 454 NIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEAVTSSELAFFDP-SLLHLLY 512
               +   AS  + A A +      L+  H+A A   S +AV +    +    + L  L+
Sbjct: 587 ----QGTPASRGFFAAAIL-----FLSQSHVARATPGSDQAVLALSPEYEGIWADLQELW 637

Query: 513 FPDDQKFAIYIPLFLPMAVPILL 535
           F   Q F   +PL LP   P  L
Sbjct: 638 FLGMQAFTGCVPL-LPWLAPAAL 659


>gi|62526029 neurochondrin isoform 1 [Homo sapiens]
          Length = 729

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 22/203 (10%)

Query: 335 PLYIQDKDGAPVATNAFHSPRWGGIMVYNVDSKTYNASVLPVRVEVDMVRVMEVFLAQLR 394
           P  I  K+GAP     +   +W       + S  ++ SVLP  VE+ +     +FL  + 
Sbjct: 477 PREILIKEGAPSLLCKYFLQQW------ELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVV 530

Query: 395 LLFGIAQPQLPPKCLLSG-PTSEGLMTWELDRLLWARSVENLATATTTLTSLAQLLGKIS 453
              G+ +       L++   TS   +  +  RLL A +V  L      L S +  L    
Sbjct: 531 TAPGLIKRDACFTSLMNTLMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPAL---- 586

Query: 454 NIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEAVTSSELAFFDP-SLLHLLY 512
               +   AS  + A A +      L+  H+A A   S +AV +    +    + L  L+
Sbjct: 587 ----QGTPASRGFFAAAIL-----FLSQSHVARATPGSDQAVLALSPEYEGIWADLQELW 637

Query: 513 FPDDQKFAIYIPLFLPMAVPILL 535
           F   Q F   +PL LP   P  L
Sbjct: 638 FLGMQAFTGCVPL-LPWLAPAAL 659


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,833,223
Number of Sequences: 37866
Number of extensions: 775584
Number of successful extensions: 1885
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1884
Number of HSP's gapped (non-prelim): 12
length of query: 555
length of database: 18,247,518
effective HSP length: 107
effective length of query: 448
effective length of database: 14,195,856
effective search space: 6359743488
effective search space used: 6359743488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.