Search of human proteins with 110224463

Search of human proteins with 110224463

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|110224463 phosphatidylinositol
N-acetylglucosaminyltransferase subunit A isoform 3 [Homo sapiens]
         (169 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11863130 phosphatidylinositol N-acetylglucosaminyltransferase...   343   5e-95
gi|110224463 phosphatidylinositol N-acetylglucosaminyltransferas...   343   5e-95
gi|23503283 TBC1 domain family, member 21 [Homo sapiens]               30   0.76 
gi|6912734 transportin 3 [Homo sapiens]                                30   0.99 
gi|196114970 protein tyrosine phosphatase, non-receptor type 12 ...    29   2.2  
gi|196114967 protein tyrosine phosphatase, non-receptor type 12 ...    29   2.2  
gi|196114951 protein tyrosine phosphatase, non-receptor type 12 ...    29   2.2  
gi|6912396 glyoxylate reductase/hydroxypyruvate reductase [Homo ...    28   4.9  
gi|194097398 protein tyrosine phosphatase, receptor type, G prec...    27   6.4  
gi|71902540 ataxia telangiectasia mutated isoform 1 [Homo sapiens]     27   8.4  
gi|4503509 eukaryotic translation initiation factor 3, subunit 1...    27   8.4  
gi|169218268 PREDICTED: similar to Serine-protein kinase ATM, pa...    27   8.4  

>gi|11863130 phosphatidylinositol N-acetylglucosaminyltransferase
           subunit A isoform 1 [Homo sapiens]
          Length = 484

 Score =  343 bits (879), Expect = 5e-95
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MAIVEAASCGLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAPE 60
           MAIVEAASCGLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAPE
Sbjct: 316 MAIVEAASCGLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAPE 375

Query: 61  NIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRLDRLISHCGPVTGYIFALLAVFN 120
           NIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRLDRLISHCGPVTGYIFALLAVFN
Sbjct: 376 NIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRLDRLISHCGPVTGYIFALLAVFN 435

Query: 121 FLFLIFLRWMTPDSIIDVAIDATGPRGAWTNNYSHSKRGGENNEISETR 169
           FLFLIFLRWMTPDSIIDVAIDATGPRGAWTNNYSHSKRGGENNEISETR
Sbjct: 436 FLFLIFLRWMTPDSIIDVAIDATGPRGAWTNNYSHSKRGGENNEISETR 484


>gi|110224463 phosphatidylinositol N-acetylglucosaminyltransferase
           subunit A isoform 3 [Homo sapiens]
          Length = 169

 Score =  343 bits (879), Expect = 5e-95
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MAIVEAASCGLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAPE 60
           MAIVEAASCGLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAPE
Sbjct: 1   MAIVEAASCGLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAPE 60

Query: 61  NIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRLDRLISHCGPVTGYIFALLAVFN 120
           NIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRLDRLISHCGPVTGYIFALLAVFN
Sbjct: 61  NIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRLDRLISHCGPVTGYIFALLAVFN 120

Query: 121 FLFLIFLRWMTPDSIIDVAIDATGPRGAWTNNYSHSKRGGENNEISETR 169
           FLFLIFLRWMTPDSIIDVAIDATGPRGAWTNNYSHSKRGGENNEISETR
Sbjct: 121 FLFLIFLRWMTPDSIIDVAIDATGPRGAWTNNYSHSKRGGENNEISETR 169


>gi|23503283 TBC1 domain family, member 21 [Homo sapiens]
          Length = 336

 Score = 30.4 bits (67), Expect = 0.76
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 46  KAIFQLKSGTLPAPENIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRLDRLI 102
           KA+ Q+     P  EN+H       T  N+A   +K+YD+  +  VL   KRL++++
Sbjct: 95  KALCQMYEKIQPLLENLHRNFTE--TRNNIARDIQKIYDKDPLGNVLIDKKRLEKIL 149


>gi|6912734 transportin 3 [Homo sapiens]
          Length = 923

 Score = 30.0 bits (66), Expect = 0.99
 Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 18/111 (16%)

Query: 3   IVEAASCGLQVVST-RVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAPEN 61
           ++ +  C  Q+ ST + G  P  + E ++ +     KS+       + ++  G +  PE 
Sbjct: 413 LIGSMECFAQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLVEVLEGVVRLPET 472

Query: 62  IHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRLDRLISHCGPVTGYI 112
           +H  V+  YT               S+E V  M + +DR      PV GY+
Sbjct: 473 VHTAVR--YT---------------SIELVGEMSEVVDRNPQFLDPVLGYL 506


>gi|196114970 protein tyrosine phosphatase, non-receptor type 12
           isoform 3 [Homo sapiens]
          Length = 650

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)

Query: 51  LKSGTLPAPENIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRL 98
           LK+G +P   N+ N+++   T R+ A +T++ Y+ V        +K+L
Sbjct: 121 LKAGKIPEEFNVFNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEKQL 168


>gi|196114967 protein tyrosine phosphatase, non-receptor type 12
           isoform 2 [Homo sapiens]
          Length = 661

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)

Query: 51  LKSGTLPAPENIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRL 98
           LK+G +P   N+ N+++   T R+ A +T++ Y+ V        +K+L
Sbjct: 132 LKAGKIPEEFNVFNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEKQL 179


>gi|196114951 protein tyrosine phosphatase, non-receptor type 12
           isoform 1 [Homo sapiens]
          Length = 780

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)

Query: 51  LKSGTLPAPENIHNIVKTFYTWRNVAERTEKVYDRVSVEAVLPMDKRL 98
           LK+G +P   N+ N+++   T R+ A +T++ Y+ V        +K+L
Sbjct: 251 LKAGKIPEEFNVFNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEKQL 298


>gi|6912396 glyoxylate reductase/hydroxypyruvate reductase [Homo
           sapiens]
          Length = 328

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 18/70 (25%)

Query: 3   IVEAASCGLQVVST------------------RVGGIPEVLPENLIILCEPSVKSLCEGL 44
           I++AA   L+V+ST                  RVG  P+VL +    L    + + C  L
Sbjct: 67  ILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRL 126

Query: 45  EKAIFQLKSG 54
            +AI ++K+G
Sbjct: 127 PEAIEEVKNG 136


>gi|194097398 protein tyrosine phosphatase, receptor type, G
           precursor [Homo sapiens]
          Length = 1445

 Score = 27.3 bits (59), Expect = 6.4
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 7/49 (14%)

Query: 70  YTWRNVAERTEKVYDRVSVEAVLPMDKRLDRLISHCGPVTGYIFALLAV 118
           Y+W    +  EK + + S       DK L   ISH  P + Y+F + AV
Sbjct: 385 YSWTKNEDEKEKTFTKDS-------DKDLKATISHVSPDSLYLFRVQAV 426


>gi|71902540 ataxia telangiectasia mutated isoform 1 [Homo sapiens]
          Length = 3056

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%)

Query: 10   GLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTL-PAPENIH---NI 65
            G Q+    +  +PE++ E L+ L EP+  S  +  +   F   SG L PAP   H   ++
Sbjct: 1329 GKQIDHLFISNLPEIVVELLMTLHEPANSSASQSTDLCDF---SGDLDPAPNPPHFPSHV 1385

Query: 66   VKTFYTWRNVAERTE 80
            +K  + + +   +T+
Sbjct: 1386 IKATFAYISNCHKTK 1400


>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
           theta, 150/170kDa [Homo sapiens]
          Length = 1382

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 17/47 (36%), Positives = 23/47 (48%)

Query: 6   AASCGLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLK 52
           A   GLQ   TR+G I +++  N++    P VK L   LE     LK
Sbjct: 356 ATLLGLQAPPTRIGLINDMVRFNVLQYVVPEVKDLYNWLEVEFNPLK 402


>gi|169218268 PREDICTED: similar to Serine-protein kinase ATM, partial
            [Homo sapiens]
          Length = 2934

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%)

Query: 10   GLQVVSTRVGGIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTL-PAPENIH---NI 65
            G Q+    +  +PE++ E L+ L EP+  S  +  +   F   SG L PAP   H   ++
Sbjct: 1207 GKQIDHLFISNLPEIVVELLMTLHEPANSSASQSTDLCDF---SGDLDPAPNPPHFPSHV 1263

Query: 66   VKTFYTWRNVAERTE 80
            +K  + + +   +T+
Sbjct: 1264 IKATFAYISNCHKTK 1278


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,340,428
Number of Sequences: 37866
Number of extensions: 243714
Number of successful extensions: 529
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 523
Number of HSP's gapped (non-prelim): 13
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.