Guide to the Human Genome
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Name: PIGA Sequence: fasta or formatted (484aa) NCBI GI: 11863130
Description:

phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform 1

Referenced in:

GPI Anchoring

Other entries for this name:
alt prot [169aa] phosphatidylinositol N-acetylglucosaminyltransferase subunit A is...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         28           2
 C cysteine            2.5         12           1
 D aspartate           3.9         19           1
 E glutamate           5.2         25           2
 F phenylalanine       4.3         21           2
 G glycine             6.4         31           2
 H histidine           3.9         19           1
 I isoleucine          7.6         37           2
 K lysine              3.7         18           1
 L leucine            10.3         50           2
 M methionine          1.9          9           1
 N asparagine          4.5         22           2
 P proline             4.3         21           1
 Q glutamine           1.9          9           1
 R arginine            6.6         32           2
 S serine              7.4         36           2
 T threonine           6.8         33           2
 V valine              8.7         42           3
 W tryptophan          0.6          3           1
 Y tyrosine            3.5         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol N-acetylglucosaminyltransferase... 
PIGA                  0.335   phosphatidylinositol N-acetylglucosaminyltransferas...
GLT1D1                0.008   glycosyltransferase 1 domain containing 1 
NBEA                  0.007   neurobeachin 
TBC1D21               0.005   TBC1 domain family, member 21 
TNPO3                 0.005   transportin 3 
NLRC4                 0.005   caspase recruitment domain protein 12 
KIAA1274              0.004   KIAA1274 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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