Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SLC25A33 Sequence: fasta or formatted (321aa) NCBI GI: 14150082
Description:

mitochondrial carrier protein MGC4399

Referenced in:

Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         29           4
 C cysteine            2.2          7           1
 D aspartate           0.3          1           1
 E glutamate           5.6         18           2
 F phenylalanine       5.3         17           2
 G glycine             8.7         28           2
 H histidine           1.2          4           1
 I isoleucine          6.2         20           2
 K lysine              5.3         17           2
 L leucine            10.0         32           2
 M methionine          2.2          7           1
 N asparagine          3.4         11           1
 P proline             3.7         12           1
 Q glutamine           4.7         15           2
 R arginine            5.9         19           1
 S serine              7.5         24           2
 T threonine           7.2         23           1
 V valine              6.2         20           1
 W tryptophan          0.3          1           1
 Y tyrosine            5.0         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial carrier protein MGC4399 
SLC25A36              0.570   solute carrier family 25, member 36 isoform a [Homo...
SLC25A36              0.559   solute carrier family 25, member 36 isoform b [Homo...
SLC25A32              0.139   solute carrier family 25, member 32 
SLC25A37              0.138   solute carrier family 25, member 37 
SLC25A12              0.136   solute carrier family 25, member 12 
SLC25A28              0.131   solute carrier family 25, member 28 
LOC100292202          0.126   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.126   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.126   solute carrier family 25, member 25 isoform c 
SLC25A25              0.126   solute carrier family 25, member 25 isoform a 
SLC25A25              0.126   solute carrier family 25, member 25 isoform d 
SLC25A25              0.126   solute carrier family 25, member 25 isoform b 
SLC25A41              0.123   solute carrier family 25, member 41 
SLC25A13              0.123   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.123   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A23              0.123   solute carrier family 25, member 23 
SLC25A20              0.110   carnitine/acylcarnitine translocase 
SLC25A24              0.108   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.108   solute carrier family 25 member 24 isoform 2 
SLC25A29              0.105   solute carrier family 25, member 29 
SLC25A21              0.100   solute carrier family 25 (mitochondrial oxodicarboxy...
SLC25A40              0.093   mitochondrial carrier family protein 
SLC25A39              0.090   solute carrier family 25, member 39 isoform b 
SLC25A19              0.090   solute carrier family 25, member 19 
SLC25A19              0.090   solute carrier family 25, member 19 
SLC25A19              0.090   solute carrier family 25, member 19 
SLC25A38              0.089   solute carrier family 25, member 38 
SLC25A39              0.085   solute carrier family 25, member 39 isoform a [Homo...
SLC25A14              0.085   solute carrier family 25, member 14 isoform UCP5L [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press