Search of human proteins with 148746216

Search of human proteins with 148746216

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148746216 lipocalin-interacting membrane receptor [Homo
sapiens]
         (489 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148746216 lipocalin-interacting membrane receptor [Homo sapiens]   966   0.0  
gi|21362112 limb region 1 protein [Homo sapiens]                      574   e-164
gi|10835267 membrane transport protein XK [Homo sapiens]               35   0.20 
gi|21450775 torsin A interacting protein 2 [Homo sapiens]              31   2.2  
gi|33598960 alpha-2B-adrenergic receptor [Homo sapiens]                30   6.5  
gi|32698688 citron [Homo sapiens]                                      30   6.5  
gi|241896889 cytochrome b, ascorbate dependent 3 isoform 2 [Homo...    29   8.5  
gi|241896875 cytochrome b, ascorbate dependent 3 isoform 1 [Homo...    29   8.5  
gi|241896864 cytochrome b, ascorbate dependent 3 isoform 2 [Homo...    29   8.5  
gi|155029529 vomeronasal 1 receptor 2 [Homo sapiens]                   29   8.5  

>gi|148746216 lipocalin-interacting membrane receptor [Homo sapiens]
          Length = 489

 Score =  966 bits (2497), Expect = 0.0
 Identities = 489/489 (100%), Positives = 489/489 (100%)

Query: 1   MEAPDYEVLSVREQLFHERIRECIISTLLFATLYILCHIFLTRFKKPAEFTTVDDEDATV 60
           MEAPDYEVLSVREQLFHERIRECIISTLLFATLYILCHIFLTRFKKPAEFTTVDDEDATV
Sbjct: 1   MEAPDYEVLSVREQLFHERIRECIISTLLFATLYILCHIFLTRFKKPAEFTTVDDEDATV 60

Query: 61  NKIALELCTFTLAIALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFS 120
           NKIALELCTFTLAIALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFS
Sbjct: 61  NKIALELCTFTLAIALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFS 120

Query: 121 NLSLIFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLLVLGMVWVASAIVDKNK 180
           NLSLIFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLLVLGMVWVASAIVDKNK
Sbjct: 121 NLSLIFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLLVLGMVWVASAIVDKNK 180

Query: 181 ANRESLYDFWEYYLPYLYSCISFLGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQ 240
           ANRESLYDFWEYYLPYLYSCISFLGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQ
Sbjct: 181 ANRESLYDFWEYYLPYLYSCISFLGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQ 240

Query: 241 LYCSAFEEAALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYP 300
           LYCSAFEEAALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYP
Sbjct: 241 LYCSAFEEAALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYP 300

Query: 301 LAMLCLLVLTGLSVLIVAIHILELLIDEAAMPRGMQGTSLGQVSFSKLGSFGAVIQVVLI 360
           LAMLCLLVLTGLSVLIVAIHILELLIDEAAMPRGMQGTSLGQVSFSKLGSFGAVIQVVLI
Sbjct: 301 LAMLCLLVLTGLSVLIVAIHILELLIDEAAMPRGMQGTSLGQVSFSKLGSFGAVIQVVLI 360

Query: 361 FYLMVSSVVGFYSSPLFRSLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDL 420
           FYLMVSSVVGFYSSPLFRSLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDL
Sbjct: 361 FYLMVSSVVGFYSSPLFRSLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDL 420

Query: 421 LGDFGRFNWLGNFYIVFLYNAAFAGLTTLCLVKTFTAAVRAELIRAFGLDRLPLPVSGFP 480
           LGDFGRFNWLGNFYIVFLYNAAFAGLTTLCLVKTFTAAVRAELIRAFGLDRLPLPVSGFP
Sbjct: 421 LGDFGRFNWLGNFYIVFLYNAAFAGLTTLCLVKTFTAAVRAELIRAFGLDRLPLPVSGFP 480

Query: 481 QASRKTQHQ 489
           QASRKTQHQ
Sbjct: 481 QASRKTQHQ 489


>gi|21362112 limb region 1 protein [Homo sapiens]
          Length = 490

 Score =  574 bits (1480), Expect = e-164
 Identities = 288/467 (61%), Positives = 364/467 (77%), Gaps = 3/467 (0%)

Query: 9   LSVREQLFHERIRECIISTLLFATLYILCHIFLTRFKKPAEFTTVDDEDATVNKIALELC 68
           +S REQ FH ++RE  I  LLFA LY++ +  +TR+K+ ++    +DEDA VN+I+L L 
Sbjct: 7   VSAREQHFHSQVRESTICFLLFAILYVVSYFIITRYKRKSD--EQEDEDAIVNRISLFLS 64

Query: 69  TFTLAIALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFSNLSLIFLM 128
           TFTLA++ GAVLLLPFSIISNE+LLS P+NYYIQWLNGSLIHGLWNL  LFSNL L  LM
Sbjct: 65  TFTLAVSAGAVLLLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCLFVLM 124

Query: 129 PFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLLVLGMVWVASAIVDKNKANRESLYD 188
           PFA+FF ESEGFAG +KG+  R+ ET+VML+LL LL+LG+VWVASA++D + A+ ESLYD
Sbjct: 125 PFAFFFLESEGFAGLKKGIRARILETLVMLLLLALLILGIVWVASALIDNDAASMESLYD 184

Query: 189 FWEYYLPYLYSCISFLGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQLYCSAFEE 248
            WE+YLPYLYSCIS +G LLLL+CTP+GL+RMF+V G+LLVKP +LEDL+EQ+Y    EE
Sbjct: 185 LWEFYLPYLYSCISLMGCLLLLLCTPVGLSRMFTVMGQLLVKPTILEDLDEQIYIITLEE 244

Query: 249 AALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYPLAMLCLLV 308
            AL RR+ N  S  +  ++  L +++  ++T +  LE+R+KASAW+RNL YP  M+ LL+
Sbjct: 245 EALQRRL-NGLSSSVEYNIMELEQELENVKTLKTKLERRKKASAWERNLVYPAVMVLLLI 303

Query: 309 LTGLSVLIVAIHILELLIDEAAMPRGMQGTSLGQVSFSKLGSFGAVIQVVLIFYLMVSSV 368
            T +SVL+VA +IL LL+DE AMP+G +G  +G  S S  G  GA ++++LIFYLMVSSV
Sbjct: 304 ETSISVLLVACNILCLLVDETAMPKGTRGPGIGNASLSTFGFVGAALEIILIFYLMVSSV 363

Query: 369 VGFYSSPLFRSLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDLLGDFGRFN 428
           VGFYS   F +  P+  DT MT+IIGNCV +LVLSSALPV SRTLG+TRFDLLGDFGRFN
Sbjct: 364 VGFYSLRFFGNFTPKKDDTTMTKIIGNCVSILVLSSALPVMSRTLGITRFDLLGDFGRFN 423

Query: 429 WLGNFYIVFLYNAAFAGLTTLCLVKTFTAAVRAELIRAFGLDRLPLP 475
           WLGNFYIV  YN  FA +TTLCLV+ FT+AVR EL +A GL +L LP
Sbjct: 424 WLGNFYIVLSYNLLFAIVTTLCLVRKFTSAVREELFKALGLHKLHLP 470


>gi|10835267 membrane transport protein XK [Homo sapiens]
          Length = 444

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 14/116 (12%)

Query: 113 WNLVFLFSNLSLIFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLLVLGMVWVA 172
           W +V +  N    FL P+  F+     F  + +  L RV  T+V L  LTLL  G+    
Sbjct: 236 WVVVIILINFFSFFLYPWILFWCSGSPFPENIEKALSRVGTTIV-LCFLTLLYTGINMFC 294

Query: 173 SAIVDKNKANRESLYDFWEYYLPYLYSCISFL--GVLLLL-----------VCTPL 215
            + V     + + +     +Y   +Y  I F+   +LLLL           VC PL
Sbjct: 295 WSAVQLKIDSPDLISKSHNWYQLLVYYMIRFIENAILLLLWYLFKTDIYMYVCAPL 350


>gi|21450775 torsin A interacting protein 2 [Homo sapiens]
          Length = 470

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 339 SLGQVSFSKLGSFGAVIQVVLIFYLMVSSVVGFYSSP 375
           ++ Q++     S+G VI VVL+  ++ SSV  +YSSP
Sbjct: 206 TMRQINKKGFWSYGPVILVVLVVAVVASSVNSYYSSP 242


>gi|33598960 alpha-2B-adrenergic receptor [Homo sapiens]
          Length = 450

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 4/70 (5%)

Query: 300 PLAMLCLLVLTGLSVLIVAIHILELLIDEAAMPRGMQGTSLGQVSF----SKLGSFGAVI 355
           P  + C+++   L   ++++  L    D+   PRG     L Q ++    S +GSF A  
Sbjct: 126 PRRIKCIILTVWLIAAVISLPPLIYKGDQGPQPRGRPQCKLNQEAWYILASSIGSFFAPC 185

Query: 356 QVVLIFYLMV 365
            ++++ YL +
Sbjct: 186 LIMILVYLRI 195


>gi|32698688 citron [Homo sapiens]
          Length = 2027

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 9/97 (9%)

Query: 194 LPYL-YSCISFLGVLLLLVCTPLGL---ARMFSVTGKLLVKPRLLEDLEEQLYCSAFEEA 249
           LP++ +S    LG+L        GL   A+  S+  KLL+K + L+D +++ +    E  
Sbjct: 414 LPFVGFSYSKALGILGRSESVVSGLDSPAKTSSMEKKLLIKSKELQDSQDKCHKMEQEMT 473

Query: 250 ALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEK 286
            L RR+    +     ++EL      A +TQR LLE+
Sbjct: 474 RLHRRVSEVEAVLSQKEVEL-----KASETQRSLLEQ 505


>gi|241896889 cytochrome b, ascorbate dependent 3 isoform 2 [Homo
           sapiens]
          Length = 242

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 3/107 (2%)

Query: 105 NGSLIHGLWNLVFLFSNLSLIFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLL 164
           NGS+    W+ V + + + ++F    +  +   + + G +  +  ++    + LM   L 
Sbjct: 38  NGSIYMFNWHPVLMVAGM-VVFYGGASLVYRLPQSWVGPK--LPWKLLHAALHLMAFVLT 94

Query: 165 VLGMVWVASAIVDKNKANRESLYDFWEYYLPYLYSCISFLGVLLLLV 211
           V+G+V V +       AN  SL+ +      +L++C  FLG  + L+
Sbjct: 95  VVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFLL 141


>gi|241896875 cytochrome b, ascorbate dependent 3 isoform 1 [Homo
           sapiens]
          Length = 259

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 3/107 (2%)

Query: 105 NGSLIHGLWNLVFLFSNLSLIFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLL 164
           NGS+    W+ V + + + ++F    +  +   + + G +  +  ++    + LM   L 
Sbjct: 55  NGSIYMFNWHPVLMVAGM-VVFYGGASLVYRLPQSWVGPK--LPWKLLHAALHLMAFVLT 111

Query: 165 VLGMVWVASAIVDKNKANRESLYDFWEYYLPYLYSCISFLGVLLLLV 211
           V+G+V V +       AN  SL+ +      +L++C  FLG  + L+
Sbjct: 112 VVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFLL 158


>gi|241896864 cytochrome b, ascorbate dependent 3 isoform 2 [Homo
           sapiens]
          Length = 242

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 3/107 (2%)

Query: 105 NGSLIHGLWNLVFLFSNLSLIFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLL 164
           NGS+    W+ V + + + ++F    +  +   + + G +  +  ++    + LM   L 
Sbjct: 38  NGSIYMFNWHPVLMVAGM-VVFYGGASLVYRLPQSWVGPK--LPWKLLHAALHLMAFVLT 94

Query: 165 VLGMVWVASAIVDKNKANRESLYDFWEYYLPYLYSCISFLGVLLLLV 211
           V+G+V V +       AN  SL+ +      +L++C  FLG  + L+
Sbjct: 95  VVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFLL 141


>gi|155029529 vomeronasal 1 receptor 2 [Homo sapiens]
          Length = 395

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 15/151 (9%)

Query: 310 TGLSVLIVAIHILELLIDEAAMPRGMQGTSL----GQVSFSKLGSFGAVIQVVLIFYLMV 365
           TGL VL+V +   +L    +     +   SL    G+     +G    + QVV +  L  
Sbjct: 46  TGLRVLVVVVPQTQLSFLSSLCLVSLFLHSLVSAHGEKPTKPVGLDPTLFQVV-VGILGN 104

Query: 366 SSVVGFYSSPLFRSLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDLLGDFG 425
            S++ +Y    FR  +PR  D  +  +      L++LS  +P    T GL  FD      
Sbjct: 105 FSLLYYYMFLYFRGYKPRSTDLILRHLTV-ADSLVILSKRIPETMATFGLKHFD------ 157

Query: 426 RFNWLGNFYIVFLYNAA-FAGLTTLCLVKTF 455
             N+ G  ++++ +       + + CL+  F
Sbjct: 158 --NYFGCKFLLYAHRVGRGVSIGSTCLLSVF 186


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.142    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,232,093
Number of Sequences: 37866
Number of extensions: 638536
Number of successful extensions: 1894
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1886
Number of HSP's gapped (non-prelim): 12
length of query: 489
length of database: 18,247,518
effective HSP length: 106
effective length of query: 383
effective length of database: 14,233,722
effective search space: 5451515526
effective search space used: 5451515526
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.