Guide to the Human Genome
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Name: CUTC Sequence: fasta or formatted (273aa) NCBI GI: 148596990
Description:

cutC copper transporter homolog

Referenced in:

Iron, Copper, and Arsenic Metabolism
Conservation of Stress Responses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         24           2
 C cysteine            2.6          7           1
 D aspartate           5.1         14           1
 E glutamate           6.2         17           1
 F phenylalanine       3.3          9           1
 G glycine             9.9         27           3
 H histidine           1.5          4           1
 I isoleucine          5.5         15           1
 K lysine              4.8         13           1
 L leucine             9.9         27           2
 M methionine          4.4         12           1
 N asparagine          2.2          6           1
 P proline             3.3          9           1
 Q glutamine           2.2          6           1
 R arginine            7.7         21           1
 S serine              8.8         24           2
 T threonine           4.8         13           2
 V valine              8.1         22           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cutC copper transporter homolog 
RXRB                  0.010   retinoid X receptor, beta 
DPYD                  0.010   dihydropyrimidine dehydrogenase isoform 1 
LOC100292278          0.008   PREDICTED: hypothetical protein 
LOC100291291          0.008   PREDICTED: hypothetical protein XP_002347579 
LOC100289356          0.008   PREDICTED: hypothetical protein XP_002343410 
CNTN2                 0.006   contactin 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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