Guide to the Human Genome
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Name: GPR18 Sequence: fasta or formatted (331aa) NCBI GI: 148235349
Description:

G protein-coupled receptor 18

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt mRNA [331aa] G protein-coupled receptor 18
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         18           2
 C cysteine            3.0         10           1
 D aspartate           3.0         10           1
 E glutamate           2.1          7           1
 F phenylalanine       7.3         24           3
 G glycine             3.0         10           1
 H histidine           1.2          4           1
 I isoleucine          9.4         31           3
 K lysine              5.7         19           2
 L leucine            13.3         44           4
 M methionine          4.2         14           2
 N asparagine          4.5         15           2
 P proline             4.2         14           1
 Q glutamine           2.1          7           1
 R arginine            3.9         13           2
 S serine              6.3         21           2
 T threonine           7.6         25           4
 V valine              6.9         23           1
 W tryptophan          1.5          5           1
 Y tyrosine            5.1         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 18 
GPR18                 1.000   G protein-coupled receptor 18 
GPR17                 0.174   G protein-coupled receptor 17 isoform b 
GPR17                 0.174   G protein-coupled receptor 17 isoform b 
GPR17                 0.174   G protein-coupled receptor 17 isoform a 
GPR17                 0.174   G protein-coupled receptor 17 isoform a 
LPAR6                 0.174   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.174   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.174   G-protein coupled purinergic receptor P2Y5 
LPAR4                 0.165   lysophosphatidic acid receptor 4 
GPR34                 0.165   G protein-coupled receptor 34 
GPR34                 0.165   G protein-coupled receptor 34 
OXGR1                 0.162   oxoglutarate (alpha-ketoglutarate) receptor 1 
GPR183                0.159   EBV-induced G protein-coupled receptor 2 
P2RY1                 0.153   purinergic receptor P2Y1 
CCR8                  0.148   chemokine (C-C motif) receptor 8 
CYSLTR2               0.146   cysteinyl leukotriene receptor 2 
F2RL1                 0.143   coagulation factor II (thrombin) receptor-like 1 pre...
APLNR                 0.140   apelin receptor 
CYSLTR1               0.140   cysteinyl leukotriene receptor 1 
LPAR5                 0.139   lysophosphatidic acid receptor 5 
LPAR5                 0.139   lysophosphatidic acid receptor 5 
CCR6                  0.137   chemokine (C-C motif) receptor 6 
CCR6                  0.137   chemokine (C-C motif) receptor 6 
CCR7                  0.137   chemokine (C-C motif) receptor 7 precursor 
P2RY8                 0.137   G-protein coupled purinergic receptor P2Y8 
OPRK1                 0.136   opioid receptor, kappa 1 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1B5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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