Search of human proteins with 9966899

Search of human proteins with 9966899

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|9966899 X antigen family, member 1D isoform 1a [Homo
sapiens]
         (146 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|9966899 X antigen family, member 1D isoform 1a [Homo sapiens]      311   2e-85
gi|147906278 X antigen family, member 1C isoform 2 [Homo sapiens]     311   2e-85
gi|148232092 X antigen family, member 1B isoform 2 [Homo sapiens]     311   2e-85
gi|147900714 X antigen family, member 1 isoform 2 [Homo sapiens]      311   2e-85
gi|147903922 X antigen family member 1E isoform 2 [Homo sapiens]      311   2e-85
gi|148228925 X antigen family, member 1C isoform 1 [Homo sapiens]     203   5e-53
gi|19747281 X antigen family, member 1D isoform 1c [Homo sapiens]     203   5e-53
gi|148225604 X antigen family, member 1B isoform 1 [Homo sapiens]     203   5e-53
gi|148231153 X antigen family, member 1 isoform 1 [Homo sapiens]      203   5e-53
gi|148229505 X antigen family member 1E isoform 1 [Homo sapiens]      203   5e-53
gi|147902978 X antigen family, member 1C isoform 3 [Homo sapiens]      65   2e-11
gi|148233064 X antigen family, member 1B isoform 3 [Homo sapiens]      65   2e-11
gi|148229995 X antigen family, member 1 isoform 3 [Homo sapiens]       65   2e-11
gi|19747279 X antigen family, member 1D isoform 1d [Homo sapiens]      65   2e-11
gi|148229981 X antigen family member 1E isoform 3 [Homo sapiens]       65   2e-11
gi|118601000 X antigen family, member 2-like [Homo sapiens]            39   0.001
gi|19747283 XAGE-2 protein [Homo sapiens]                              39   0.001
gi|19747271 XAGE-3 protein [Homo sapiens]                              36   0.010
gi|19747269 XAGE-3 protein [Homo sapiens]                              36   0.010
gi|19747273 X antigen family, member 5 [Homo sapiens]                  33   0.11 
gi|62988344 P antigen family, member 3 (prostate associated) [Ho...    31   0.43 
gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming...    30   0.95 
gi|5901986 G antigen, family C, 1 [Homo sapiens]                       28   2.1  
gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo s...    28   2.1  
gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo sa...    28   2.1  
gi|161019170 mucin 5AC [Homo sapiens]                                  28   2.8  
gi|169184025 PREDICTED: hypothetical protein [Homo sapiens]            28   2.8  
gi|169179740 PREDICTED: hypothetical protein [Homo sapiens]            28   2.8  
gi|169180137 PREDICTED: hypothetical protein [Homo sapiens]            28   2.8  
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]       28   2.8  

>gi|9966899 X antigen family, member 1D isoform 1a [Homo sapiens]
          Length = 146

 Score =  311 bits (796), Expect = 2e-85
 Identities = 146/146 (100%), Positives = 146/146 (100%)

Query: 1   MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS 60
           MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS
Sbjct: 1   MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS 60

Query: 61  PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG 120
           PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG
Sbjct: 61  PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG 120

Query: 121 SGVKVKIIPKEEHCKMPEAGEEQPQV 146
           SGVKVKIIPKEEHCKMPEAGEEQPQV
Sbjct: 121 SGVKVKIIPKEEHCKMPEAGEEQPQV 146


>gi|147906278 X antigen family, member 1C isoform 2 [Homo sapiens]
          Length = 146

 Score =  311 bits (796), Expect = 2e-85
 Identities = 146/146 (100%), Positives = 146/146 (100%)

Query: 1   MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS 60
           MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS
Sbjct: 1   MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS 60

Query: 61  PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG 120
           PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG
Sbjct: 61  PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG 120

Query: 121 SGVKVKIIPKEEHCKMPEAGEEQPQV 146
           SGVKVKIIPKEEHCKMPEAGEEQPQV
Sbjct: 121 SGVKVKIIPKEEHCKMPEAGEEQPQV 146


>gi|148232092 X antigen family, member 1B isoform 2 [Homo sapiens]
          Length = 146

 Score =  311 bits (796), Expect = 2e-85
 Identities = 146/146 (100%), Positives = 146/146 (100%)

Query: 1   MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS 60
           MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS
Sbjct: 1   MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS 60

Query: 61  PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG 120
           PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG
Sbjct: 61  PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG 120

Query: 121 SGVKVKIIPKEEHCKMPEAGEEQPQV 146
           SGVKVKIIPKEEHCKMPEAGEEQPQV
Sbjct: 121 SGVKVKIIPKEEHCKMPEAGEEQPQV 146


>gi|147900714 X antigen family, member 1 isoform 2 [Homo sapiens]
          Length = 146

 Score =  311 bits (796), Expect = 2e-85
 Identities = 146/146 (100%), Positives = 146/146 (100%)

Query: 1   MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS 60
           MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS
Sbjct: 1   MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS 60

Query: 61  PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG 120
           PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG
Sbjct: 61  PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG 120

Query: 121 SGVKVKIIPKEEHCKMPEAGEEQPQV 146
           SGVKVKIIPKEEHCKMPEAGEEQPQV
Sbjct: 121 SGVKVKIIPKEEHCKMPEAGEEQPQV 146


>gi|147903922 X antigen family member 1E isoform 2 [Homo sapiens]
          Length = 146

 Score =  311 bits (796), Expect = 2e-85
 Identities = 146/146 (100%), Positives = 146/146 (100%)

Query: 1   MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS 60
           MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS
Sbjct: 1   MLLWCPPQCACSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTAS 60

Query: 61  PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG 120
           PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG
Sbjct: 61  PRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLG 120

Query: 121 SGVKVKIIPKEEHCKMPEAGEEQPQV 146
           SGVKVKIIPKEEHCKMPEAGEEQPQV
Sbjct: 121 SGVKVKIIPKEEHCKMPEAGEEQPQV 146


>gi|148228925 X antigen family, member 1C isoform 1 [Homo sapiens]
          Length = 160

 Score =  203 bits (516), Expect = 5e-53
 Identities = 98/100 (98%), Positives = 98/100 (98%)

Query: 47  RHGGHTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK 106
           RH  HTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK
Sbjct: 61  RHERHTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK 120

Query: 107 SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 146
           SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV
Sbjct: 121 SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 160


>gi|19747281 X antigen family, member 1D isoform 1c [Homo sapiens]
          Length = 160

 Score =  203 bits (516), Expect = 5e-53
 Identities = 98/100 (98%), Positives = 98/100 (98%)

Query: 47  RHGGHTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK 106
           RH  HTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK
Sbjct: 61  RHERHTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK 120

Query: 107 SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 146
           SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV
Sbjct: 121 SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 160


>gi|148225604 X antigen family, member 1B isoform 1 [Homo sapiens]
          Length = 160

 Score =  203 bits (516), Expect = 5e-53
 Identities = 98/100 (98%), Positives = 98/100 (98%)

Query: 47  RHGGHTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK 106
           RH  HTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK
Sbjct: 61  RHERHTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK 120

Query: 107 SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 146
           SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV
Sbjct: 121 SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 160


>gi|148231153 X antigen family, member 1 isoform 1 [Homo sapiens]
          Length = 160

 Score =  203 bits (516), Expect = 5e-53
 Identities = 98/100 (98%), Positives = 98/100 (98%)

Query: 47  RHGGHTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK 106
           RH  HTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK
Sbjct: 61  RHERHTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK 120

Query: 107 SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 146
           SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV
Sbjct: 121 SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 160


>gi|148229505 X antigen family member 1E isoform 1 [Homo sapiens]
          Length = 160

 Score =  203 bits (516), Expect = 5e-53
 Identities = 98/100 (98%), Positives = 98/100 (98%)

Query: 47  RHGGHTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK 106
           RH  HTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK
Sbjct: 61  RHERHTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLRSQCATWKVICK 120

Query: 107 SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 146
           SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV
Sbjct: 121 SCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 160


>gi|147902978 X antigen family, member 1C isoform 3 [Homo sapiens]
          Length = 69

 Score = 65.1 bits (157), Expect = 2e-11
 Identities = 32/32 (100%), Positives = 32/32 (100%)

Query: 66 MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ 97
          MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ
Sbjct: 1  MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ 32


>gi|148233064 X antigen family, member 1B isoform 3 [Homo sapiens]
          Length = 69

 Score = 65.1 bits (157), Expect = 2e-11
 Identities = 32/32 (100%), Positives = 32/32 (100%)

Query: 66 MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ 97
          MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ
Sbjct: 1  MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ 32


>gi|148229995 X antigen family, member 1 isoform 3 [Homo sapiens]
          Length = 69

 Score = 65.1 bits (157), Expect = 2e-11
 Identities = 32/32 (100%), Positives = 32/32 (100%)

Query: 66 MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ 97
          MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ
Sbjct: 1  MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ 32


>gi|19747279 X antigen family, member 1D isoform 1d [Homo sapiens]
          Length = 69

 Score = 65.1 bits (157), Expect = 2e-11
 Identities = 32/32 (100%), Positives = 32/32 (100%)

Query: 66 MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ 97
          MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ
Sbjct: 1  MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ 32


>gi|148229981 X antigen family member 1E isoform 3 [Homo sapiens]
          Length = 69

 Score = 65.1 bits (157), Expect = 2e-11
 Identities = 32/32 (100%), Positives = 32/32 (100%)

Query: 66 MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ 97
          MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ
Sbjct: 1  MESPKKKNQQLKVGILHLGSRQKKIRIQLRSQ 32


>gi|118601000 X antigen family, member 2-like [Homo sapiens]
          Length = 111

 Score = 39.3 bits (90), Expect = 0.001
 Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 108 CISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 146
           C ++T G   + G+ VK KI+PK EH KMPEAGE + QV
Sbjct: 74  CQTKT-GDGCEGGTDVKGKILPKAEHFKMPEAGEGKSQV 111


>gi|19747283 XAGE-2 protein [Homo sapiens]
          Length = 111

 Score = 39.3 bits (90), Expect = 0.001
 Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 108 CISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 146
           C ++T G   + G+ VK KI+PK EH KMPEAGE + QV
Sbjct: 74  CQTKT-GDGCEGGTDVKGKILPKAEHFKMPEAGEGKSQV 111


>gi|19747271 XAGE-3 protein [Homo sapiens]
          Length = 111

 Score = 36.2 bits (82), Expect = 0.010
 Identities = 34/127 (26%), Positives = 49/127 (38%), Gaps = 20/127 (15%)

Query: 23  VWGTRRSCEPATR--VPEVWILSPLLRHGGHT-QTQNHTASPRSPVMESPKKKNQQLKVG 79
           +W  R +  P  R  VP   ++ P+L  G    Q +      R P     ++++Q    G
Sbjct: 2   IWRGRSTYRPRPRRSVPPPELIGPMLEPGDEEPQQEEPPTESRDPAPGQEREEDQ----G 57

Query: 80  ILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLGSGVKVKIIPKEEHCKMPEA 139
                    +  +Q  SQ  T             G     G   + KI+PK E  KMPE 
Sbjct: 58  AAETQVPDLEADLQELSQSKT-------------GGECGNGPDDQGKILPKSEQFKMPEG 104

Query: 140 GEEQPQV 146
           G+ QPQV
Sbjct: 105 GDRQPQV 111


>gi|19747269 XAGE-3 protein [Homo sapiens]
          Length = 111

 Score = 36.2 bits (82), Expect = 0.010
 Identities = 34/127 (26%), Positives = 49/127 (38%), Gaps = 20/127 (15%)

Query: 23  VWGTRRSCEPATR--VPEVWILSPLLRHGGHT-QTQNHTASPRSPVMESPKKKNQQLKVG 79
           +W  R +  P  R  VP   ++ P+L  G    Q +      R P     ++++Q    G
Sbjct: 2   IWRGRSTYRPRPRRSVPPPELIGPMLEPGDEEPQQEEPPTESRDPAPGQEREEDQ----G 57

Query: 80  ILHLGSRQKKIRIQLRSQCATWKVICKSCISQTPGINLDLGSGVKVKIIPKEEHCKMPEA 139
                    +  +Q  SQ  T             G     G   + KI+PK E  KMPE 
Sbjct: 58  AAETQVPDLEADLQELSQSKT-------------GGECGNGPDDQGKILPKSEQFKMPEG 104

Query: 140 GEEQPQV 146
           G+ QPQV
Sbjct: 105 GDRQPQV 111


>gi|19747273 X antigen family, member 5 [Homo sapiens]
          Length = 108

 Score = 32.7 bits (73), Expect = 0.11
 Identities = 14/24 (58%), Positives = 18/24 (75%)

Query: 123 VKVKIIPKEEHCKMPEAGEEQPQV 146
           V+ KI+PK E  KMPE GE +PQ+
Sbjct: 85  VQGKILPKSEQFKMPEGGEGKPQL 108


>gi|62988344 P antigen family, member 3 (prostate associated) [Homo
           sapiens]
          Length = 113

 Score = 30.8 bits (68), Expect = 0.43
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 110 SQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 146
           S+T G   D G  VK + +P  E  K+PEAGE QP V
Sbjct: 78  SKTGGERGD-GPNVKGEFLPNLEPVKIPEAGEGQPSV 113


>gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming
           sequence-like 1 [Homo sapiens]
          Length = 491

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 13/44 (29%), Positives = 19/44 (43%)

Query: 32  PATRVPEVWILSPLLRHGGHTQTQNHTASPRSPVMESPKKKNQQ 75
           P T +PE +I+ P   H  H   + H   P  P+   P +   Q
Sbjct: 212 PPTEIPERFIMPPDKHHMSHIPPKQHIMMPPPPLQHVPHEHYNQ 255


>gi|5901986 G antigen, family C, 1 [Homo sapiens]
          Length = 102

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)

Query: 120 GSGVKVKIIPKEEHCKMPEAGEEQP 144
           GS VK K  P  +H K  EAG+ QP
Sbjct: 78  GSDVKEKTPPNPKHAKTKEAGDGQP 102


>gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo
           sapiens]
          Length = 1235

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 35  RVPEVWILSPLLRHGGHTQTQNHTASPR--SPVMESPKKKNQ 74
           RVP  ++ +P++       T +  A PR   P  E+PKK ++
Sbjct: 914 RVPSPYVRTPVVESARPNSTSSREAEPRKGEPAYENPKKSSE 955


>gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo
           sapiens]
          Length = 1259

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 35  RVPEVWILSPLLRHGGHTQTQNHTASPR--SPVMESPKKKNQ 74
           RVP  ++ +P++       T +  A PR   P  E+PKK ++
Sbjct: 938 RVPSPYVRTPVVESARPNSTSSREAEPRKGEPAYENPKKSSE 979


>gi|161019170 mucin 5AC [Homo sapiens]
          Length = 6207

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 11   CSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTASPRS 63
            C+ G  PS P+    T  +  P++     WIL+ L      T++   TA+P S
Sbjct: 4194 CNYGHCPSTPA----TSSTATPSSTPGTTWILTKLTTTATTTESTGSTATPSS 4242



 Score = 28.1 bits (61), Expect = 2.8
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 11   CSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTASPRSPVMESPK 70
            C+ G  PS P+    T  +  P++     WIL+ L      T +   TA+P S    +P 
Sbjct: 4696 CNYGHCPSTPA----TSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPP 4751

Query: 71   KK 72
             K
Sbjct: 4752 PK 4753



 Score = 27.7 bits (60), Expect = 3.6
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 11   CSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTASPRS 63
            C+ G  PS P+    T  +  P++     WIL+ L      T++   TA+P S
Sbjct: 3047 CNYGHCPSTPA----TSSTAMPSSTPGTTWILTELTTTATTTESTGSTATPSS 3095


>gi|169184025 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 230

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 17/60 (28%), Positives = 26/60 (43%)

Query: 20  PSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTASPRSPVMESPKKKNQQLKVG 79
           PSP+     S +P +    VW   P L+   H  T  HT +P      S + ++  L+ G
Sbjct: 149 PSPLPAALESQKPNSAQLSVWRARPGLQAQIHVPTPEHTQTPPESETASGRLRSSGLRGG 208


>gi|169179740 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 230

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 17/60 (28%), Positives = 26/60 (43%)

Query: 20  PSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTASPRSPVMESPKKKNQQLKVG 79
           PSP+     S +P +    VW   P L+   H  T  HT +P      S + ++  L+ G
Sbjct: 149 PSPLPAALESQKPNSAQLSVWRARPGLQAQIHVPTPEHTQTPPESETASGRLRSSGLRGG 208


>gi|169180137 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 230

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 17/60 (28%), Positives = 26/60 (43%)

Query: 20  PSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTASPRSPVMESPKKKNQQLKVG 79
           PSP+     S +P +    VW   P L+   H  T  HT +P      S + ++  L+ G
Sbjct: 149 PSPLPAALESQKPNSAQLSVWRARPGLQAQIHVPTPEHTQTPPESETASGRLRSSGLRGG 208


>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
          Length = 5765

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 11   CSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTASPRS 63
            C+ G  PS P+    T  +  P++     WIL+ L      T++   TA+P S
Sbjct: 3669 CNYGHCPSTPA----TSSTATPSSTPGTTWILTKLTTTATTTESTGSTATPSS 3717



 Score = 28.1 bits (61), Expect = 2.8
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 11   CSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTASPRSPVMESPK 70
            C+ G  PS P+    T  +  P++     WIL+ L      T +   TA+P S    +P 
Sbjct: 4226 CNYGHCPSTPA----TSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPP 4281

Query: 71   KK 72
             K
Sbjct: 4282 PK 4283



 Score = 27.7 bits (60), Expect = 3.6
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 11   CSLGVFPSAPSPVWGTRRSCEPATRVPEVWILSPLLRHGGHTQTQNHTASPRS 63
            C+ G  PS P+    T  +  P++     WIL+ L      T++   TA+P S
Sbjct: 2412 CNYGHCPSTPA----TSSTAMPSSTPGTTWILTELTTTATTTESTGSTATPSS 2460


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,490,716
Number of Sequences: 37866
Number of extensions: 366070
Number of successful extensions: 1028
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 983
Number of HSP's gapped (non-prelim): 62
length of query: 146
length of database: 18,247,518
effective HSP length: 92
effective length of query: 54
effective length of database: 14,763,846
effective search space: 797247684
effective search space used: 797247684
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.