Guide to the Human Genome
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Name: C15orf24 Sequence: fasta or formatted (242aa) NCBI GI: 9910346
Description:

chromosome 15 open reading frame 24

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         12           3
 C cysteine            0.0          0           0
 D aspartate           5.0         12           1
 E glutamate           5.0         12           2
 F phenylalanine       4.5         11           2
 G glycine             9.5         23           2
 H histidine           1.2          3           1
 I isoleucine          3.3          8           1
 K lysine              5.8         14           1
 L leucine             8.3         20           6
 M methionine          5.4         13           3
 N asparagine          2.5          6           1
 P proline             6.6         16           2
 Q glutamine           1.7          4           1
 R arginine            5.8         14           2
 S serine             12.4         30           3
 T threonine           2.9          7           1
 V valine             11.2         27           2
 W tryptophan          1.7          4           1
 Y tyrosine            2.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromosome 15 open reading frame 24 
PIGT                  0.015   phosphatidylinositol glycan anchor biosynthesis, cla...
CCDC85C               0.011   coiled-coil domain containing 85C 
NOMO2                 0.011   nodal modulator 2 isoform 2 
NOMO2                 0.011   nodal modulator 2 isoform 1 
NOMO3                 0.011   nodal modulator 3 
NOMO1                 0.011   nodal modulator 1 
ARHGEF19              0.009   Rho guanine nucleotide exchange factor (GEF) 19 [Hom...
TCF21                 0.009   transcription factor 21 
TCF21                 0.009   transcription factor 21 
KLHDC10               0.009   kelch domain containing 10 
SRCAP                 0.009   Snf2-related CBP activator protein 
C1QB                  0.007   complement component 1, q subcomponent, B chain prec...
ITPKB                 0.007   1D-myo-inositol-trisphosphate 3-kinase B 
TEP1                  0.007   telomerase-associated protein 1 
DDX50                 0.007   nucleolar protein GU2 
ATAD2B                0.007   ATPase family, AAA domain containing 2B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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