Search of human proteins with 90963001

Search of human proteins with 90963001

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|90963001 hypothetical protein LOC170063 [Homo sapiens]
         (976 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|90963001 hypothetical protein LOC170063 [Homo sapiens]            1960   0.0  
gi|119703749 hydrocephalus inducing isoform a [Homo sapiens]           42   0.003
gi|46361983 hydrocephalus inducing isoform b [Homo sapiens]            42   0.003
gi|90669228 deleted in lung and esophageal cancer 1 isoform DLEC...    34   0.58 
gi|90669194 deleted in lung and esophageal cancer 1 isoform DLEC...    34   0.58 
gi|38016943 calcium release-activated calcium channel protein 1 ...    33   1.3  
gi|221139764 PHD and ring finger domains 1 [Homo sapiens]              32   2.2  
gi|66528888 Fanconi anemia complementation group D2 isoform b [H...    32   2.9  
gi|21361861 Fanconi anemia complementation group D2 isoform a [H...    32   2.9  
gi|56847626 sulfotransferase family, cytosolic, 1C, member 3 [Ho...    32   2.9  
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]         32   3.8  
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]         32   3.8  
gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]        32   3.8  
gi|58533172 zinc finger, matrin type 1 isoform 3 [Homo sapiens]        32   3.8  
gi|239753856 PREDICTED: hypothetical protein [Homo sapiens]            30   8.4  
gi|239748415 PREDICTED: hypothetical protein [Homo sapiens]            30   8.4  
gi|239742343 PREDICTED: hypothetical protein XP_002342497 [Homo ...    30   8.4  
gi|112363080 microtubule associated serine/threonine kinase 2 [H...    30   8.4  

>gi|90963001 hypothetical protein LOC170063 [Homo sapiens]
          Length = 976

 Score = 1960 bits (5077), Expect = 0.0
 Identities = 976/976 (100%), Positives = 976/976 (100%)

Query: 1   MNTQKGSLTINVHRGSLAMSIQRGSLVPRDMDSSGRDMQLRVIPAEVKFLDTMAGRVYRL 60
           MNTQKGSLTINVHRGSLAMSIQRGSLVPRDMDSSGRDMQLRVIPAEVKFLDTMAGRVYRL
Sbjct: 1   MNTQKGSLTINVHRGSLAMSIQRGSLVPRDMDSSGRDMQLRVIPAEVKFLDTMAGRVYRL 60

Query: 61  PITVHNICRWNQKIRFKEPVKPQFKLMLTSLDKELASGLQMTAMVEYHPDKDEDTFDRLL 120
           PITVHNICRWNQKIRFKEPVKPQFKLMLTSLDKELASGLQMTAMVEYHPDKDEDTFDRLL
Sbjct: 61  PITVHNICRWNQKIRFKEPVKPQFKLMLTSLDKELASGLQMTAMVEYHPDKDEDTFDRLL 120

Query: 121 ISIENKTTEIPLIGLIPSCQLEIESVVNFGTLVANSKVYSKEITITNHGKAPGIFKAEYH 180
           ISIENKTTEIPLIGLIPSCQLEIESVVNFGTLVANSKVYSKEITITNHGKAPGIFKAEYH
Sbjct: 121 ISIENKTTEIPLIGLIPSCQLEIESVVNFGTLVANSKVYSKEITITNHGKAPGIFKAEYH 180

Query: 181 GQLPILIFPTSGIVDAKSSMVIKVDFCADQPRIVDEEAIVILQGQPEMLLSIKAHVVEQI 240
           GQLPILIFPTSGIVDAKSSMVIKVDFCADQPRIVDEEAIVILQGQPEMLLSIKAHVVEQI
Sbjct: 181 GQLPILIFPTSGIVDAKSSMVIKVDFCADQPRIVDEEAIVILQGQPEMLLSIKAHVVEQI 240

Query: 241 IELLSMSSDRRLECIHFGPVFFGSSKIKHARVYNNSPEPINWVAIIQDDAVGEELGTDIQ 300
           IELLSMSSDRRLECIHFGPVFFGSSKIKHARVYNNSPEPINWVAIIQDDAVGEELGTDIQ
Sbjct: 241 IELLSMSSDRRLECIHFGPVFFGSSKIKHARVYNNSPEPINWVAIIQDDAVGEELGTDIQ 300

Query: 301 QRTDIALNNLTYIRKIKNIDTTIIISCLPNEGTLQPYQKTVITFCFTPKLMAVGKKDIGP 360
           QRTDIALNNLTYIRKIKNIDTTIIISCLPNEGTLQPYQKTVITFCFTPKLMAVGKKDIGP
Sbjct: 301 QRTDIALNNLTYIRKIKNIDTTIIISCLPNEGTLQPYQKTVITFCFTPKLMAVGKKDIGP 360

Query: 361 SYRQDYALFLRFESVGSKDGFLRDDDYKTIKSERFQKVELALTGTGLPVLLQFDPGPVLN 420
           SYRQDYALFLRFESVGSKDGFLRDDDYKTIKSERFQKVELALTGTGLPVLLQFDPGPVLN
Sbjct: 361 SYRQDYALFLRFESVGSKDGFLRDDDYKTIKSERFQKVELALTGTGLPVLLQFDPGPVLN 420

Query: 421 FKPCFMGERSEIQCIIKNQCELLPVTYHFKKTANFEIDPEKGKITGGGMVDVMCSFVPHQ 480
           FKPCFMGERSEIQCIIKNQCELLPVTYHFKKTANFEIDPEKGKITGGGMVDVMCSFVPHQ
Sbjct: 421 FKPCFMGERSEIQCIIKNQCELLPVTYHFKKTANFEIDPEKGKITGGGMVDVMCSFVPHQ 480

Query: 481 LGVFKVKQMIEIIGLVAEEDLQSLSVKSFHHVYLAFNSICKASTKKVVMKFDPGILPSIR 540
           LGVFKVKQMIEIIGLVAEEDLQSLSVKSFHHVYLAFNSICKASTKKVVMKFDPGILPSIR
Sbjct: 481 LGVFKVKQMIEIIGLVAEEDLQSLSVKSFHHVYLAFNSICKASTKKVVMKFDPGILPSIR 540

Query: 541 NPTGKFVVKDLAKRKNYAPVAMLQSAMTRTHNHRSCEEPVKDMLLAFPNDRAATIRSKDH 600
           NPTGKFVVKDLAKRKNYAPVAMLQSAMTRTHNHRSCEEPVKDMLLAFPNDRAATIRSKDH
Sbjct: 541 NPTGKFVVKDLAKRKNYAPVAMLQSAMTRTHNHRSCEEPVKDMLLAFPNDRAATIRSKDH 600

Query: 601 HKHFRPIFTKVPRFNYVNHDFAYTTFEKQQKKLHENYYAMYLKYLRSVRLQKKQAERERM 660
           HKHFRPIFTKVPRFNYVNHDFAYTTFEKQQKKLHENYYAMYLKYLRSVRLQKKQAERERM
Sbjct: 601 HKHFRPIFTKVPRFNYVNHDFAYTTFEKQQKKLHENYYAMYLKYLRSVRLQKKQAERERM 660

Query: 661 YSYDDTDIGLEPGSGLKSPSLSEAEIEEELSSAANSIRANRLLTTRGIASQEEESVRRKV 720
           YSYDDTDIGLEPGSGLKSPSLSEAEIEEELSSAANSIRANRLLTTRGIASQEEESVRRKV
Sbjct: 661 YSYDDTDIGLEPGSGLKSPSLSEAEIEEELSSAANSIRANRLLTTRGIASQEEESVRRKV 720

Query: 721 LKGLKSEPSTPQEKHDCSLMLTPKQIHQVIVGPSVLNFGNICVNSPNTHLLHVINMLPMH 780
           LKGLKSEPSTPQEKHDCSLMLTPKQIHQVIVGPSVLNFGNICVNSPNTHLLHVINMLPMH
Sbjct: 721 LKGLKSEPSTPQEKHDCSLMLTPKQIHQVIVGPSVLNFGNICVNSPNTHLLHVINMLPMH 780

Query: 781 VLLQLDTDLEELQKTNQFSYVILPTSSTYISMVFDSPTIGKFWKSFTFTVNNVPSGHILV 840
           VLLQLDTDLEELQKTNQFSYVILPTSSTYISMVFDSPTIGKFWKSFTFTVNNVPSGHILV
Sbjct: 781 VLLQLDTDLEELQKTNQFSYVILPTSSTYISMVFDSPTIGKFWKSFTFTVNNVPSGHILV 840

Query: 841 VAVVQPVTLELSSNELVLRPRGFFMKTCFRGTVRLYNRQNCCAQFQWQPVNTGRGIAFSI 900
           VAVVQPVTLELSSNELVLRPRGFFMKTCFRGTVRLYNRQNCCAQFQWQPVNTGRGIAFSI
Sbjct: 841 VAVVQPVTLELSSNELVLRPRGFFMKTCFRGTVRLYNRQNCCAQFQWQPVNTGRGIAFSI 900

Query: 901 CPAKGTVEAYSSLECEVTWQQGFSSPEEGEFILHVFQGNALKLKCVAHVIIFLEHGFCFE 960
           CPAKGTVEAYSSLECEVTWQQGFSSPEEGEFILHVFQGNALKLKCVAHVIIFLEHGFCFE
Sbjct: 901 CPAKGTVEAYSSLECEVTWQQGFSSPEEGEFILHVFQGNALKLKCVAHVIIFLEHGFCFE 960

Query: 961 GYEFVGYTLVYIVTYI 976
           GYEFVGYTLVYIVTYI
Sbjct: 961 GYEFVGYTLVYIVTYI 976


>gi|119703749 hydrocephalus inducing isoform a [Homo sapiens]
          Length = 5120

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 65/333 (19%), Positives = 133/333 (39%), Gaps = 35/333 (10%)

Query: 44  PAEVKFLDTMAGRVYRLPITVHNICRWNQKIRFKEPVKPQFKLML-TSLDKELASGLQMT 102
           P+E+ F +     VY +P+ + N  +  + ++  E   P FK++    +  ++A G+   
Sbjct: 102 PSEIIFQNYTPCEVYEVPLILRNNDKIPRLVKVVEESSPYFKVISPKDIGHKVAPGVPSI 161

Query: 103 AMVEYHPDKDEDTFDRLLISIENKTTEIPLIGLIPSCQLEIESVVNFGTLVANSKVYSKE 162
             + + P++++D    L    E +   +P+        L+    +NF T         K 
Sbjct: 162 FRILFTPEENKDYAHTLTCVTEREKFIVPIKARGARAILDFPDKLNFSTCPVKYST-QKI 220

Query: 163 ITITNHGKAPGIFKAEYHGQLPILIFPTSGIVDAKSSMVIKVDFCADQPRIVDEEA---I 219
           + + N G    +F  +     P  I P  G ++   SM ++V+F   +P+ V + +   I
Sbjct: 221 LLVRNIGNKNAVFHIK--TCRPFSIEPAIGTLNVGESMQLEVEF---EPQSVGDHSGRLI 275

Query: 220 VILQGQPEMLLSIKAHVVEQIIEL-----------LSMSSDRRLE-------CIHFGPVF 261
           V      ++ +S+    ++  I L           +S+++ R +          HF    
Sbjct: 276 VCYDTGEKVFVSLYGAAIDMNIRLDKNSLTIEKTYISLANQRTITIHNRSNIIAHFLWKV 335

Query: 262 FGSSKIKHARVYNNSPEPINWVAIIQDDAVGEELGTDIQQRTDIALNNLTYI--RKIKNI 319
           F + + +    Y    + I      + D   EE  TD   R  +++ + T+   R++   
Sbjct: 336 FATQQEEDREKYRACDDLIK-EEKDETDEFFEECITDPLLREHLSVLSRTFANQRRLVQG 394

Query: 320 DTTI----IISCLPNEGTLQPYQKTVITFCFTP 348
           D+ +    + +  P EG + P     IT  F P
Sbjct: 395 DSKLFFNNVFTVEPLEGDVWPNSSAEITVYFNP 427



 Score = 38.9 bits (89), Expect = 0.024
 Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 16/162 (9%)

Query: 189 PTSGIVDAKSSMVIKVDFCADQPRIVDEEAIVILQGQPE-MLLSIKAHVVEQIIELLSMS 247
           P  GI++      I++ F +      +EE +V + G PE + L+I+  V+          
Sbjct: 512 PKEGIIEPSGVQAIQISFSSTILGNFEEEFLVNVNGSPEPVKLTIRGCVIGPTFHF---- 567

Query: 248 SDRRLECIHFGPVFFGSSKIKHARVYNNSPEPINWVAIIQDDAVGEELGTDIQQRTDIAL 307
               +  +HFG V FG        + N S  P+ +   I  D +G +  +  +Q  D   
Sbjct: 568 ---NVPALHFGDVSFGFPHTLICSLNNTSLIPMTYKLRIPGDGLGHKSISYCEQHVDYKR 624

Query: 308 NNLT--YIRKIKNIDTTIIISCLPNEGTLQP--YQKTVITFC 345
            + T   I  +K  + TI   C    GT++P  +    +T C
Sbjct: 625 PSWTKEEISSMKPKEFTISPDC----GTIRPQGFAAIRVTLC 662


>gi|46361983 hydrocephalus inducing isoform b [Homo sapiens]
          Length = 1017

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 65/333 (19%), Positives = 133/333 (39%), Gaps = 35/333 (10%)

Query: 44  PAEVKFLDTMAGRVYRLPITVHNICRWNQKIRFKEPVKPQFKLML-TSLDKELASGLQMT 102
           P+E+ F +     VY +P+ + N  +  + ++  E   P FK++    +  ++A G+   
Sbjct: 102 PSEIIFQNYTPCEVYEVPLILRNNDKIPRLVKVVEESSPYFKVISPKDIGHKVAPGVPSI 161

Query: 103 AMVEYHPDKDEDTFDRLLISIENKTTEIPLIGLIPSCQLEIESVVNFGTLVANSKVYSKE 162
             + + P++++D    L    E +   +P+        L+    +NF T         K 
Sbjct: 162 FRILFTPEENKDYAHTLTCVTEREKFIVPIKARGARAILDFPDKLNFSTCPVKYST-QKI 220

Query: 163 ITITNHGKAPGIFKAEYHGQLPILIFPTSGIVDAKSSMVIKVDFCADQPRIVDEEA---I 219
           + + N G    +F  +     P  I P  G ++   SM ++V+F   +P+ V + +   I
Sbjct: 221 LLVRNIGNKNAVFHIK--TCRPFSIEPAIGTLNVGESMQLEVEF---EPQSVGDHSGRLI 275

Query: 220 VILQGQPEMLLSIKAHVVEQIIEL-----------LSMSSDRRLE-------CIHFGPVF 261
           V      ++ +S+    ++  I L           +S+++ R +          HF    
Sbjct: 276 VCYDTGEKVFVSLYGAAIDMNIRLDKNSLTIEKTYISLANQRTITIHNRSNIIAHFLWKV 335

Query: 262 FGSSKIKHARVYNNSPEPINWVAIIQDDAVGEELGTDIQQRTDIALNNLTYI--RKIKNI 319
           F + + +    Y    + I      + D   EE  TD   R  +++ + T+   R++   
Sbjct: 336 FATQQEEDREKYRACDDLIK-EEKDETDEFFEECITDPLLREHLSVLSRTFANQRRLVQG 394

Query: 320 DTTI----IISCLPNEGTLQPYQKTVITFCFTP 348
           D+ +    + +  P EG + P     IT  F P
Sbjct: 395 DSKLFFNNVFTVEPLEGDVWPNSSAEITVYFNP 427



 Score = 38.9 bits (89), Expect = 0.024
 Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 16/162 (9%)

Query: 189 PTSGIVDAKSSMVIKVDFCADQPRIVDEEAIVILQGQPE-MLLSIKAHVVEQIIELLSMS 247
           P  GI++      I++ F +      +EE +V + G PE + L+I+  V+          
Sbjct: 512 PKEGIIEPSGVQAIQISFSSTILGNFEEEFLVNVNGSPEPVKLTIRGCVIGPTFHF---- 567

Query: 248 SDRRLECIHFGPVFFGSSKIKHARVYNNSPEPINWVAIIQDDAVGEELGTDIQQRTDIAL 307
               +  +HFG V FG        + N S  P+ +   I  D +G +  +  +Q  D   
Sbjct: 568 ---NVPALHFGDVSFGFPHTLICSLNNTSLIPMTYKLRIPGDGLGHKSISYCEQHVDYKR 624

Query: 308 NNLT--YIRKIKNIDTTIIISCLPNEGTLQP--YQKTVITFC 345
            + T   I  +K  + TI   C    GT++P  +    +T C
Sbjct: 625 PSWTKEEISSMKPKEFTISPDC----GTIRPQGFAAIRVTLC 662


>gi|90669228 deleted in lung and esophageal cancer 1 isoform
           DLEC1-S3 [Homo sapiens]
          Length = 1778

 Score = 34.3 bits (77), Expect = 0.58
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 4/106 (3%)

Query: 49  FLDTMAGRVYRLPITVHNICRWNQKIRFKEPVKPQFKL---MLTSLDKELASGLQMTAMV 105
           F D   G VY + I + N    ++ +R   P  P F L   M       +A G+    +V
Sbjct: 381 FTDYEIGPVYEMVIALQNTTTTSRYLRVLPPSTPYFALGLGMFPGKGGMVAPGMTCQYIV 440

Query: 106 EYHPDKDEDTFDRLLISIEN-KTTEIPLIGLIPSCQLEIESVVNFG 150
           ++ PD   D  D +L+  ++  T  IPL    P   L +  V++ G
Sbjct: 441 QFFPDCLGDFDDFILVETQSAHTLLIPLQARRPPPVLTLSPVLDCG 486


>gi|90669194 deleted in lung and esophageal cancer 1 isoform
           DLEC1-N1 [Homo sapiens]
          Length = 1755

 Score = 34.3 bits (77), Expect = 0.58
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 4/106 (3%)

Query: 49  FLDTMAGRVYRLPITVHNICRWNQKIRFKEPVKPQFKL---MLTSLDKELASGLQMTAMV 105
           F D   G VY + I + N    ++ +R   P  P F L   M       +A G+    +V
Sbjct: 381 FTDYEIGPVYEMVIALQNTTTTSRYLRVLPPSTPYFALGLGMFPGKGGMVAPGMTCQYIV 440

Query: 106 EYHPDKDEDTFDRLLISIEN-KTTEIPLIGLIPSCQLEIESVVNFG 150
           ++ PD   D  D +L+  ++  T  IPL    P   L +  V++ G
Sbjct: 441 QFFPDCLGDFDDFILVETQSAHTLLIPLQARRPPPVLTLSPVLDCG 486


>gi|38016943 calcium release-activated calcium channel protein 1
           [Homo sapiens]
          Length = 301

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 72  QKIRFKEPVKPQFKLMLTSLDKELASGLQMTAMVEYHPDKDEDTFDRLLISIENKTTEIP 131
           Q + +++    + KL  +S    L SG  M AMVE   D D D    LLI+    TT + 
Sbjct: 72  QALSWRKLYLSRAKLKASSRTSALLSGFAMVAMVEVQLDADHDYPPGLLIAFSACTTVLV 131

Query: 132 LIGL----IPSCQL-EIESVVNFGTL 152
            + L    I +C L  IE+V N   L
Sbjct: 132 AVHLFALMISTCILPNIEAVSNVHNL 157


>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
          Length = 1648

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 681 LSEAEIEEELSSAANSIRA---NRLLTTRGIASQEEESVRRKVLKGLKSEPSTPQEKHDC 737
           L  + ++E + + A  +      R LT R  A ++ ++ RRK + G K  PS P  K   
Sbjct: 304 LGSSLLDEAIEAVATGLSTAVYQRPLTPRTPARRKRKTRRRKKVPGRKKTPSGPSAKSKS 363

Query: 738 SLMLTPKQIHQV 749
           S   + K+ H+V
Sbjct: 364 SATRSKKRQHRV 375


>gi|66528888 Fanconi anemia complementation group D2 isoform b [Homo
            sapiens]
          Length = 1451

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 458  DPEKGKITGGGMVDVMCSFVPHQLGVFKVKQMIEIIGLV----AEEDLQSLSVKSF-HHV 512
            D EK  I+   +  ++C ++ H   + K  + I  +G+     + +D  S +  +   H 
Sbjct: 1171 DKEKSNISNDQLHALLCIYLEHTESILKAIEEIAGVGVPELINSPKDASSSTFPTLTRHT 1230

Query: 513  YLAFNSICKASTKKVVMKFDPG 534
            ++ F  +  A  +K V K +PG
Sbjct: 1231 FVVFFRVMMAELEKTVKKIEPG 1252


>gi|21361861 Fanconi anemia complementation group D2 isoform a [Homo
            sapiens]
          Length = 1471

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 458  DPEKGKITGGGMVDVMCSFVPHQLGVFKVKQMIEIIGLV----AEEDLQSLSVKSF-HHV 512
            D EK  I+   +  ++C ++ H   + K  + I  +G+     + +D  S +  +   H 
Sbjct: 1171 DKEKSNISNDQLHALLCIYLEHTESILKAIEEIAGVGVPELINSPKDASSSTFPTLTRHT 1230

Query: 513  YLAFNSICKASTKKVVMKFDPG 534
            ++ F  +  A  +K V K +PG
Sbjct: 1231 FVVFFRVMMAELEKTVKKIEPG 1252


>gi|56847626 sulfotransferase family, cytosolic, 1C, member 3 [Homo
           sapiens]
          Length = 304

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 17/87 (19%)

Query: 423 PCFMGERSEIQCIIKNQCELLPVTYHFKKTANFEIDPE----------KGKITGGGMVDV 472
           P    E  +I  + +N  + L   YHF + A+F  DP+           GK+ GG   D 
Sbjct: 125 PSIWKENCKIVYVARNPKDCLVSYYHFHRMASFMPDPQNLEEFYEKFMSGKVVGGSWFD- 183

Query: 473 MCSFVPHQLGVFKVKQMIEIIGLVAEE 499
                 H  G +  K M  I+ L  E+
Sbjct: 184 ------HVKGWWAAKDMHRILYLFYED 204


>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
          Length = 2039

 Score = 31.6 bits (70), Expect = 3.8
 Identities = 42/195 (21%), Positives = 78/195 (40%), Gaps = 17/195 (8%)

Query: 550 DLAKRKNYAPVAMLQSAMTRTHNHRSCEEPVKDMLLAFPNDRAATIRSKDHHKHFRPIFT 609
           DL +  N     + +S+  ++  H+   +  KD  L F     A I+ +DH   F     
Sbjct: 556 DLVRYDNTESEFLPESSSVKSCKHKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDC 615

Query: 610 KVPRFN-----YVNHDFAYTTFEKQQ-KKLHENYYAMYLKYLRSVRLQK-----KQAERE 658
            + + +        H   +   EK++ KK  E     Y     +  LQ+     ++  +E
Sbjct: 616 TLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKTKDSAKELQRSVEFDREFWKE 675

Query: 659 RMYSYDDTD---IGLEPGS-GLKSPSLSEAEIEEELSSAANSIRANRLLTTR--GIASQE 712
             +  D+T+   + +E  S  L+  S  E  I+++ S+    +   R        I  + 
Sbjct: 676 NFFKSDETEDLFLNMEHESLTLEKKSKLEKNIKDDKSTKEKHVSKERNFKEERDKIKKES 735

Query: 713 EESVRRKVLKGLKSE 727
           E+S R + +K LK E
Sbjct: 736 EKSFREEKIKDLKEE 750


>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
          Length = 2062

 Score = 31.6 bits (70), Expect = 3.8
 Identities = 42/195 (21%), Positives = 78/195 (40%), Gaps = 17/195 (8%)

Query: 550 DLAKRKNYAPVAMLQSAMTRTHNHRSCEEPVKDMLLAFPNDRAATIRSKDHHKHFRPIFT 609
           DL +  N     + +S+  ++  H+   +  KD  L F     A I+ +DH   F     
Sbjct: 579 DLVRYDNTESEFLPESSSVKSCKHKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDC 638

Query: 610 KVPRFN-----YVNHDFAYTTFEKQQ-KKLHENYYAMYLKYLRSVRLQK-----KQAERE 658
            + + +        H   +   EK++ KK  E     Y     +  LQ+     ++  +E
Sbjct: 639 TLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKTKDSAKELQRSVEFDREFWKE 698

Query: 659 RMYSYDDTD---IGLEPGS-GLKSPSLSEAEIEEELSSAANSIRANRLLTTR--GIASQE 712
             +  D+T+   + +E  S  L+  S  E  I+++ S+    +   R        I  + 
Sbjct: 699 NFFKSDETEDLFLNMEHESLTLEKKSKLEKNIKDDKSTKEKHVSKERNFKEERDKIKKES 758

Query: 713 EESVRRKVLKGLKSE 727
           E+S R + +K LK E
Sbjct: 759 EKSFREEKIKDLKEE 773


>gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]
          Length = 638

 Score = 31.6 bits (70), Expect = 3.8
 Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 8/93 (8%)

Query: 649 RLQKKQAERERMYSYDDTDIGLEPGSGLKSPSLSEAEIEEE-LSSAANSIRANRLLTTRG 707
           R +K+Q++ +R  SY+DTD+        K  S+ + + EE+ +  ++  ++  +   +  
Sbjct: 551 RPEKEQSKHKRKKSYEDTDLD-------KDKSIRQRKREEDRVKVSSGKLKHRKKKKSHD 603

Query: 708 IASQEEESVRRKVLKGLKSEPSTPQEKHDCSLM 740
           + S++EE   RK  K    E +  +   D S++
Sbjct: 604 VPSEKEERKHRKEKKKSVEERTEEEMLWDESIL 636


>gi|58533172 zinc finger, matrin type 1 isoform 3 [Homo sapiens]
          Length = 467

 Score = 31.6 bits (70), Expect = 3.8
 Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 8/93 (8%)

Query: 649 RLQKKQAERERMYSYDDTDIGLEPGSGLKSPSLSEAEIEEE-LSSAANSIRANRLLTTRG 707
           R +K+Q++ +R  SY+DTD+        K  S+ + + EE+ +  ++  ++  +   +  
Sbjct: 380 RPEKEQSKHKRKKSYEDTDLD-------KDKSIRQRKREEDRVKVSSGKLKHRKKKKSHD 432

Query: 708 IASQEEESVRRKVLKGLKSEPSTPQEKHDCSLM 740
           + S++EE   RK  K    E +  +   D S++
Sbjct: 433 VPSEKEERKHRKEKKKSVEERTEEEMLWDESIL 465


>gi|239753856 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 208

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 673 GSGLKSPSLSEAEIEEELSSAANSIRANRLLTTRGIASQEEESVRRKVLKGLKSEPSTPQ 732
           G G ++PS S++     ++  A  +R  RL      A +E E   R+VL+G +  P  PQ
Sbjct: 31  GRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGE---REVLRGQRESPPPPQ 87


>gi|239748415 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 208

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 673 GSGLKSPSLSEAEIEEELSSAANSIRANRLLTTRGIASQEEESVRRKVLKGLKSEPSTPQ 732
           G G ++PS S++     ++  A  +R  RL      A +E E   R+VL+G +  P  PQ
Sbjct: 31  GRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGE---REVLRGQRESPPPPQ 87


>gi|239742343 PREDICTED: hypothetical protein XP_002342497 [Homo
           sapiens]
          Length = 208

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 673 GSGLKSPSLSEAEIEEELSSAANSIRANRLLTTRGIASQEEESVRRKVLKGLKSEPSTPQ 732
           G G ++PS S++     ++  A  +R  RL      A +E E   R+VL+G +  P  PQ
Sbjct: 31  GRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRDPPADREGE---REVLRGQRESPPPPQ 87


>gi|112363080 microtubule associated serine/threonine kinase 2 [Homo
            sapiens]
          Length = 1798

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 17/110 (15%)

Query: 658  ERMYSYDDTDIGLEPGS-------GLKSPSLSEAEIEEELSSAANSIRANRLLTTRGIAS 710
            E+    D+  +G   GS       G  +  L+E    + +S  A     +RLL+      
Sbjct: 979  EQRPKLDEEAVGRSSGSSPAMETRGRGTSQLAEGATAKAISDLAVRRARHRLLS----GD 1034

Query: 711  QEEESVRRKVLKGLKSEPST------PQEKHDCSLMLTPKQIHQVIVGPS 754
              E+   R V K +KS  +T      P E H CS + +P   H     PS
Sbjct: 1035 STEKRTARPVNKVIKSASATALSLLIPSEHHTCSPLASPMSPHSQSSNPS 1084


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,324,451
Number of Sequences: 37866
Number of extensions: 1631584
Number of successful extensions: 3482
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3447
Number of HSP's gapped (non-prelim): 51
length of query: 976
length of database: 18,247,518
effective HSP length: 112
effective length of query: 864
effective length of database: 14,006,526
effective search space: 12101638464
effective search space used: 12101638464
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.