Search of human proteins with 8923530

Search of human proteins with 8923530

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8923530 nicotinamide riboside kinase 1 isoform 1 [Homo
sapiens]
         (199 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8923530 nicotinamide riboside kinase 1 isoform 1 [Homo sapiens]    410   e-115
gi|189027124 nicotinamide riboside kinase 1 isoform 2 [Homo sapi...   343   7e-95
gi|24762248 integrin beta 1 binding protein 3 [Homo sapiens]          216   8e-57
gi|119226227 NEDD4 binding protein 2-like 1 isoform 2 [Homo sapi...    37   0.011
gi|119226224 NEDD4 binding protein 2-like 1 isoform 1 [Homo sapi...    37   0.011
gi|209863022 uridine-cytidine kinase 1 isoform b [Homo sapiens]        35   0.032
gi|13899253 uridine-cytidine kinase 1 isoform a [Homo sapiens]         35   0.042
gi|57863312 uridine-cytidine kinase 1-like 1 [Homo sapiens]            33   0.16 
gi|31742492 Nedd4 binding protein 2 [Homo sapiens]                     32   0.27 
gi|18699734 uridine-cytidine kinase 2 [Homo sapiens]                   30   1.8  
gi|189458898 postmeiotic segregation 1 isoform c [Homo sapiens]        28   3.9  
gi|149193331 tripartite motif protein 15 [Homo sapiens]                28   5.1  
gi|241982689 ADP-ribosylation factor-like 13 isoform b [Homo sap...    27   8.8  
gi|241982687 ADP-ribosylation factor-like 13 isoform a [Homo sap...    27   8.8  
gi|124248533 ADP-ribosylation factor-like 13 isoform a [Homo sap...    27   8.8  
gi|7656971 phosphonoformate immuno-associated protein 5 isoform ...    27   8.8  

>gi|8923530 nicotinamide riboside kinase 1 isoform 1 [Homo sapiens]
          Length = 199

 Score =  410 bits (1053), Expect = e-115
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA 60
           MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA
Sbjct: 1   MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA 60

Query: 61  LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI 120
           LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI
Sbjct: 61  LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI 120

Query: 121 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ 180
           PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ
Sbjct: 121 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ 180

Query: 181 VYEDLIQELAKQKCLQVTA 199
           VYEDLIQELAKQKCLQVTA
Sbjct: 181 VYEDLIQELAKQKCLQVTA 199


>gi|189027124 nicotinamide riboside kinase 1 isoform 2 [Homo
           sapiens]
          Length = 175

 Score =  343 bits (879), Expect = 7e-95
 Identities = 174/199 (87%), Positives = 175/199 (87%), Gaps = 24/199 (12%)

Query: 1   MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA 60
           MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA
Sbjct: 1   MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA 60

Query: 61  LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI 120
           LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNY               
Sbjct: 61  LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNY--------------- 105

Query: 121 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ 180
                    +TRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ
Sbjct: 106 ---------NTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ 156

Query: 181 VYEDLIQELAKQKCLQVTA 199
           VYEDLIQELAKQKCLQVTA
Sbjct: 157 VYEDLIQELAKQKCLQVTA 175


>gi|24762248 integrin beta 1 binding protein 3 [Homo sapiens]
          Length = 230

 Score =  216 bits (551), Expect = 8e-57
 Identities = 108/189 (57%), Positives = 135/189 (71%), Gaps = 5/189 (2%)

Query: 5   IIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEALNME 64
           I+GI G+TN GKTTL  +L + LPNC VI QDDFFKP+ +I   ++GF Q+DVLE+L+ME
Sbjct: 4   IVGIGGMTNGGKTTLTNSLLRALPNCCVIHQDDFFKPQDQIAVGEDGFKQWDVLESLDME 63

Query: 65  KMMSAISCWMES----ARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI 120
            M+  +  W+ S    AR   VS   E A +  IL++EGFLL++YKPL  +++R YFLT+
Sbjct: 64  AMLDTVQAWLSSPQKFARAHGVSVQPE-ASDTHILLLEGFLLYSYKPLVDLYSRRYFLTV 122

Query: 121 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ 180
           PYEECK RRSTR Y  PD PG FDGHVWPMY KYRQEM+    EVVYLDG KS E+LF +
Sbjct: 123 PYEECKWRRSTRNYTVPDPPGLFDGHVWPMYQKYRQEMEANGVEVVYLDGMKSREELFRE 182

Query: 181 VYEDLIQEL 189
           V ED+   L
Sbjct: 183 VLEDIQNSL 191


>gi|119226227 NEDD4 binding protein 2-like 1 isoform 2 [Homo
          sapiens]
          Length = 173

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 8  ISGVTNSGKTTLAKNLQKHLPNCSVISQDDFF 39
          + G+  SGKTTLA+ LQ   P   + S DDFF
Sbjct: 47 LRGLPGSGKTTLARQLQHDFPRALIFSTDDFF 78


>gi|119226224 NEDD4 binding protein 2-like 1 isoform 1 [Homo
          sapiens]
          Length = 243

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 8  ISGVTNSGKTTLAKNLQKHLPNCSVISQDDFF 39
          + G+  SGKTTLA+ LQ   P   + S DDFF
Sbjct: 47 LRGLPGSGKTTLARQLQHDFPRALIFSTDDFF 78


>gi|209863022 uridine-cytidine kinase 1 isoform b [Homo sapiens]
          Length = 201

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 20/152 (13%)

Query: 2   KTFIIGISGVTNSGKTTLAKNLQKHLPNCSV---------ISQDDFFKPESEIETDK--N 50
           + F+IG+SG T SGK+T+ + + + L    V         +SQD F+K  +  +  K   
Sbjct: 22  RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALK 81

Query: 51  GFLQYDVLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIP---------ILIIEGFL 101
           G   +D  +A + + M   +   +E     V + D  +   +P         +++ EG L
Sbjct: 82  GQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGIL 141

Query: 102 LFNYKPLDTIWNRSYFLTIPYEECKRRRSTRV 133
           +F  + +  +++   F+    +    RR   V
Sbjct: 142 VFYSQEIRDMFHLRLFVDTDSDVRLSRRDKEV 173


>gi|13899253 uridine-cytidine kinase 1 isoform a [Homo sapiens]
          Length = 277

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 20/151 (13%)

Query: 2   KTFIIGISGVTNSGKTTLAKNLQKHLPNCSV---------ISQDDFFKPESEIETDK--N 50
           + F+IG+SG T SGK+T+ + + + L    V         +SQD F+K  +  +  K   
Sbjct: 22  RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALK 81

Query: 51  GFLQYDVLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIP---------ILIIEGFL 101
           G   +D  +A + + M   +   +E     V + D  +   +P         +++ EG L
Sbjct: 82  GQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGIL 141

Query: 102 LFNYKPLDTIWNRSYFLTIPYEECKRRRSTR 132
           +F  + +  +++   F+    +    RR  R
Sbjct: 142 VFYSQEIRDMFHLRLFVDTDSDVRLSRRVLR 172


>gi|57863312 uridine-cytidine kinase 1-like 1 [Homo sapiens]
          Length = 548

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 13/130 (10%)

Query: 2   KTFIIGISGVTNSGKTTLAKNLQKHL--PNCSVISQDDFFK--PESEIETDKNGFLQYDV 57
           + F IG+ G + SGKTT+A+ + + L  P   ++S D F+K   E + E   +    +D 
Sbjct: 97  EAFAIGLGGGSASGKTTVARMIIEALDVPWVVLLSMDSFYKVLTEQQQEQAAHNNFNFDH 156

Query: 58  LEALNMEKMMSAISCWMESARHSVV---------STDQESAEEIPILIIEGFLLFNYKPL 108
            +A + + ++S +    +     V            D ++     ++I EG + F  K L
Sbjct: 157 PDAFDFDLIISTLKKLKQGKSVKVPIYDFTTHSRKKDWKTLYGANVIIFEGIMAFADKTL 216

Query: 109 DTIWNRSYFL 118
             + +   F+
Sbjct: 217 LELLDMKIFV 226


>gi|31742492 Nedd4 binding protein 2 [Homo sapiens]
          Length = 1770

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 14/44 (31%), Positives = 27/44 (61%)

Query: 5   IIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETD 48
           ++ + G+  SGK+ LA+ LQ+  P+  ++S DD+F    + + D
Sbjct: 442 LVLLRGLPGSGKSFLARTLQEDNPSGVILSTDDYFYINGQYQFD 485


>gi|18699734 uridine-cytidine kinase 2 [Homo sapiens]
          Length = 261

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 20/149 (13%)

Query: 4   FIIGISGVTNSGKTTLAKNLQKHL---------PNCSVISQDDFFKPESEIETDK--NGF 52
           F+IG+SG T SGK+++   + + L             ++SQD F++  +  +  K   G 
Sbjct: 21  FLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFYRVLTSEQKAKALKGQ 80

Query: 53  LQYDVLEALNMEKMMSAISCWMESARHSVV-------STDQESAEEIP--ILIIEGFLLF 103
             +D  +A + E ++  +    E     +        S  +E+    P  +++ EG L F
Sbjct: 81  FNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILAF 140

Query: 104 NYKPLDTIWNRSYFLTIPYEECKRRRSTR 132
             + +  ++    F+    +    RR  R
Sbjct: 141 YSQEVRDLFQMKLFVDTDADTRLSRRVLR 169


>gi|189458898 postmeiotic segregation 1 isoform c [Homo sapiens]
          Length = 770

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 20/98 (20%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 27  LPNCSVISQDDFFKPESEIETDKNGFLQYDVLEALNMEKMMSAISCWMESAR-HSVVSTD 85
           +P    +++D   K  + I+        YD+L    ++K MSA + +++  R   ++   
Sbjct: 535 IPEQMNLNEDSCNKKSNVIDNKSGKVTAYDLLSNRVIKKPMSASALFVQDHRPQFLIENP 594

Query: 86  QESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTIPYE 123
           + S E+  + I E +   + +    ++N S++L + Y+
Sbjct: 595 KTSLEDATLQIEELWKTLSEEEKLNLFNGSHYLDVLYK 632


>gi|149193331 tripartite motif protein 15 [Homo sapiens]
          Length = 465

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 15/70 (21%)

Query: 141 GYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQV---------------YEDL 185
           G+ D  + P   + R  ++ ++ E   ++  K +ED  LQV               +E L
Sbjct: 117 GFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERL 176

Query: 186 IQELAKQKCL 195
            QEL +Q+CL
Sbjct: 177 QQELEQQRCL 186


>gi|241982689 ADP-ribosylation factor-like 13 isoform b [Homo
          sapiens]
          Length = 256

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/24 (54%), Positives = 16/24 (66%)

Query: 6  IGISGVTNSGKTTLAKNLQKHLPN 29
          I I G+ NSGKT L +  QK LP+
Sbjct: 24 IPIIGLNNSGKTVLVEAFQKLLPS 47


>gi|241982687 ADP-ribosylation factor-like 13 isoform a [Homo
          sapiens]
          Length = 290

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/24 (54%), Positives = 16/24 (66%)

Query: 6  IGISGVTNSGKTTLAKNLQKHLPN 29
          I I G+ NSGKT L +  QK LP+
Sbjct: 24 IPIIGLNNSGKTVLVEAFQKLLPS 47


>gi|124248533 ADP-ribosylation factor-like 13 isoform a [Homo
          sapiens]
          Length = 290

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/24 (54%), Positives = 16/24 (66%)

Query: 6  IGISGVTNSGKTTLAKNLQKHLPN 29
          I I G+ NSGKT L +  QK LP+
Sbjct: 24 IPIIGLNNSGKTVLVEAFQKLLPS 47


>gi|7656971 phosphonoformate immuno-associated protein 5 isoform 2
           [Homo sapiens]
          Length = 583

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/39 (35%), Positives = 23/39 (58%)

Query: 1   MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFF 39
           ++  +I + G+  SGKTTL++ L     +  V S DD+F
Sbjct: 400 LQKLLILLRGLPGSGKTTLSRILLGQNRDGIVFSTDDYF 438


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,592,404
Number of Sequences: 37866
Number of extensions: 319048
Number of successful extensions: 896
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 876
Number of HSP's gapped (non-prelim): 21
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.