Guide to the Human Genome
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Name: KLHDC8B Sequence: fasta or formatted (354aa) NCBI GI: 27734909
Description:

kelch domain containing 8B

Referenced in:

Kelch Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.9         42           3
 C cysteine            2.5          9           1
 D aspartate           3.7         13           1
 E glutamate           4.2         15           1
 F phenylalanine       4.0         14           1
 G glycine            11.9         42           3
 H histidine           2.5          9           1
 I isoleucine          1.1          4           1
 K lysine              1.4          5           1
 L leucine             9.9         35           2
 M methionine          3.4         12           1
 N asparagine          1.1          4           1
 P proline             7.6         27           2
 Q glutamine           4.0         14           2
 R arginine            7.6         27           3
 S serine              5.9         21           2
 T threonine           4.8         17           1
 V valine              8.8         31           2
 W tryptophan          2.0          7           1
 Y tyrosine            1.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kelch domain containing 8B 
KLHDC8A               0.445   kelch domain containing 8A 
KLHL8                 0.107   kelch-like 8 
KLHL12                0.104   kelch-like 12 
KLHL18                0.099   kelch-like 18 
KLHL3                 0.092   kelch-like 3 
KLHL17                0.091   kelch-like 17 
KLHL2                 0.088   kelch-like 2, Mayven isoform 3 
KLHL2                 0.088   kelch-like 2, Mayven isoform 2 
KLHL2                 0.088   kelch-like 2, Mayven isoform 1 
IPP                   0.087   intracisternal A particle-promoted polypeptide isofor...
IPP                   0.087   intracisternal A particle-promoted polypeptide isof...
KLHL5                 0.087   kelch-like 5 isoform 3 
KLHL5                 0.087   kelch-like 5 isoform 2 
KLHL5                 0.087   kelch-like 5 isoform 1 
IVNS1ABP              0.087   influenza virus NS1A binding protein 
KLHL4                 0.084   kelch-like 4 isoform 2 
KLHL4                 0.084   kelch-like 4 isoform 1 
KEAP1                 0.084   kelch-like ECH-associated protein 1 
KEAP1                 0.084   kelch-like ECH-associated protein 1 
KLHL20                0.084   kelch-like 20 
KBTBD10               0.082   kelch repeat and BTB (POZ) domain containing 10 [Hom...
KLHL1                 0.081   kelch-like 1 protein 
KLHL28                0.081   BTB (POZ) domain containing 5 
KLHL10                0.080   kelch-like 10 
KLHL32                0.071   kelch-like 32 
KLHL14                0.070   kelch-like 14 
KLHL29                0.070   PREDICTED: kelch-like 29 (Drosophila) 
KLHL29                0.070   PREDICTED: kelch repeat and BTB (POZ) domain contai...
KLHL36                0.068   kelch-like 36 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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