Search of human proteins with 8922097

Search of human proteins with 8922097

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8922097 centromere protein N isoform 3 [Homo sapiens]
         (204 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8922097 centromere protein N isoform 3 [Homo sapiens]              412   e-115
gi|154800485 centromere protein N isoform 1 [Homo sapiens]            362   e-100
gi|154800483 centromere protein N isoform 2 [Homo sapiens]            362   e-100
gi|154350241 brefeldin A-inhibited guanine nucleotide-exchange p...    30   1.4  
gi|205360947 microtubule associated monoxygenase, calponin and L...    29   2.4  
gi|226530313 microtubule associated monoxygenase, calponin and L...    29   2.4  
gi|239755296 PREDICTED: similar to hCG1644292 [Homo sapiens]           28   4.1  
gi|239749791 PREDICTED: similar to hCG1644292 [Homo sapiens]           28   4.1  
gi|34452732 phosphatidylinositol-3,4,5-trisphosphate-dependent R...    28   5.4  
gi|21396500 HIRA interacting protein 3 [Homo sapiens]                  28   5.4  
gi|209977097 tripartite motif-containing 66 [Homo sapiens]             28   5.4  
gi|40254871 transmembrane protease, serine 11E [Homo sapiens]          28   5.4  
gi|153791781 transmembrane protease, serine 11E2 [Homo sapiens]        28   5.4  
gi|194394141 nucleolar preribosomal-associated protein 1 [Homo s...    28   7.1  
gi|194239713 laeverin [Homo sapiens]                                   28   7.1  

>gi|8922097 centromere protein N isoform 3 [Homo sapiens]
          Length = 204

 Score =  412 bits (1058), Expect = e-115
 Identities = 204/204 (100%), Positives = 204/204 (100%)

Query: 1   MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKR 60
           MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKR
Sbjct: 1   MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKR 60

Query: 61  ASISDAALLDIIYMQFHQHQKVWDVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVT 120
           ASISDAALLDIIYMQFHQHQKVWDVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVT
Sbjct: 61  ASISDAALLDIIYMQFHQHQKVWDVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVT 120

Query: 121 VSFRETEENAVWIRIAWGTQYTKPNQYKPTYVVYYSQTPYAFTSSSMLRRNTPLLGQELE 180
           VSFRETEENAVWIRIAWGTQYTKPNQYKPTYVVYYSQTPYAFTSSSMLRRNTPLLGQELE
Sbjct: 121 VSFRETEENAVWIRIAWGTQYTKPNQYKPTYVVYYSQTPYAFTSSSMLRRNTPLLGQELE 180

Query: 181 ATGKIYLRQEEIILDITEMKKACN 204
           ATGKIYLRQEEIILDITEMKKACN
Sbjct: 181 ATGKIYLRQEEIILDITEMKKACN 204


>gi|154800485 centromere protein N isoform 1 [Homo sapiens]
          Length = 353

 Score =  362 bits (929), Expect = e-100
 Identities = 179/184 (97%), Positives = 179/184 (97%)

Query: 1   MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKR 60
           MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKR
Sbjct: 1   MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKR 60

Query: 61  ASISDAALLDIIYMQFHQHQKVWDVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVT 120
           ASISDAALLDIIYMQFHQHQKVWDVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVT
Sbjct: 61  ASISDAALLDIIYMQFHQHQKVWDVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVT 120

Query: 121 VSFRETEENAVWIRIAWGTQYTKPNQYKPTYVVYYSQTPYAFTSSSMLRRNTPLLGQELE 180
           VSFRETEENAVWIRIAWGTQYTKPNQYKPTYVVYYSQTPYAFTSSSMLRRNTPLLGQ L 
Sbjct: 121 VSFRETEENAVWIRIAWGTQYTKPNQYKPTYVVYYSQTPYAFTSSSMLRRNTPLLGQALT 180

Query: 181 ATGK 184
              K
Sbjct: 181 IASK 184


>gi|154800483 centromere protein N isoform 2 [Homo sapiens]
          Length = 339

 Score =  362 bits (929), Expect = e-100
 Identities = 179/184 (97%), Positives = 179/184 (97%)

Query: 1   MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKR 60
           MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKR
Sbjct: 1   MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKR 60

Query: 61  ASISDAALLDIIYMQFHQHQKVWDVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVT 120
           ASISDAALLDIIYMQFHQHQKVWDVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVT
Sbjct: 61  ASISDAALLDIIYMQFHQHQKVWDVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVT 120

Query: 121 VSFRETEENAVWIRIAWGTQYTKPNQYKPTYVVYYSQTPYAFTSSSMLRRNTPLLGQELE 180
           VSFRETEENAVWIRIAWGTQYTKPNQYKPTYVVYYSQTPYAFTSSSMLRRNTPLLGQ L 
Sbjct: 121 VSFRETEENAVWIRIAWGTQYTKPNQYKPTYVVYYSQTPYAFTSSSMLRRNTPLLGQALT 180

Query: 181 ATGK 184
              K
Sbjct: 181 IASK 184


>gi|154350241 brefeldin A-inhibited guanine nucleotide-exchange
           protein 3 [Homo sapiens]
          Length = 2177

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/72 (23%), Positives = 37/72 (51%)

Query: 4   TVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKRASI 63
           T+++ +    L++   +  TI++  D   +   Q        + VV  L  LCE+ +A+I
Sbjct: 162 TLSQMLSDLTLQLRQRQENTIIENPDVPQDFGNQGSTVESLCDDVVSVLTVLCEKLQAAI 221

Query: 64  SDAALLDIIYMQ 75
           +D+  L ++Y++
Sbjct: 222 NDSQQLQLLYLE 233


>gi|205360947 microtubule associated monoxygenase, calponin and LIM
            domain containing 1 isoform 1 [Homo sapiens]
          Length = 1067

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/95 (21%), Positives = 45/95 (47%), Gaps = 5/95 (5%)

Query: 2    DETVAEFIKRTILKIPMNELTTILKAWDFLSEN-----QLQTVNFRQRKESVVQHLIHLC 56
            +E +  F K   ++  +NE+   L+  +          + Q+ +  Q+K+  V  L+ L 
Sbjct: 919  EEEMKRFCKAQTIQRRLNEIEAALRELEAEGVKLELALRRQSSSPEQQKKLWVGQLLQLV 978

Query: 57   EEKRASISDAALLDIIYMQFHQHQKVWDVFQMSKG 91
            ++K + +++ A L I   + +  +K W + Q  +G
Sbjct: 979  DKKNSLVAEEAELMITVQELNLEEKQWQLDQELRG 1013



 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 100 DMKQFKNSFKKILQRALKNVTVSFRETEENAVWIRIAWGTQYTKPNQYKPTYV 152
           +MK+F  +  + +QR L  +  + RE E   V + +A   Q + P Q K  +V
Sbjct: 921 EMKRFCKA--QTIQRRLNEIEAALRELEAEGVKLELALRRQSSSPEQQKKLWV 971


>gi|226530313 microtubule associated monoxygenase, calponin and LIM
           domain containing 1 isoform 2 [Homo sapiens]
          Length = 981

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/95 (21%), Positives = 45/95 (47%), Gaps = 5/95 (5%)

Query: 2   DETVAEFIKRTILKIPMNELTTILKAWDFLSEN-----QLQTVNFRQRKESVVQHLIHLC 56
           +E +  F K   ++  +NE+   L+  +          + Q+ +  Q+K+  V  L+ L 
Sbjct: 833 EEEMKRFCKAQTIQRRLNEIEAALRELEAEGVKLELALRRQSSSPEQQKKLWVGQLLQLV 892

Query: 57  EEKRASISDAALLDIIYMQFHQHQKVWDVFQMSKG 91
           ++K + +++ A L I   + +  +K W + Q  +G
Sbjct: 893 DKKNSLVAEEAELMITVQELNLEEKQWQLDQELRG 927



 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 100 DMKQFKNSFKKILQRALKNVTVSFRETEENAVWIRIAWGTQYTKPNQYKPTYV 152
           +MK+F  +  + +QR L  +  + RE E   V + +A   Q + P Q K  +V
Sbjct: 835 EMKRFCKA--QTIQRRLNEIEAALRELEAEGVKLELALRRQSSSPEQQKKLWV 885


>gi|239755296 PREDICTED: similar to hCG1644292 [Homo sapiens]
          Length = 671

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 77  HQHQKVWDVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVTVSFRETEENAVWIRIA 136
           H     ++ F +    G + D  ++  +  S   IL R   N      +T  N   +R+ 
Sbjct: 22  HYLTNSFEDFNLQNSSGCEKDFVEIWDYHTS-GNILGRYCANTIPDSTDTSSNTAVVRVW 80

Query: 137 WGTQYTKPNQYKPTY 151
           WG+Q +      P Y
Sbjct: 81  WGSQGSAGTSTSPNY 95


>gi|239749791 PREDICTED: similar to hCG1644292 [Homo sapiens]
          Length = 671

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 77  HQHQKVWDVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVTVSFRETEENAVWIRIA 136
           H     ++ F +    G + D  ++  +  S   IL R   N      +T  N   +R+ 
Sbjct: 22  HYLTNSFEDFNLQNSSGCEKDFVEIWDYHTS-GNILGRYCANTIPDSTDTSSNTAVVRVW 80

Query: 137 WGTQYTKPNQYKPTY 151
           WG+Q +      P Y
Sbjct: 81  WGSQGSAGTSTSPNY 95


>gi|34452732 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac
            exchange factor 1 [Homo sapiens]
          Length = 1659

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 7/70 (10%)

Query: 116  LKNVTVSFRETEEN-----AVWIRIAWGTQYTKPNQYKPTYVVYYSQTPYAFTSSSMLRR 170
            L NVT SF++ +EN      V+  I    Q  K   Y  +Y  ++S+ P      + LR 
Sbjct: 1406 LDNVTFSFKQLDENYVANTNVFYHIEGSRQALKVIFYLDSY--HFSKLPSRLEGGASLRL 1463

Query: 171  NTPLLGQELE 180
            +T L  + LE
Sbjct: 1464 HTALFTKVLE 1473


>gi|21396500 HIRA interacting protein 3 [Homo sapiens]
          Length = 556

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 2   DETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEK 59
           +E+ AE ++RT  K+  N+ T  LK  +  SE ++      QR+E V +      EEK
Sbjct: 197 EESEAEPVQRTAKKVEGNKGTKSLKESEQESEEEILAQKKEQREEEVEEEEKEEDEEK 254


>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
          Length = 1216

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 13/127 (10%)

Query: 40  NFRQRKESVVQHLIHLCEEKRASISDAA--LLDIIYMQFHQHQKVWDVFQMSK------- 90
           N R   E V   + H    K++S+  +A  + D I+   HQH+KV +  +M+K       
Sbjct: 107 NQRMLLEGVTTQVAH----KKSSLQTSAKQIEDRIFEVKHQHRKVENQIKMAKMVLMNEL 162

Query: 91  GPGEDVDLFDMKQFKNSFKKILQRALKNVTVSFRETEENAVWIRIAWGTQYTKPNQYKPT 150
               +  + +++   N  K+ L++ L+++ V  R+ E    +I  A  ++ + P  +   
Sbjct: 163 NKQANGLIEELEGITNERKRKLEQQLQSIMVLNRQFEHVQNFINWAVCSKTSVPFLFSKE 222

Query: 151 YVVYYSQ 157
            +V+  Q
Sbjct: 223 LIVFQMQ 229


>gi|40254871 transmembrane protease, serine 11E [Homo sapiens]
          Length = 423

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 14/84 (16%)

Query: 1   MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKR 60
           M + +   +K    K P+ E        +F+     Q + F Q+K  V+ H++ +C  + 
Sbjct: 79  MSQRLESMVKNAFYKSPLRE--------EFVKS---QVIKFSQQKHGVLAHMLLIC--RF 125

Query: 61  ASISDAALLDIIYMQFHQHQKVWD 84
            S  D   +D I +Q   H+K+ D
Sbjct: 126 HSTEDPETVDKI-VQLVLHEKLQD 148


>gi|153791781 transmembrane protease, serine 11E2 [Homo sapiens]
          Length = 423

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 14/84 (16%)

Query: 1   MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKR 60
           M + +   +K    K P+ E        +F+     Q + F Q+K  V+ H++ +C  + 
Sbjct: 79  MSQRLESMVKNAFYKSPLRE--------EFVKS---QVIKFSQQKHGVLAHMLLIC--RF 125

Query: 61  ASISDAALLDIIYMQFHQHQKVWD 84
            S  D   +D I +Q   H+K+ D
Sbjct: 126 HSTEDPETVDKI-VQLVLHEKLQD 148


>gi|194394141 nucleolar preribosomal-associated protein 1 [Homo
           sapiens]
          Length = 2271

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 3   ETVAEFIKRTILKIPMNELTTILKAWDFLSE-NQLQTVNFRQRKESVVQHLIHL 55
           ETV +F++R +L +  N  +   KA DF+ E + LQ    +Q  + +   + H+
Sbjct: 694 ETVIQFLERILLTLVANPYSYTDKASDFVQEASMLQATMTKQEADDMSIPISHI 747


>gi|194239713 laeverin [Homo sapiens]
          Length = 990

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 8/122 (6%)

Query: 16  IPMNELTTILKAWDFLSENQLQTVNFRQ----RKESVVQHLIH-LCEEKRASISDAALLD 70
           + MN    I     F S  + + +N+      R E    +++H +  E  A ++ A  + 
Sbjct: 426 VTMNWWNNIWLNEGFASYFEFEVINYFNPKLPRNEIFFSNILHNILREDHALVTRAVAMK 485

Query: 71  IIYMQFHQHQKVWDVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVTVSFRETEENA 130
           +   +  + Q+++D+F  SKG      +      ++ F   L+  LK  T S+   E++ 
Sbjct: 486 VENFKTSEIQELFDIFTYSKG-ASMARMLSCFLNEHLFVSALKSYLK--TFSYSNAEQDD 542

Query: 131 VW 132
           +W
Sbjct: 543 LW 544


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.133    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,865,037
Number of Sequences: 37866
Number of extensions: 261608
Number of successful extensions: 625
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 616
Number of HSP's gapped (non-prelim): 17
length of query: 204
length of database: 18,247,518
effective HSP length: 97
effective length of query: 107
effective length of database: 14,574,516
effective search space: 1559473212
effective search space used: 1559473212
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.