Guide to the Human Genome
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Search of human proteins with 88953166

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|88953166 PREDICTED: hypothetical protein [Homo sapiens]
         (90 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169163639 PREDICTED: hypothetical protein [Homo sapiens]           187   2e-48
gi|88954992 PREDICTED: hypothetical protein [Homo sapiens]            187   2e-48
gi|88953166 PREDICTED: hypothetical protein [Homo sapiens]            187   2e-48
gi|5031749 high-mobility group nucleosomal binding domain 2 [Hom...   162   5e-41
gi|169165461 PREDICTED: hypothetical protein [Homo sapiens]           157   2e-39
gi|169165899 PREDICTED: hypothetical protein [Homo sapiens]           157   2e-39
gi|169165087 PREDICTED: hypothetical protein [Homo sapiens]           157   2e-39
gi|169165669 PREDICTED: similar to high-mobility group nucleosom...   153   3e-38
gi|113415254 PREDICTED: similar to high-mobility group nucleosom...   153   3e-38
gi|113414676 PREDICTED: similar to high-mobility group nucleosom...   153   3e-38
gi|239755359 PREDICTED: similar to hCG2040565 [Homo sapiens]          149   4e-37
gi|239749851 PREDICTED: similar to hCG2040565 [Homo sapiens]          149   4e-37
gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo ...   149   4e-37
gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]          143   3e-35
gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]          143   3e-35
gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]          143   3e-35
gi|10835240 high mobility group nucleosomal binding domain 4 [Ho...   140   3e-34
gi|169209024 PREDICTED: similar to high-mobility group nucleosom...   137   2e-33
gi|113425750 PREDICTED: similar to high-mobility group nucleosom...   137   2e-33
gi|113425298 PREDICTED: similar to high-mobility group nucleosom...   137   2e-33
gi|169202834 PREDICTED: hypothetical protein [Homo sapiens]           136   4e-33
gi|89034591 PREDICTED: hypothetical protein [Homo sapiens]            136   4e-33
gi|89033815 PREDICTED: hypothetical protein [Homo sapiens]            136   4e-33
gi|239753184 PREDICTED: similar to hCG2040565 [Homo sapiens]          134   1e-32
gi|239747758 PREDICTED: hypothetical protein XP_002348261 [Homo ...   134   1e-32
gi|239741624 PREDICTED: hypothetical protein XP_002342251 [Homo ...   134   1e-32
gi|169208981 PREDICTED: hypothetical protein [Homo sapiens]           120   3e-28
gi|89039047 PREDICTED: hypothetical protein [Homo sapiens]            120   3e-28
gi|89038348 PREDICTED: hypothetical protein [Homo sapiens]            120   3e-28
gi|169168547 PREDICTED: similar to hCG2040192 [Homo sapiens]          108   7e-25

>gi|169163639 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score =  187 bits (474), Expect = 2e-48
 Identities = 90/90 (100%), Positives = 90/90 (100%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA
Sbjct: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
          YAGKEGNNLAENGDAKTDGAQKAESAGDAK
Sbjct: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90


>gi|88954992 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score =  187 bits (474), Expect = 2e-48
 Identities = 90/90 (100%), Positives = 90/90 (100%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA
Sbjct: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
          YAGKEGNNLAENGDAKTDGAQKAESAGDAK
Sbjct: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90


>gi|88953166 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score =  187 bits (474), Expect = 2e-48
 Identities = 90/90 (100%), Positives = 90/90 (100%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA
Sbjct: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
          YAGKEGNNLAENGDAKTDGAQKAESAGDAK
Sbjct: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90


>gi|5031749 high-mobility group nucleosomal binding domain 2 [Homo
          sapiens]
          Length = 90

 Score =  162 bits (410), Expect = 5e-41
 Identities = 80/90 (88%), Positives = 82/90 (91%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRK EGDAKGDKAKVK+EPQRR  RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 1  MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           AGKEGNN AENGDAKTD AQKAE AGDAK
Sbjct: 61 DAGKEGNNPAENGDAKTDQAQKAEGAGDAK 90


>gi|169165461 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score =  157 bits (396), Expect = 2e-39
 Identities = 76/90 (84%), Positives = 81/90 (90%)

Query: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
           +PKRK EGDAKGDKAKVK+EPQRR MR SAKPAPP PEPKP+KAPAKKGEK+PKGKKGKA
Sbjct: 51  VPKRKAEGDAKGDKAKVKDEPQRRSMRFSAKPAPPKPEPKPKKAPAKKGEKIPKGKKGKA 110

Query: 61  YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
            AG+EGNN AENGDAKTD AQKAE AG AK
Sbjct: 111 DAGEEGNNPAENGDAKTDQAQKAEGAGGAK 140


>gi|169165899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score =  157 bits (396), Expect = 2e-39
 Identities = 76/90 (84%), Positives = 81/90 (90%)

Query: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
           +PKRK EGDAKGDKAKVK+EPQRR MR SAKPAPP PEPKP+KAPAKKGEK+PKGKKGKA
Sbjct: 51  VPKRKAEGDAKGDKAKVKDEPQRRSMRFSAKPAPPKPEPKPKKAPAKKGEKIPKGKKGKA 110

Query: 61  YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
            AG+EGNN AENGDAKTD AQKAE AG AK
Sbjct: 111 DAGEEGNNPAENGDAKTDQAQKAEGAGGAK 140


>gi|169165087 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score =  157 bits (396), Expect = 2e-39
 Identities = 76/90 (84%), Positives = 81/90 (90%)

Query: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
           +PKRK EGDAKGDKAKVK+EPQRR MR SAKPAPP PEPKP+KAPAKKGEK+PKGKKGKA
Sbjct: 51  VPKRKAEGDAKGDKAKVKDEPQRRSMRFSAKPAPPKPEPKPKKAPAKKGEKIPKGKKGKA 110

Query: 61  YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
            AG+EGNN AENGDAKTD AQKAE AG AK
Sbjct: 111 DAGEEGNNPAENGDAKTDQAQKAEGAGGAK 140


>gi|169165669 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score =  153 bits (386), Expect = 3e-38
 Identities = 76/90 (84%), Positives = 80/90 (88%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRK EGD K DKAKVK+EPQRR +RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 1  MPKRKAEGDTKRDKAKVKDEPQRRSVRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           AG+EGNN AENG AKTD AQKAES GDAK
Sbjct: 61 DAGEEGNNPAENGVAKTDQAQKAESPGDAK 90


>gi|113415254 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score =  153 bits (386), Expect = 3e-38
 Identities = 76/90 (84%), Positives = 80/90 (88%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRK EGD K DKAKVK+EPQRR +RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 1  MPKRKAEGDTKRDKAKVKDEPQRRSVRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           AG+EGNN AENG AKTD AQKAES GDAK
Sbjct: 61 DAGEEGNNPAENGVAKTDQAQKAESPGDAK 90


>gi|113414676 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score =  153 bits (386), Expect = 3e-38
 Identities = 76/90 (84%), Positives = 80/90 (88%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRK EGD K DKAKVK+EPQRR +RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 1  MPKRKAEGDTKRDKAKVKDEPQRRSVRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           AG+EGNN AENG AKTD AQKAES GDAK
Sbjct: 61 DAGEEGNNPAENGVAKTDQAQKAESPGDAK 90


>gi|239755359 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 130

 Score =  149 bits (377), Expect = 4e-37
 Identities = 75/92 (81%), Positives = 80/92 (86%), Gaps = 2/92 (2%)

Query: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKG-- 58
           +PKRK EGDAKGDKAKVK++PQRR MRLSAKPAPP PEPKP+ APAKKGEKVPKGKKG  
Sbjct: 39  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 98

Query: 59  KAYAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           +A AGKEGNN AENGDAK D AQKAE  GDAK
Sbjct: 99  RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 130


>gi|239749851 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 171

 Score =  149 bits (377), Expect = 4e-37
 Identities = 75/92 (81%), Positives = 80/92 (86%), Gaps = 2/92 (2%)

Query: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKG-- 58
           +PKRK EGDAKGDKAKVK++PQRR MRLSAKPAPP PEPKP+ APAKKGEKVPKGKKG  
Sbjct: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139

Query: 59  KAYAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           +A AGKEGNN AENGDAK D AQKAE  GDAK
Sbjct: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171


>gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo
           sapiens]
          Length = 171

 Score =  149 bits (377), Expect = 4e-37
 Identities = 75/92 (81%), Positives = 80/92 (86%), Gaps = 2/92 (2%)

Query: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKG-- 58
           +PKRK EGDAKGDKAKVK++PQRR MRLSAKPAPP PEPKP+ APAKKGEKVPKGKKG  
Sbjct: 80  VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139

Query: 59  KAYAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           +A AGKEGNN AENGDAK D AQKAE  GDAK
Sbjct: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171


>gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 193

 Score =  143 bits (361), Expect = 3e-35
 Identities = 72/90 (80%), Positives = 76/90 (84%)

Query: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
           MPK K EGD KGDKAKVK+EPQRR  RLSAKP+ P PEPKP+KAPAKKGEKV K KKGKA
Sbjct: 36  MPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAKKGEKVLKEKKGKA 95

Query: 61  YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
            AGKEGNN AENGDAKTD  QKAE AGDA+
Sbjct: 96  DAGKEGNNPAENGDAKTDQEQKAEGAGDAR 125


>gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 176

 Score =  143 bits (361), Expect = 3e-35
 Identities = 72/90 (80%), Positives = 76/90 (84%)

Query: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
           MPK K EGD KGDKAKVK+EPQRR  RLSAKP+ P PEPKP+KAPAKKGEKV K KKGKA
Sbjct: 19  MPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAKKGEKVLKEKKGKA 78

Query: 61  YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
            AGKEGNN AENGDAKTD  QKAE AGDA+
Sbjct: 79  DAGKEGNNPAENGDAKTDQEQKAEGAGDAR 108


>gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 176

 Score =  143 bits (361), Expect = 3e-35
 Identities = 72/90 (80%), Positives = 76/90 (84%)

Query: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
           MPK K EGD KGDKAKVK+EPQRR  RLSAKP+ P PEPKP+KAPAKKGEKV K KKGKA
Sbjct: 19  MPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAKKGEKVLKEKKGKA 78

Query: 61  YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
            AGKEGNN AENGDAKTD  QKAE AGDA+
Sbjct: 79  DAGKEGNNPAENGDAKTDQEQKAEGAGDAR 108


>gi|10835240 high mobility group nucleosomal binding domain 4
          [Homo sapiens]
          Length = 90

 Score =  140 bits (352), Expect = 3e-34
 Identities = 68/90 (75%), Positives = 77/90 (85%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRK +GDAKGDKAKVK+EPQRR  RLSAKPAPP PEP+P+KA AKKGEK+PKG+KGKA
Sbjct: 1  MPKRKAKGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPRPKKASAKKGEKLPKGRKGKA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           AGK+GNN A+N DA T  +QKAE  GDAK
Sbjct: 61 DAGKDGNNPAKNRDASTLQSQKAEGTGDAK 90


>gi|169209024 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score =  137 bits (344), Expect = 2e-33
 Identities = 67/90 (74%), Positives = 72/90 (80%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRK EGDAKGDKAKV+++PQRR  RLS KPAPP PE KP+K PAK GEKV KG+ GKA
Sbjct: 1  MPKRKAEGDAKGDKAKVRDKPQRRSARLSTKPAPPKPETKPKKVPAKNGEKVLKGEMGKA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
            GKEGN  AENGDAKTD  QK E AGDAK
Sbjct: 61 DTGKEGNKPAENGDAKTDQTQKGEGAGDAK 90


>gi|113425750 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score =  137 bits (344), Expect = 2e-33
 Identities = 67/90 (74%), Positives = 72/90 (80%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRK EGDAKGDKAKV+++PQRR  RLS KPAPP PE KP+K PAK GEKV KG+ GKA
Sbjct: 1  MPKRKAEGDAKGDKAKVRDKPQRRSARLSTKPAPPKPETKPKKVPAKNGEKVLKGEMGKA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
            GKEGN  AENGDAKTD  QK E AGDAK
Sbjct: 61 DTGKEGNKPAENGDAKTDQTQKGEGAGDAK 90


>gi|113425298 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score =  137 bits (344), Expect = 2e-33
 Identities = 67/90 (74%), Positives = 72/90 (80%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRK EGDAKGDKAKV+++PQRR  RLS KPAPP PE KP+K PAK GEKV KG+ GKA
Sbjct: 1  MPKRKAEGDAKGDKAKVRDKPQRRSARLSTKPAPPKPETKPKKVPAKNGEKVLKGEMGKA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
            GKEGN  AENGDAKTD  QK E AGDAK
Sbjct: 61 DTGKEGNKPAENGDAKTDQTQKGEGAGDAK 90


>gi|169202834 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score =  136 bits (342), Expect = 4e-33
 Identities = 67/89 (75%), Positives = 75/89 (84%)

Query: 2   PKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKAY 61
           P+RK +GDAKG KAKVK++PQRR +RL+AKPAPP P  KP+K PAK GEKV KGKKGKA 
Sbjct: 15  PRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKNGEKVLKGKKGKAD 74

Query: 62  AGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           AGKEGNN AENG+ KTD AQKAE AGDAK
Sbjct: 75  AGKEGNNPAENGETKTDHAQKAEGAGDAK 103


>gi|89034591 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score =  136 bits (342), Expect = 4e-33
 Identities = 67/89 (75%), Positives = 75/89 (84%)

Query: 2   PKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKAY 61
           P+RK +GDAKG KAKVK++PQRR +RL+AKPAPP P  KP+K PAK GEKV KGKKGKA 
Sbjct: 15  PRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKNGEKVLKGKKGKAD 74

Query: 62  AGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           AGKEGNN AENG+ KTD AQKAE AGDAK
Sbjct: 75  AGKEGNNPAENGETKTDHAQKAEGAGDAK 103


>gi|89033815 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score =  136 bits (342), Expect = 4e-33
 Identities = 67/89 (75%), Positives = 75/89 (84%)

Query: 2   PKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKAY 61
           P+RK +GDAKG KAKVK++PQRR +RL+AKPAPP P  KP+K PAK GEKV KGKKGKA 
Sbjct: 15  PRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKNGEKVLKGKKGKAD 74

Query: 62  AGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           AGKEGNN AENG+ KTD AQKAE AGDAK
Sbjct: 75  AGKEGNNPAENGETKTDHAQKAEGAGDAK 103


>gi|239753184 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 197

 Score =  134 bits (338), Expect = 1e-32
 Identities = 69/90 (76%), Positives = 75/90 (83%), Gaps = 1/90 (1%)

Query: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
           +PKRK EGD KGDKAKV + PQRR  RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 109 LPKRKTEGDVKGDKAKV-DTPQRRSTRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 167

Query: 61  YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
            AGKEGN  AE GDA TD A++AE  G+AK
Sbjct: 168 DAGKEGNYPAEKGDAITDQAREAEGDGEAK 197


>gi|239747758 PREDICTED: hypothetical protein XP_002348261 [Homo
           sapiens]
          Length = 197

 Score =  134 bits (338), Expect = 1e-32
 Identities = 69/90 (76%), Positives = 75/90 (83%), Gaps = 1/90 (1%)

Query: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
           +PKRK EGD KGDKAKV + PQRR  RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 109 LPKRKTEGDVKGDKAKV-DTPQRRSTRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 167

Query: 61  YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
            AGKEGN  AE GDA TD A++AE  G+AK
Sbjct: 168 DAGKEGNYPAEKGDAITDQAREAEGDGEAK 197


>gi|239741624 PREDICTED: hypothetical protein XP_002342251 [Homo
           sapiens]
          Length = 197

 Score =  134 bits (338), Expect = 1e-32
 Identities = 69/90 (76%), Positives = 75/90 (83%), Gaps = 1/90 (1%)

Query: 1   MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
           +PKRK EGD KGDKAKV + PQRR  RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 109 LPKRKTEGDVKGDKAKV-DTPQRRSTRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 167

Query: 61  YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
            AGKEGN  AE GDA TD A++AE  G+AK
Sbjct: 168 DAGKEGNYPAEKGDAITDQAREAEGDGEAK 197


>gi|169208981 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score =  120 bits (300), Expect = 3e-28
 Identities = 60/90 (66%), Positives = 71/90 (78%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRK EGDAK DKAK+K++ Q R  +LS KPA P P+ KP+KAP KKGEKV KG+KG+A
Sbjct: 1  MPKRKAEGDAKEDKAKIKDKLQGRSTKLSGKPALPKPQLKPKKAPTKKGEKVSKGEKGRA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           + KE N  AENGDA+T+ AQKAE AGDAK
Sbjct: 61 NSDKEVNKPAENGDARTEKAQKAEGAGDAK 90


>gi|89039047 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score =  120 bits (300), Expect = 3e-28
 Identities = 60/90 (66%), Positives = 71/90 (78%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRK EGDAK DKAK+K++ Q R  +LS KPA P P+ KP+KAP KKGEKV KG+KG+A
Sbjct: 1  MPKRKAEGDAKEDKAKIKDKLQGRSTKLSGKPALPKPQLKPKKAPTKKGEKVSKGEKGRA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           + KE N  AENGDA+T+ AQKAE AGDAK
Sbjct: 61 NSDKEVNKPAENGDARTEKAQKAEGAGDAK 90


>gi|89038348 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 90

 Score =  120 bits (300), Expect = 3e-28
 Identities = 60/90 (66%), Positives = 71/90 (78%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPKRK EGDAK DKAK+K++ Q R  +LS KPA P P+ KP+KAP KKGEKV KG+KG+A
Sbjct: 1  MPKRKAEGDAKEDKAKIKDKLQGRSTKLSGKPALPKPQLKPKKAPTKKGEKVSKGEKGRA 60

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           + KE N  AENGDA+T+ AQKAE AGDAK
Sbjct: 61 NSDKEVNKPAENGDARTEKAQKAEGAGDAK 90


>gi|169168547 PREDICTED: similar to hCG2040192 [Homo sapiens]
          Length = 88

 Score =  108 bits (271), Expect = 7e-25
 Identities = 59/90 (65%), Positives = 66/90 (73%), Gaps = 2/90 (2%)

Query: 1  MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
          MPK K EGDAKGDKAKVK+EP RR  RLS KP+    + K  K   ++G +  + KKGKA
Sbjct: 1  MPKTKIEGDAKGDKAKVKDEPLRRSARLSTKPSKARAQAK--KGSREEGREGTQWKKGKA 58

Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
           AGKEGNN AENGDAKTD AQKAE AGDAK
Sbjct: 59 VAGKEGNNPAENGDAKTDQAQKAEGAGDAK 88


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.299    0.124    0.346 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,722,798
Number of Sequences: 37866
Number of extensions: 282533
Number of successful extensions: 3558
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 347
Number of HSP's that attempted gapping in prelim test: 2195
Number of HSP's gapped (non-prelim): 1513
length of query: 90
length of database: 18,247,518
effective HSP length: 62
effective length of query: 28
effective length of database: 15,899,826
effective search space: 445195128
effective search space used: 445195128
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (22.0 bits)
S2: 54 (25.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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