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Search of human proteins with 88953166
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|88953166 PREDICTED: hypothetical protein [Homo sapiens]
(90 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169163639 PREDICTED: hypothetical protein [Homo sapiens] 187 2e-48
gi|88954992 PREDICTED: hypothetical protein [Homo sapiens] 187 2e-48
gi|88953166 PREDICTED: hypothetical protein [Homo sapiens] 187 2e-48
gi|5031749 high-mobility group nucleosomal binding domain 2 [Hom... 162 5e-41
gi|169165461 PREDICTED: hypothetical protein [Homo sapiens] 157 2e-39
gi|169165899 PREDICTED: hypothetical protein [Homo sapiens] 157 2e-39
gi|169165087 PREDICTED: hypothetical protein [Homo sapiens] 157 2e-39
gi|169165669 PREDICTED: similar to high-mobility group nucleosom... 153 3e-38
gi|113415254 PREDICTED: similar to high-mobility group nucleosom... 153 3e-38
gi|113414676 PREDICTED: similar to high-mobility group nucleosom... 153 3e-38
gi|239755359 PREDICTED: similar to hCG2040565 [Homo sapiens] 149 4e-37
gi|239749851 PREDICTED: similar to hCG2040565 [Homo sapiens] 149 4e-37
gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo ... 149 4e-37
gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens] 143 3e-35
gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens] 143 3e-35
gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens] 143 3e-35
gi|10835240 high mobility group nucleosomal binding domain 4 [Ho... 140 3e-34
gi|169209024 PREDICTED: similar to high-mobility group nucleosom... 137 2e-33
gi|113425750 PREDICTED: similar to high-mobility group nucleosom... 137 2e-33
gi|113425298 PREDICTED: similar to high-mobility group nucleosom... 137 2e-33
gi|169202834 PREDICTED: hypothetical protein [Homo sapiens] 136 4e-33
gi|89034591 PREDICTED: hypothetical protein [Homo sapiens] 136 4e-33
gi|89033815 PREDICTED: hypothetical protein [Homo sapiens] 136 4e-33
gi|239753184 PREDICTED: similar to hCG2040565 [Homo sapiens] 134 1e-32
gi|239747758 PREDICTED: hypothetical protein XP_002348261 [Homo ... 134 1e-32
gi|239741624 PREDICTED: hypothetical protein XP_002342251 [Homo ... 134 1e-32
gi|169208981 PREDICTED: hypothetical protein [Homo sapiens] 120 3e-28
gi|89039047 PREDICTED: hypothetical protein [Homo sapiens] 120 3e-28
gi|89038348 PREDICTED: hypothetical protein [Homo sapiens] 120 3e-28
gi|169168547 PREDICTED: similar to hCG2040192 [Homo sapiens] 108 7e-25
>gi|169163639 PREDICTED: hypothetical protein [Homo sapiens]
Length = 90
Score = 187 bits (474), Expect = 2e-48
Identities = 90/90 (100%), Positives = 90/90 (100%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA
Sbjct: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
YAGKEGNNLAENGDAKTDGAQKAESAGDAK
Sbjct: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
>gi|88954992 PREDICTED: hypothetical protein [Homo sapiens]
Length = 90
Score = 187 bits (474), Expect = 2e-48
Identities = 90/90 (100%), Positives = 90/90 (100%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA
Sbjct: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
YAGKEGNNLAENGDAKTDGAQKAESAGDAK
Sbjct: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
>gi|88953166 PREDICTED: hypothetical protein [Homo sapiens]
Length = 90
Score = 187 bits (474), Expect = 2e-48
Identities = 90/90 (100%), Positives = 90/90 (100%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA
Sbjct: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
YAGKEGNNLAENGDAKTDGAQKAESAGDAK
Sbjct: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
>gi|5031749 high-mobility group nucleosomal binding domain 2 [Homo
sapiens]
Length = 90
Score = 162 bits (410), Expect = 5e-41
Identities = 80/90 (88%), Positives = 82/90 (91%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRK EGDAKGDKAKVK+EPQRR RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 1 MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AGKEGNN AENGDAKTD AQKAE AGDAK
Sbjct: 61 DAGKEGNNPAENGDAKTDQAQKAEGAGDAK 90
>gi|169165461 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 157 bits (396), Expect = 2e-39
Identities = 76/90 (84%), Positives = 81/90 (90%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
+PKRK EGDAKGDKAKVK+EPQRR MR SAKPAPP PEPKP+KAPAKKGEK+PKGKKGKA
Sbjct: 51 VPKRKAEGDAKGDKAKVKDEPQRRSMRFSAKPAPPKPEPKPKKAPAKKGEKIPKGKKGKA 110
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AG+EGNN AENGDAKTD AQKAE AG AK
Sbjct: 111 DAGEEGNNPAENGDAKTDQAQKAEGAGGAK 140
>gi|169165899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 157 bits (396), Expect = 2e-39
Identities = 76/90 (84%), Positives = 81/90 (90%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
+PKRK EGDAKGDKAKVK+EPQRR MR SAKPAPP PEPKP+KAPAKKGEK+PKGKKGKA
Sbjct: 51 VPKRKAEGDAKGDKAKVKDEPQRRSMRFSAKPAPPKPEPKPKKAPAKKGEKIPKGKKGKA 110
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AG+EGNN AENGDAKTD AQKAE AG AK
Sbjct: 111 DAGEEGNNPAENGDAKTDQAQKAEGAGGAK 140
>gi|169165087 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 157 bits (396), Expect = 2e-39
Identities = 76/90 (84%), Positives = 81/90 (90%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
+PKRK EGDAKGDKAKVK+EPQRR MR SAKPAPP PEPKP+KAPAKKGEK+PKGKKGKA
Sbjct: 51 VPKRKAEGDAKGDKAKVKDEPQRRSMRFSAKPAPPKPEPKPKKAPAKKGEKIPKGKKGKA 110
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AG+EGNN AENGDAKTD AQKAE AG AK
Sbjct: 111 DAGEEGNNPAENGDAKTDQAQKAEGAGGAK 140
>gi|169165669 PREDICTED: similar to high-mobility group
nucleosomal binding domain 2 [Homo sapiens]
Length = 90
Score = 153 bits (386), Expect = 3e-38
Identities = 76/90 (84%), Positives = 80/90 (88%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRK EGD K DKAKVK+EPQRR +RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 1 MPKRKAEGDTKRDKAKVKDEPQRRSVRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AG+EGNN AENG AKTD AQKAES GDAK
Sbjct: 61 DAGEEGNNPAENGVAKTDQAQKAESPGDAK 90
>gi|113415254 PREDICTED: similar to high-mobility group
nucleosomal binding domain 2 [Homo sapiens]
Length = 90
Score = 153 bits (386), Expect = 3e-38
Identities = 76/90 (84%), Positives = 80/90 (88%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRK EGD K DKAKVK+EPQRR +RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 1 MPKRKAEGDTKRDKAKVKDEPQRRSVRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AG+EGNN AENG AKTD AQKAES GDAK
Sbjct: 61 DAGEEGNNPAENGVAKTDQAQKAESPGDAK 90
>gi|113414676 PREDICTED: similar to high-mobility group
nucleosomal binding domain 2 [Homo sapiens]
Length = 90
Score = 153 bits (386), Expect = 3e-38
Identities = 76/90 (84%), Positives = 80/90 (88%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRK EGD K DKAKVK+EPQRR +RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 1 MPKRKAEGDTKRDKAKVKDEPQRRSVRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AG+EGNN AENG AKTD AQKAES GDAK
Sbjct: 61 DAGEEGNNPAENGVAKTDQAQKAESPGDAK 90
>gi|239755359 PREDICTED: similar to hCG2040565 [Homo sapiens]
Length = 130
Score = 149 bits (377), Expect = 4e-37
Identities = 75/92 (81%), Positives = 80/92 (86%), Gaps = 2/92 (2%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKG-- 58
+PKRK EGDAKGDKAKVK++PQRR MRLSAKPAPP PEPKP+ APAKKGEKVPKGKKG
Sbjct: 39 VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 98
Query: 59 KAYAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
+A AGKEGNN AENGDAK D AQKAE GDAK
Sbjct: 99 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 130
>gi|239749851 PREDICTED: similar to hCG2040565 [Homo sapiens]
Length = 171
Score = 149 bits (377), Expect = 4e-37
Identities = 75/92 (81%), Positives = 80/92 (86%), Gaps = 2/92 (2%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKG-- 58
+PKRK EGDAKGDKAKVK++PQRR MRLSAKPAPP PEPKP+ APAKKGEKVPKGKKG
Sbjct: 80 VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
Query: 59 KAYAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
+A AGKEGNN AENGDAK D AQKAE GDAK
Sbjct: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
>gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo
sapiens]
Length = 171
Score = 149 bits (377), Expect = 4e-37
Identities = 75/92 (81%), Positives = 80/92 (86%), Gaps = 2/92 (2%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKG-- 58
+PKRK EGDAKGDKAKVK++PQRR MRLSAKPAPP PEPKP+ APAKKGEKVPKGKKG
Sbjct: 80 VPKRKAEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAKKGEKVPKGKKGAR 139
Query: 59 KAYAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
+A AGKEGNN AENGDAK D AQKAE GDAK
Sbjct: 140 RADAGKEGNNPAENGDAKRDEAQKAEGTGDAK 171
>gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]
Length = 193
Score = 143 bits (361), Expect = 3e-35
Identities = 72/90 (80%), Positives = 76/90 (84%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPK K EGD KGDKAKVK+EPQRR RLSAKP+ P PEPKP+KAPAKKGEKV K KKGKA
Sbjct: 36 MPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAKKGEKVLKEKKGKA 95
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AGKEGNN AENGDAKTD QKAE AGDA+
Sbjct: 96 DAGKEGNNPAENGDAKTDQEQKAEGAGDAR 125
>gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]
Length = 176
Score = 143 bits (361), Expect = 3e-35
Identities = 72/90 (80%), Positives = 76/90 (84%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPK K EGD KGDKAKVK+EPQRR RLSAKP+ P PEPKP+KAPAKKGEKV K KKGKA
Sbjct: 19 MPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAKKGEKVLKEKKGKA 78
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AGKEGNN AENGDAKTD QKAE AGDA+
Sbjct: 79 DAGKEGNNPAENGDAKTDQEQKAEGAGDAR 108
>gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]
Length = 176
Score = 143 bits (361), Expect = 3e-35
Identities = 72/90 (80%), Positives = 76/90 (84%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPK K EGD KGDKAKVK+EPQRR RLSAKP+ P PEPKP+KAPAKKGEKV K KKGKA
Sbjct: 19 MPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAKKGEKVLKEKKGKA 78
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AGKEGNN AENGDAKTD QKAE AGDA+
Sbjct: 79 DAGKEGNNPAENGDAKTDQEQKAEGAGDAR 108
>gi|10835240 high mobility group nucleosomal binding domain 4
[Homo sapiens]
Length = 90
Score = 140 bits (352), Expect = 3e-34
Identities = 68/90 (75%), Positives = 77/90 (85%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRK +GDAKGDKAKVK+EPQRR RLSAKPAPP PEP+P+KA AKKGEK+PKG+KGKA
Sbjct: 1 MPKRKAKGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPRPKKASAKKGEKLPKGRKGKA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AGK+GNN A+N DA T +QKAE GDAK
Sbjct: 61 DAGKDGNNPAKNRDASTLQSQKAEGTGDAK 90
>gi|169209024 PREDICTED: similar to high-mobility group
nucleosomal binding domain 2 [Homo sapiens]
Length = 90
Score = 137 bits (344), Expect = 2e-33
Identities = 67/90 (74%), Positives = 72/90 (80%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRK EGDAKGDKAKV+++PQRR RLS KPAPP PE KP+K PAK GEKV KG+ GKA
Sbjct: 1 MPKRKAEGDAKGDKAKVRDKPQRRSARLSTKPAPPKPETKPKKVPAKNGEKVLKGEMGKA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
GKEGN AENGDAKTD QK E AGDAK
Sbjct: 61 DTGKEGNKPAENGDAKTDQTQKGEGAGDAK 90
>gi|113425750 PREDICTED: similar to high-mobility group
nucleosomal binding domain 2 [Homo sapiens]
Length = 90
Score = 137 bits (344), Expect = 2e-33
Identities = 67/90 (74%), Positives = 72/90 (80%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRK EGDAKGDKAKV+++PQRR RLS KPAPP PE KP+K PAK GEKV KG+ GKA
Sbjct: 1 MPKRKAEGDAKGDKAKVRDKPQRRSARLSTKPAPPKPETKPKKVPAKNGEKVLKGEMGKA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
GKEGN AENGDAKTD QK E AGDAK
Sbjct: 61 DTGKEGNKPAENGDAKTDQTQKGEGAGDAK 90
>gi|113425298 PREDICTED: similar to high-mobility group
nucleosomal binding domain 2 [Homo sapiens]
Length = 90
Score = 137 bits (344), Expect = 2e-33
Identities = 67/90 (74%), Positives = 72/90 (80%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRK EGDAKGDKAKV+++PQRR RLS KPAPP PE KP+K PAK GEKV KG+ GKA
Sbjct: 1 MPKRKAEGDAKGDKAKVRDKPQRRSARLSTKPAPPKPETKPKKVPAKNGEKVLKGEMGKA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
GKEGN AENGDAKTD QK E AGDAK
Sbjct: 61 DTGKEGNKPAENGDAKTDQTQKGEGAGDAK 90
>gi|169202834 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 136 bits (342), Expect = 4e-33
Identities = 67/89 (75%), Positives = 75/89 (84%)
Query: 2 PKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKAY 61
P+RK +GDAKG KAKVK++PQRR +RL+AKPAPP P KP+K PAK GEKV KGKKGKA
Sbjct: 15 PRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKNGEKVLKGKKGKAD 74
Query: 62 AGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AGKEGNN AENG+ KTD AQKAE AGDAK
Sbjct: 75 AGKEGNNPAENGETKTDHAQKAEGAGDAK 103
>gi|89034591 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 136 bits (342), Expect = 4e-33
Identities = 67/89 (75%), Positives = 75/89 (84%)
Query: 2 PKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKAY 61
P+RK +GDAKG KAKVK++PQRR +RL+AKPAPP P KP+K PAK GEKV KGKKGKA
Sbjct: 15 PRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKNGEKVLKGKKGKAD 74
Query: 62 AGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AGKEGNN AENG+ KTD AQKAE AGDAK
Sbjct: 75 AGKEGNNPAENGETKTDHAQKAEGAGDAK 103
>gi|89033815 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 136 bits (342), Expect = 4e-33
Identities = 67/89 (75%), Positives = 75/89 (84%)
Query: 2 PKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKAY 61
P+RK +GDAKG KAKVK++PQRR +RL+AKPAPP P KP+K PAK GEKV KGKKGKA
Sbjct: 15 PRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKNGEKVLKGKKGKAD 74
Query: 62 AGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AGKEGNN AENG+ KTD AQKAE AGDAK
Sbjct: 75 AGKEGNNPAENGETKTDHAQKAEGAGDAK 103
>gi|239753184 PREDICTED: similar to hCG2040565 [Homo sapiens]
Length = 197
Score = 134 bits (338), Expect = 1e-32
Identities = 69/90 (76%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
+PKRK EGD KGDKAKV + PQRR RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 109 LPKRKTEGDVKGDKAKV-DTPQRRSTRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 167
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AGKEGN AE GDA TD A++AE G+AK
Sbjct: 168 DAGKEGNYPAEKGDAITDQAREAEGDGEAK 197
>gi|239747758 PREDICTED: hypothetical protein XP_002348261 [Homo
sapiens]
Length = 197
Score = 134 bits (338), Expect = 1e-32
Identities = 69/90 (76%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
+PKRK EGD KGDKAKV + PQRR RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 109 LPKRKTEGDVKGDKAKV-DTPQRRSTRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 167
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AGKEGN AE GDA TD A++AE G+AK
Sbjct: 168 DAGKEGNYPAEKGDAITDQAREAEGDGEAK 197
>gi|239741624 PREDICTED: hypothetical protein XP_002342251 [Homo
sapiens]
Length = 197
Score = 134 bits (338), Expect = 1e-32
Identities = 69/90 (76%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
+PKRK EGD KGDKAKV + PQRR RLSAKPAPP PEPKP+KAPAKKGEKVPKGKKGKA
Sbjct: 109 LPKRKTEGDVKGDKAKV-DTPQRRSTRLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKA 167
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AGKEGN AE GDA TD A++AE G+AK
Sbjct: 168 DAGKEGNYPAEKGDAITDQAREAEGDGEAK 197
>gi|169208981 PREDICTED: hypothetical protein [Homo sapiens]
Length = 90
Score = 120 bits (300), Expect = 3e-28
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRK EGDAK DKAK+K++ Q R +LS KPA P P+ KP+KAP KKGEKV KG+KG+A
Sbjct: 1 MPKRKAEGDAKEDKAKIKDKLQGRSTKLSGKPALPKPQLKPKKAPTKKGEKVSKGEKGRA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
+ KE N AENGDA+T+ AQKAE AGDAK
Sbjct: 61 NSDKEVNKPAENGDARTEKAQKAEGAGDAK 90
>gi|89039047 PREDICTED: hypothetical protein [Homo sapiens]
Length = 90
Score = 120 bits (300), Expect = 3e-28
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRK EGDAK DKAK+K++ Q R +LS KPA P P+ KP+KAP KKGEKV KG+KG+A
Sbjct: 1 MPKRKAEGDAKEDKAKIKDKLQGRSTKLSGKPALPKPQLKPKKAPTKKGEKVSKGEKGRA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
+ KE N AENGDA+T+ AQKAE AGDAK
Sbjct: 61 NSDKEVNKPAENGDARTEKAQKAEGAGDAK 90
>gi|89038348 PREDICTED: hypothetical protein [Homo sapiens]
Length = 90
Score = 120 bits (300), Expect = 3e-28
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPKRK EGDAK DKAK+K++ Q R +LS KPA P P+ KP+KAP KKGEKV KG+KG+A
Sbjct: 1 MPKRKAEGDAKEDKAKIKDKLQGRSTKLSGKPALPKPQLKPKKAPTKKGEKVSKGEKGRA 60
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
+ KE N AENGDA+T+ AQKAE AGDAK
Sbjct: 61 NSDKEVNKPAENGDARTEKAQKAEGAGDAK 90
>gi|169168547 PREDICTED: similar to hCG2040192 [Homo sapiens]
Length = 88
Score = 108 bits (271), Expect = 7e-25
Identities = 59/90 (65%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
Query: 1 MPKRKGEGDAKGDKAKVKNEPQRRPMRLSAKPAPPTPEPKPEKAPAKKGEKVPKGKKGKA 60
MPK K EGDAKGDKAKVK+EP RR RLS KP+ + K K ++G + + KKGKA
Sbjct: 1 MPKTKIEGDAKGDKAKVKDEPLRRSARLSTKPSKARAQAK--KGSREEGREGTQWKKGKA 58
Query: 61 YAGKEGNNLAENGDAKTDGAQKAESAGDAK 90
AGKEGNN AENGDAKTD AQKAE AGDAK
Sbjct: 59 VAGKEGNNPAENGDAKTDQAQKAEGAGDAK 88
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.299 0.124 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,722,798
Number of Sequences: 37866
Number of extensions: 282533
Number of successful extensions: 3558
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 347
Number of HSP's that attempted gapping in prelim test: 2195
Number of HSP's gapped (non-prelim): 1513
length of query: 90
length of database: 18,247,518
effective HSP length: 62
effective length of query: 28
effective length of database: 15,899,826
effective search space: 445195128
effective search space used: 445195128
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (22.0 bits)
S2: 54 (25.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.