Search of human proteins with 8051636

Search of human proteins with 8051636

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8051636 tRNA exportin [Homo sapiens]
         (962 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8051636 tRNA exportin [Homo sapiens]                              1896   0.0  
gi|22748937 exportin 5 [Homo sapiens]                                  69   3e-11
gi|224831257 importin 13 [Homo sapiens]                                37   0.12 
gi|6912734 transportin 3 [Homo sapiens]                                37   0.12 
gi|17978477 vacuolar protein sorting 11 [Homo sapiens]                 36   0.15 
gi|197333695 poly(A)-specific ribonuclease (deadenylation nuclea...    33   1.3  
gi|4505611 poly(A)-specific ribonuclease (deadenylation nuclease...    33   1.3  
gi|82546830 SEC8 protein isoform a [Homo sapiens]                      32   2.2  
gi|118498354 component of oligomeric golgi complex 4 [Homo sapiens]    32   2.9  
gi|21361794 TIP120 protein [Homo sapiens]                              32   3.7  
gi|126032338 ryanodine receptor 3 [Homo sapiens]                       32   3.7  

>gi|8051636 tRNA exportin [Homo sapiens]
          Length = 962

 Score = 1896 bits (4912), Expect = 0.0
 Identities = 962/962 (100%), Positives = 962/962 (100%)

Query: 1   MDEQALLGLNPNADSDFRQRALAYFEQLKISPDAWQVCAEALAQRTYSDDHVKFFCFQVL 60
           MDEQALLGLNPNADSDFRQRALAYFEQLKISPDAWQVCAEALAQRTYSDDHVKFFCFQVL
Sbjct: 1   MDEQALLGLNPNADSDFRQRALAYFEQLKISPDAWQVCAEALAQRTYSDDHVKFFCFQVL 60

Query: 61  EHQVKYKYSELTTVQQQLIRETLISWLQAQMLNPQPEKTFIRNKAAQVFALLFVTEYLTK 120
           EHQVKYKYSELTTVQQQLIRETLISWLQAQMLNPQPEKTFIRNKAAQVFALLFVTEYLTK
Sbjct: 61  EHQVKYKYSELTTVQQQLIRETLISWLQAQMLNPQPEKTFIRNKAAQVFALLFVTEYLTK 120

Query: 121 WPKFFFDILSVVDLNPRGVDLYLRILMAIDSELVDRDVVHTSEEARRNTLIKDTMREQCI 180
           WPKFFFDILSVVDLNPRGVDLYLRILMAIDSELVDRDVVHTSEEARRNTLIKDTMREQCI
Sbjct: 121 WPKFFFDILSVVDLNPRGVDLYLRILMAIDSELVDRDVVHTSEEARRNTLIKDTMREQCI 180

Query: 181 PNLVESWYQILQNYQFTNSEVTCQCLEVVGAYVSWIDLSLIANDRFINMLLGHMSIEVLR 240
           PNLVESWYQILQNYQFTNSEVTCQCLEVVGAYVSWIDLSLIANDRFINMLLGHMSIEVLR
Sbjct: 181 PNLVESWYQILQNYQFTNSEVTCQCLEVVGAYVSWIDLSLIANDRFINMLLGHMSIEVLR 240

Query: 241 EEACDCLFEVVNKGMDPVDKMKLVESLCQVLQSAGFFSIDQEEDVDFLARFSKLVNGMGQ 300
           EEACDCLFEVVNKGMDPVDKMKLVESLCQVLQSAGFFSIDQEEDVDFLARFSKLVNGMGQ
Sbjct: 241 EEACDCLFEVVNKGMDPVDKMKLVESLCQVLQSAGFFSIDQEEDVDFLARFSKLVNGMGQ 300

Query: 301 SLIVSWSKLIKNGDIKNAQEALQAIETKVALMLQLLIHEDDDISSNIIGFCYDYLHILKQ 360
           SLIVSWSKLIKNGDIKNAQEALQAIETKVALMLQLLIHEDDDISSNIIGFCYDYLHILKQ
Sbjct: 301 SLIVSWSKLIKNGDIKNAQEALQAIETKVALMLQLLIHEDDDISSNIIGFCYDYLHILKQ 360

Query: 361 LTVLSDQQKANVEAIMLAVMKKLTYDEEYNFENEGEDEAMFVEYRKQLKLLLDRLAQVSP 420
           LTVLSDQQKANVEAIMLAVMKKLTYDEEYNFENEGEDEAMFVEYRKQLKLLLDRLAQVSP
Sbjct: 361 LTVLSDQQKANVEAIMLAVMKKLTYDEEYNFENEGEDEAMFVEYRKQLKLLLDRLAQVSP 420

Query: 421 ELLLASVRRVFSSTLQNWQTTRFMEVEVAIRLLYMLAEALPVSHGAHFSGDVSKASALQD 480
           ELLLASVRRVFSSTLQNWQTTRFMEVEVAIRLLYMLAEALPVSHGAHFSGDVSKASALQD
Sbjct: 421 ELLLASVRRVFSSTLQNWQTTRFMEVEVAIRLLYMLAEALPVSHGAHFSGDVSKASALQD 480

Query: 481 MMRTLVTSGVSSYQHTSVTLEFFETVVRYEKFFTVEPQHIPCVLMAFLDHRGLRHSSAKV 540
           MMRTLVTSGVSSYQHTSVTLEFFETVVRYEKFFTVEPQHIPCVLMAFLDHRGLRHSSAKV
Sbjct: 481 MMRTLVTSGVSSYQHTSVTLEFFETVVRYEKFFTVEPQHIPCVLMAFLDHRGLRHSSAKV 540

Query: 541 RSRTAYLFSRFVKSLNKQMNPFIEDILNRIQDLLELSPPENGHQSLLSSDDQLFIYETAG 600
           RSRTAYLFSRFVKSLNKQMNPFIEDILNRIQDLLELSPPENGHQSLLSSDDQLFIYETAG
Sbjct: 541 RSRTAYLFSRFVKSLNKQMNPFIEDILNRIQDLLELSPPENGHQSLLSSDDQLFIYETAG 600

Query: 601 VLIVNSEYPAERKQALMRNLLTPLMEKFKILLEKLMLAQDEERQASLADCLNHAVGFASR 660
           VLIVNSEYPAERKQALMRNLLTPLMEKFKILLEKLMLAQDEERQASLADCLNHAVGFASR
Sbjct: 601 VLIVNSEYPAERKQALMRNLLTPLMEKFKILLEKLMLAQDEERQASLADCLNHAVGFASR 660

Query: 661 TSKAFSNKQTVKQCGCSEVYLDCLQTFLPALSCPLQKDILRSGVRTFLHRMIICLEEEVL 720
           TSKAFSNKQTVKQCGCSEVYLDCLQTFLPALSCPLQKDILRSGVRTFLHRMIICLEEEVL
Sbjct: 661 TSKAFSNKQTVKQCGCSEVYLDCLQTFLPALSCPLQKDILRSGVRTFLHRMIICLEEEVL 720

Query: 721 PFIPSASEHMLKDCEAKDLQEFIPLINQITAKFKIQVSPFLQQMFMPLLHAIFEVLLRPA 780
           PFIPSASEHMLKDCEAKDLQEFIPLINQITAKFKIQVSPFLQQMFMPLLHAIFEVLLRPA
Sbjct: 721 PFIPSASEHMLKDCEAKDLQEFIPLINQITAKFKIQVSPFLQQMFMPLLHAIFEVLLRPA 780

Query: 781 EENDQSAALEKQMLRRSYFAFLQTVTGSGMSEVIANQGAENVERVLVTVIQGAVEYPDPI 840
           EENDQSAALEKQMLRRSYFAFLQTVTGSGMSEVIANQGAENVERVLVTVIQGAVEYPDPI
Sbjct: 781 EENDQSAALEKQMLRRSYFAFLQTVTGSGMSEVIANQGAENVERVLVTVIQGAVEYPDPI 840

Query: 841 AQKTCFIILSKLVELWGGKDGPVGFADFVYKHIVPACFLAPLKQTFDLADAQTVLALSEC 900
           AQKTCFIILSKLVELWGGKDGPVGFADFVYKHIVPACFLAPLKQTFDLADAQTVLALSEC
Sbjct: 841 AQKTCFIILSKLVELWGGKDGPVGFADFVYKHIVPACFLAPLKQTFDLADAQTVLALSEC 900

Query: 901 AVTLKTIHLKRGPECVQYLQQEYLPSLQVAPEIIQEFCQALQQPDAKVFKNYLKVFFQRA 960
           AVTLKTIHLKRGPECVQYLQQEYLPSLQVAPEIIQEFCQALQQPDAKVFKNYLKVFFQRA
Sbjct: 901 AVTLKTIHLKRGPECVQYLQQEYLPSLQVAPEIIQEFCQALQQPDAKVFKNYLKVFFQRA 960

Query: 961 KP 962
           KP
Sbjct: 961 KP 962


>gi|22748937 exportin 5 [Homo sapiens]
          Length = 1204

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 144/726 (19%), Positives = 283/726 (38%), Gaps = 124/726 (17%)

Query: 9   LNPNADSDFRQRALAYFEQLKISPDAWQVCAEALAQRTYSDDHVKFFCFQVLEHQVKYKY 68
           ++PN+   +R  AL + E+ K        C   LA++T     V+ F  Q+LEH VK+++
Sbjct: 21  MDPNSTQRYRLEALKFCEEFKEKCPICVPCGLRLAEKTQVAI-VRHFGLQILEHVVKFRW 79

Query: 69  SELTTVQQQLIRETLISWLQAQMLNPQPEKTFIRNKAAQVFALLFVTEYLTKWPKFFFDI 128
           + ++ +++  ++ +++  +    LN   E+  I++  +++   +   E+   WP    ++
Sbjct: 80  NGMSRLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHWPDMLIEL 139

Query: 129 LSVVDLNPRGVDLYLRILMAIDSELVD---------RDVVHTSEE--ARRNTLIKDTMRE 177
            ++        +L + IL+ +  ++V          RD+  T  +   R  + + +T++E
Sbjct: 140 DTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQE 199

Query: 178 QCIPNLVESWYQI-LQNYQFTNSEVTCQ----CLEVVGAYVSWIDLSLIA--NDRFINML 230
                 V  + Q+     Q + ++  C+     L  +  Y+ W+ +S I   N + + +L
Sbjct: 200 N-----VNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEIL 254

Query: 231 LGHMSIEVLREEACDCLFEVVNKGMDPVDKMKL--------------------------- 263
              ++ + L+  A +CL   V++     D+  L                           
Sbjct: 255 CLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQTADGGGLVEK 314

Query: 264 ----VESLCQVLQSAG---FFSIDQEEDVDFLARFSKLVNG-----------MGQSLIVS 305
               ++ LCQVL + G      +  + DV+  + F K +             +  S  ++
Sbjct: 315 HYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMT 374

Query: 306 WSKLIKNGDIKNAQEALQAIETKV--ALMLQLL----IHEDDDISSNIIGFCYDYLHILK 359
           W  L ++ +I +    L AI  K   A M  L+      + D  S     F +D      
Sbjct: 375 WGALFRH-EILSRDPLLLAIIPKYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFN 433

Query: 360 QLTVLSDQQKANVEAIMLAVMKKLTYDEEYNFENEGEDEAMFVEYRKQLKLLLDRLAQVS 419
                S  Q+  V  +   +      D + +F+  GE    +++Y  QL   LD  +  S
Sbjct: 434 AFFNSSRAQQGEVMRLACRL------DPKTSFQMAGE----WLKY--QLSTFLDAGSVNS 481

Query: 420 PELL---LASVRRVFSSTLQNWQT-TRFMEVEVAIRLLYMLAEALPVSHGAHFSGDVSKA 475
              +     S+  VFS +   W+  T F+E  +      +  E +PV+ G      V   
Sbjct: 482 CSAVGTGEGSLCSVFSPSFVQWEAMTLFLESVITQMFRTLNREEIPVNDGIELLQMVLNF 541

Query: 476 SALQDMMRTLVTSGVSS-YQHTSVTLEF----FETVVRYEKFFTVEPQHIPCVLMAFLDH 530
                ++ + V + VS+ +   +   EF    F  +     F TVE    P         
Sbjct: 542 DTKDPLILSCVLTNVSALFPFVTYRPEFLPQVFSKLFSSVTFETVEESKAPRT------- 594

Query: 531 RGLRHSSAKVRSRTAYLFSRFVKSLNKQMNPFIEDILNRIQDLLELSPPENGHQSLLSSD 590
           R +R+    VR        +  +   + + P  + + N ++ LL        ++ LL+  
Sbjct: 595 RAVRN----VRRHACSSIIKMCRDYPQLVLPNFDMLYNHVKQLL-------SNELLLTQM 643

Query: 591 DQLFIYETAGVLIVNSEYPAERKQALMRNLLTPLMEKFKILLEKLMLAQDEERQASLADC 650
           ++  + E A VLI N     ER++  +  L+ P        +  + L+QD  R  S  D 
Sbjct: 644 EKCALME-ALVLISNQFKNYERQKVFLEELMAP--------VASIWLSQDMHRVLSDVDA 694

Query: 651 LNHAVG 656
               VG
Sbjct: 695 FIAYVG 700


>gi|224831257 importin 13 [Homo sapiens]
          Length = 963

 Score = 36.6 bits (83), Expect = 0.12
 Identities = 50/270 (18%), Positives = 106/270 (39%), Gaps = 14/270 (5%)

Query: 3   EQALLGLNPNADSDFRQRALAYFEQLKISPDAWQVCAEALAQRTYSDDHVKFFCFQVLEH 62
           E+AL  L  + + + +  A  +  Q ++SP AW    + L      +  +++F    L  
Sbjct: 27  EKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVPE--IQYFGASALHI 84

Query: 63  QVKYKYSELTTVQQQLIRETLISWLQAQMLNPQPEKTFIRNKAAQVFALLFVTEYLTKWP 122
           ++   +S++ T Q     E+L + L  Q+         +  +     A L ++     WP
Sbjct: 85  KISRYWSDIPTDQY----ESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWP 140

Query: 123 KFFFDILSVVDLNPRGVDLYLRILMAIDSELVDRDVVHTSEEAR-RNTLIKDTMREQCIP 181
               D++ +       VD   R L  ++   V  +   TS   + R  L++ ++  +C  
Sbjct: 141 CAVADMVRLFQAEDSPVDGQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAVEC-- 198

Query: 182 NLVESWYQILQNYQFTNSEVTCQCLEVVGAYVSWIDLSLIANDRFINMLLGHMSIEVLRE 241
               + + +L+      S  +C   +V+  + SW+ L +   D     L+      +   
Sbjct: 199 ---GAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQD--CEALIQAAFAALQDS 253

Query: 242 EACDCLFEVVNKGMDPVDKMKLVESLCQVL 271
           E  D   E +   +   D  + V +L +++
Sbjct: 254 ELFDSSVEAIVNAISQPDAQRYVNTLLKLI 283


>gi|6912734 transportin 3 [Homo sapiens]
          Length = 923

 Score = 36.6 bits (83), Expect = 0.12
 Identities = 58/313 (18%), Positives = 129/313 (41%), Gaps = 31/313 (9%)

Query: 4   QALLGLNPNADSDFRQRALAYFEQLKISPDAWQVCAEALAQRTYSDDHVKFFCFQVLEHQ 63
           QA+  L  + D   ++RA  +  +L+ S  AW++  + L  R   D    +F  Q ++ +
Sbjct: 13  QAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQIR--QDVESCYFAAQTMKMK 70

Query: 64  VKYKYSELTTVQQQLIRETLISWLQAQMLNPQPEKTFIRNKAAQVFALLFVTEYLTKWPK 123
           ++  + EL T     +R++L++ +Q    N +     I  + A   A L +   +  W  
Sbjct: 71  IQTSFYELPTDSHASLRDSLLTHIQ----NLKDLSPVIVTQLALAIADLAL--QMPSWKG 124

Query: 124 FFFDILSVVDLNPRGVDLYLRILMAIDSELVDRDVVHTSEEARRNTLIKDTMREQCIPNL 183
               ++     +   +   L IL  +  E+  R +   +   RR  +I+D        + 
Sbjct: 125 CVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGAN--RRTEIIEDL---AFYSST 179

Query: 184 VESWYQILQNYQFTNSEVTCQCLEVVGAYVSWIDLSLIANDRFINMLLGHMSIEVLREE- 242
           V S          T+ ++  +    +G   SW +L ++ ++   N  L  +  EVL+++ 
Sbjct: 180 VVSLLMTCVEKAGTDEKMLMKVFRCLG---SWFNLGVLDSNFMANNKLLALLFEVLQQDK 236

Query: 243 ------------ACDCLFEVVNKGMDPVDKMKLVESLCQVLQSAGFFSIDQEEDVDFLAR 290
                        C  L+ + N   +    M+L + +   L++A   ++   ED+D +  
Sbjct: 237 TSSNLHEAASDCVCSALYAIENVETNLPLAMQLFQGVL-TLETAYHMAV-AREDLDKVLN 294

Query: 291 FSKLVNGMGQSLI 303
           + ++   + ++ +
Sbjct: 295 YCRIFTELCETFL 307


>gi|17978477 vacuolar protein sorting 11 [Homo sapiens]
          Length = 941

 Score = 36.2 bits (82), Expect = 0.15
 Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 35/185 (18%)

Query: 306 WSKLIKNGDIKNAQEALQAI--------ETKVALMLQLLIHEDDDISSNII-GFCYDYLH 356
           W   I+  DIKN QEAL+ I        E+ +    ++L+H   + ++ ++ G C DY  
Sbjct: 514 WYLKIQLEDIKNYQEALRYIGKLPFEQAESNMKRYGKILMHHIPEQTTQLLKGLCTDYRP 573

Query: 357 ILKQLTVLSDQQKANVEAIMLAVMKKLTYDEEYNFENEGEDEAMFVEYRKQLKLLLDRLA 416
            L+     SD++     A                  N  E   +F    ++LK  L+ ++
Sbjct: 574 SLEGR---SDREAPGCRA------------------NSEEFIPIFANNPRELKAFLEHMS 612

Query: 417 QVSPELLLASVRRVFSSTLQNWQTTRFMEVEVAIRLLYMLAEALPVSHGAHFSGDVSKAS 476
           +V P+        +    LQNW   +  +V+  +      AEA+ +     F     KA 
Sbjct: 613 EVQPDSPQGIYDTLLELRLQNWAHEKDPQVKEKLH-----AEAISLLKSGRFCDVFDKAL 667

Query: 477 ALQDM 481
            L  M
Sbjct: 668 VLCQM 672


>gi|197333695 poly(A)-specific ribonuclease (deadenylation nuclease)
           isoform 2 [Homo sapiens]
          Length = 578

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 15/149 (10%)

Query: 554 SLNKQMNPFIEDILNRIQDLLELSPPENGHQSLLSSDDQLFIYETAGVLIVNSEYPAERK 613
           ++ +    FI+ ++ +I+DLL+    +N      +   +  IY+T     ++ +YP   K
Sbjct: 111 TIPEDQKKFIDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQT-----LSWKYP---K 162

Query: 614 QALMRNLLTPLMEKFKILL---EKLMLAQDEERQASLADCLNHAVGFASRTSKAFSNKQT 670
              +  L T   E++ ++    E+    +++++ A   + LN AVGF SR   A +N  +
Sbjct: 163 GIHVETLETEKKERYIVISKVDEEERKRREQQKHAKEQEELNDAVGF-SRVIHAIAN--S 219

Query: 671 VKQCGCSEVYLDCLQTFLPALSCPLQKDI 699
            K      + LD + T +    CPL  D+
Sbjct: 220 GKLVIGHNMLLDVMHT-VHQFYCPLPADL 247


>gi|4505611 poly(A)-specific ribonuclease (deadenylation nuclease)
           isoform 1 [Homo sapiens]
          Length = 639

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 15/149 (10%)

Query: 554 SLNKQMNPFIEDILNRIQDLLELSPPENGHQSLLSSDDQLFIYETAGVLIVNSEYPAERK 613
           ++ +    FI+ ++ +I+DLL+    +N      +   +  IY+T     ++ +YP   K
Sbjct: 172 TIPEDQKKFIDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQT-----LSWKYP---K 223

Query: 614 QALMRNLLTPLMEKFKILL---EKLMLAQDEERQASLADCLNHAVGFASRTSKAFSNKQT 670
              +  L T   E++ ++    E+    +++++ A   + LN AVGF SR   A +N  +
Sbjct: 224 GIHVETLETEKKERYIVISKVDEEERKRREQQKHAKEQEELNDAVGF-SRVIHAIAN--S 280

Query: 671 VKQCGCSEVYLDCLQTFLPALSCPLQKDI 699
            K      + LD + T +    CPL  D+
Sbjct: 281 GKLVIGHNMLLDVMHT-VHQFYCPLPADL 308


>gi|82546830 SEC8 protein isoform a [Homo sapiens]
          Length = 974

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 21/198 (10%)

Query: 633 EKLMLAQDEERQAS----LADCLNHAVGFASRTSKAFSNKQTVKQCGCSEVYLDCLQTFL 688
           +KL+  QD  R  S    LA+        ASRT  AFSN  T +    S        T L
Sbjct: 692 DKLIPPQDILRDVSDLKALANMHESLEWLASRTKSAFSNLSTSQM--LSPAQDSHTNTDL 749

Query: 689 PALSCPLQKDI--LRSGVRTFLHRMIICLEEEV--------LPFIPSASEHMLKDCEAKD 738
           P +S  + + +  L    +    R ++ L  EV        +P     +  ++ + E+ D
Sbjct: 750 PPVSEQIMQTLSELAKSFQDMADRCLLVLHLEVRVHCFHYLIPLAKEGNYAIVANVESMD 809

Query: 739 LQEFIPLINQITAKFKIQVSPFLQQ-----MFMPLLHAIFEVLLRPAEENDQSAALEKQM 793
               +  +N+  +  +  +S  LQQ     +F  L H I  +L+  A+   + +    + 
Sbjct: 810 YDPLVVKLNKDISAIEEAMSASLQQHKFQYIFEGLGHLISCILINGAQYFRRISESGIKK 869

Query: 794 LRRSYFAFLQTVTGSGMS 811
           + R+ F   Q +T   MS
Sbjct: 870 MCRNIFVLQQNLTNITMS 887


>gi|118498354 component of oligomeric golgi complex 4 [Homo sapiens]
          Length = 789

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 15/122 (12%)

Query: 697 KDILRSGVRTFLHRMIICLEEEVLPFIPS-------ASEHMLKDCEAKD--LQEFIPLIN 747
           +D+L+ G+ T L+   I  + +V P+I S         E    D EA D  +Q+FI  + 
Sbjct: 605 RDLLQEGL-TELNSTAI--KPQVQPWINSFFSVSHNIEEEEFNDYEANDPWVQQFILNLE 661

Query: 748 QITAKFKIQVSPFLQQMFMPLLHAIFEVLLRPA---EENDQSAALEKQMLRRSYFAFLQT 804
           Q  A+FK  +SP +      L+ ++  V L         ++   L+     RS  A+L T
Sbjct: 662 QQMAEFKASLSPVIYDSLTGLMTSLVAVELEKVVLKSTFNRLGGLQFDKELRSLIAYLTT 721

Query: 805 VT 806
           VT
Sbjct: 722 VT 723


>gi|21361794 TIP120 protein [Homo sapiens]
          Length = 1230

 Score = 31.6 bits (70), Expect = 3.7
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 371 NVEAIMLAVMKKLTYDEEYNFENEGEDE 398
           +V  I+   +K LTYD  YN+++E EDE
Sbjct: 293 HVSTIINICLKYLTYDPNYNYDDEDEDE 320


>gi|126032338 ryanodine receptor 3 [Homo sapiens]
          Length = 4870

 Score = 31.6 bits (70), Expect = 3.7
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)

Query: 537 SAKVRSRTAYLFSRFVKSLNKQMNPF---IEDILNRIQDLLE-LSPPE 580
           +A++   T  LFS+FV   N+   P    IE++L  +QDL+    PPE
Sbjct: 407 AARIIRNTTALFSQFVSGNNRTAAPITLPIEEVLQTLQDLIAYFQPPE 454


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.136    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,128,655
Number of Sequences: 37866
Number of extensions: 1296610
Number of successful extensions: 3258
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3248
Number of HSP's gapped (non-prelim): 18
length of query: 962
length of database: 18,247,518
effective HSP length: 112
effective length of query: 850
effective length of database: 14,006,526
effective search space: 11905547100
effective search space used: 11905547100
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.