Guide to the Human Genome
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Name: RPS9 Sequence: fasta or formatted (194aa) NCBI GI: 14141193
Description:

ribosomal protein S9

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         10           2
 C cysteine            0.5          1           1
 D aspartate           5.7         11           2
 E glutamate           6.7         13           3
 F phenylalanine       3.6          7           1
 G glycine             8.2         16           3
 H histidine           2.1          4           2
 I isoleucine          5.7         11           1
 K lysine              9.8         19           2
 L leucine            11.9         23           2
 M methionine          1.0          2           1
 N asparagine          2.1          4           1
 P proline             3.6          7           1
 Q glutamine           3.6          7           1
 R arginine           13.9         27           2
 S serine              3.6          7           1
 T threonine           2.6          5           1
 V valine              7.2         14           2
 W tryptophan          1.0          2           1
 Y tyrosine            2.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein S9 
IMP3                  0.094   U3 snoRNP protein 3 homolog 
RBM12B                0.033   RNA binding motif protein 12B 
TBRG1                 0.011   transforming growth factor beta regulator 1 
KIF3B                 0.008   kinesin family member 3B 
GTF3C1                0.008   general transcription factor IIIC, polypeptide 1, a...
CALN1                 0.008   calneuron 1 isoform 1 
LOC100293149          0.008   PREDICTED: similar to protein phosphatase 1, regula...
PPP1R3F               0.008   protein phosphatase 1, regulatory (inhibitor) subuni...
CABLES2               0.006   Cdk5 and Abl enzyme substrate 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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