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Search of human proteins with 14042933
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14042933 transmembrane protein 133 [Homo sapiens]
(129 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14042933 transmembrane protein 133 [Homo sapiens] 273 4e-74
gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens] 27 3.4
gi|115648063 solute carrier family 7 (cationic amino acid transp... 27 3.4
gi|115648022 solute carrier family 7 (cationic amino acid transp... 27 3.4
gi|239753186 PREDICTED: hypothetical protein [Homo sapiens] 27 4.5
gi|239747760 PREDICTED: hypothetical protein XP_002348241 [Homo ... 27 4.5
gi|239741626 PREDICTED: hypothetical protein XP_002342265 [Homo ... 27 4.5
gi|52353348 olfactory receptor, family 8, subfamily A, member 1 ... 27 4.5
gi|34147456 TBC domain-containing protein kinase-like [Homo sapi... 27 5.8
gi|47578115 DEP domain containing 2 isoform a [Homo sapiens] 27 5.8
gi|239756873 PREDICTED: hypothetical protein [Homo sapiens] 26 7.6
gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sap... 26 9.9
gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapi... 26 9.9
>gi|14042933 transmembrane protein 133 [Homo sapiens]
Length = 129
Score = 273 bits (697), Expect = 4e-74
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MTSHHCVGPGNHISWSGHEKEHRLDYCPEVTFPLTKGFPLGYTLLFNFASYPFLLPSKIK 60
MTSHHCVGPGNHISWSGHEKEHRLDYCPEVTFPLTKGFPLGYTLLFNFASYPFLLPSKIK
Sbjct: 1 MTSHHCVGPGNHISWSGHEKEHRLDYCPEVTFPLTKGFPLGYTLLFNFASYPFLLPSKIK 60
Query: 61 TLLRNKDSFLNILCPACLLLIRRCNIEYSSTGLNFLNTFTVSLIVTVIPLLQNVPVPLGN 120
TLLRNKDSFLNILCPACLLLIRRCNIEYSSTGLNFLNTFTVSLIVTVIPLLQNVPVPLGN
Sbjct: 61 TLLRNKDSFLNILCPACLLLIRRCNIEYSSTGLNFLNTFTVSLIVTVIPLLQNVPVPLGN 120
Query: 121 NVGKMQVYE 129
NVGKMQVYE
Sbjct: 121 NVGKMQVYE 129
>gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens]
Length = 3661
Score = 27.3 bits (59), Expect = 3.4
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 48 FASYPFLLPSKIKTLLRNKDS-FLNILCPACLLLIRRCNIEYSSTGLNFLNTFTV 101
F+S L+ + ++++L N D+ L C C+LL+ RC ST NF +T +
Sbjct: 269 FSSVMQLVMTSLQSILENVDTPELLCKCVKCILLVARCYPHIFST--NFRDTVDI 321
>gi|115648063 solute carrier family 7 (cationic amino acid
transporter, y+ system), member 6 [Homo sapiens]
Length = 515
Score = 27.3 bits (59), Expect = 3.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 72 ILCPACLLLIRRCNIEYSSTGLNFLNTFTVSLIVTVIPLL 111
+L AC+ L+ N Y G +TFT + +V +I ++
Sbjct: 168 LLAAACICLLTFVNCAYVKWGTRVQDTFTYAKVVALIAII 207
>gi|115648022 solute carrier family 7 (cationic amino acid
transporter, y+ system), member 6 [Homo sapiens]
Length = 515
Score = 27.3 bits (59), Expect = 3.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 72 ILCPACLLLIRRCNIEYSSTGLNFLNTFTVSLIVTVIPLL 111
+L AC+ L+ N Y G +TFT + +V +I ++
Sbjct: 168 LLAAACICLLTFVNCAYVKWGTRVQDTFTYAKVVALIAII 207
>gi|239753186 PREDICTED: hypothetical protein [Homo sapiens]
Length = 110
Score = 26.9 bits (58), Expect = 4.5
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 33 PLTKGFPLGYTLLFNFASYPFL--LPSKIKTLLRNKDSF--LNILCPACLLLI 81
PL+ G P G+TL ++P + + + LL N D+ L IL P + LI
Sbjct: 45 PLSSGLPSGHTLAHGLLAHPLIGGVTGHVIPLLLNLDTVFSLPILVPPVVRLI 97
>gi|239747760 PREDICTED: hypothetical protein XP_002348241 [Homo
sapiens]
Length = 110
Score = 26.9 bits (58), Expect = 4.5
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 33 PLTKGFPLGYTLLFNFASYPFL--LPSKIKTLLRNKDSF--LNILCPACLLLI 81
PL+ G P G+TL ++P + + + LL N D+ L IL P + LI
Sbjct: 45 PLSSGLPSGHTLAHGLLAHPLIGGVTGHVIPLLLNLDTVFSLPILVPPVVRLI 97
>gi|239741626 PREDICTED: hypothetical protein XP_002342265 [Homo
sapiens]
Length = 110
Score = 26.9 bits (58), Expect = 4.5
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 33 PLTKGFPLGYTLLFNFASYPFL--LPSKIKTLLRNKDSF--LNILCPACLLLI 81
PL+ G P G+TL ++P + + + LL N D+ L IL P + LI
Sbjct: 45 PLSSGLPSGHTLAHGLLAHPLIGGVTGHVIPLLLNLDTVFSLPILVPPVVRLI 97
>gi|52353348 olfactory receptor, family 8, subfamily A, member 1
[Homo sapiens]
Length = 326
Score = 26.9 bits (58), Expect = 4.5
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 13/112 (11%)
Query: 26 YCPEVTFPLTKGFPLGYTLLFNFASYPFLLPSKIKTLLRNKDSFLNILCPACLLLIRRCN 85
Y E+T + GF + T L SY F+L S + S C + L +
Sbjct: 209 YDVEMTVFFSAGFNIIVTSLTVLVSYTFILSSILGISTTEGRSKAFSTCSSHLAAV---G 265
Query: 86 IEYSSTGLNFLNTFTVSLI----------VTVIPLLQNVPVPLGNNVGKMQV 127
+ Y ST +L T+S + TVIP+L + L N K V
Sbjct: 266 MFYGSTAFMYLKPSTISSLTQENVASVFYTTVIPMLNPLIYSLRNKEVKAAV 317
>gi|34147456 TBC domain-containing protein kinase-like [Homo
sapiens]
Length = 830
Score = 26.6 bits (57), Expect = 5.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 32 FPLTKGFPLGYTLLFNFASYPFLLPSKIKTLLRNK 66
FPL K F L TLL +S+PF + I LR++
Sbjct: 572 FPLHKIFHLWDTLLLGNSSFPFCIGVAILQQLRDR 606
>gi|47578115 DEP domain containing 2 isoform a [Homo sapiens]
Length = 1606
Score = 26.6 bits (57), Expect = 5.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 52 PFLLPSKIKTLLRNKDSFLNILCPACLLLIRRCNIEYSSTGLNFLNTFTVSLIVTV 107
P+ LPS ++TL +N F+ + C LL+ S T L F +L+ TV
Sbjct: 1222 PWNLPSSVRTLAQNIRKFVEEV--KCRLLLALLEYSDSETQLRRDMVFCQTLVATV 1275
>gi|239756873 PREDICTED: hypothetical protein [Homo sapiens]
Length = 123
Score = 26.2 bits (56), Expect = 7.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 9 PGNHISWSGHEKEHRLDYCPEVT 31
PGN S H++E R CP+ T
Sbjct: 78 PGNTSGCSSHQREPRTGNCPQAT 100
>gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo
sapiens]
Length = 1003
Score = 25.8 bits (55), Expect = 9.9
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
Query: 9 PGNHISWSGHEKEHRLDYCPEVTFPLTKGFPLGYTLLFNFASYPFLL--------PSKIK 60
PG + +G ++ P + PLT+ LGY+LL +Y L P I
Sbjct: 671 PGGQLVLAGDPRQ----LGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFIT 726
Query: 61 TLLRNKDSFLNIL 73
LLRN S IL
Sbjct: 727 KLLRNYRSHPTIL 739
>gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo
sapiens]
Length = 1003
Score = 25.8 bits (55), Expect = 9.9
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
Query: 9 PGNHISWSGHEKEHRLDYCPEVTFPLTKGFPLGYTLLFNFASYPFLL--------PSKIK 60
PG + +G ++ P + PLT+ LGY+LL +Y L P I
Sbjct: 671 PGGQLVLAGDPRQ----LGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFIT 726
Query: 61 TLLRNKDSFLNIL 73
LLRN S IL
Sbjct: 727 KLLRNYRSHPTIL 739
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.142 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,379,859
Number of Sequences: 37866
Number of extensions: 217653
Number of successful extensions: 570
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 565
Number of HSP's gapped (non-prelim): 13
length of query: 129
length of database: 18,247,518
effective HSP length: 90
effective length of query: 39
effective length of database: 14,839,578
effective search space: 578743542
effective search space used: 578743542
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.