Guide to the Human Genome
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Name: ORMDL2 Sequence: fasta or formatted (153aa) NCBI GI: 7661820
Description:

ORMDL2

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2          8           2
 C cysteine            0.0          0           0
 D aspartate           2.0          3           1
 E glutamate           2.0          3           1
 F phenylalanine       6.5         10           2
 G glycine             5.2          8           1
 H histidine           4.6          7           1
 I isoleucine          6.5         10           2
 K lysine              3.9          6           1
 L leucine            14.4         22           2
 M methionine          2.6          4           1
 N asparagine          5.2          8           1
 P proline             5.2          8           1
 Q glutamine           2.6          4           1
 R arginine            3.3          5           1
 S serine              7.2         11           2
 T threonine           7.2         11           1
 V valine              9.8         15           2
 W tryptophan          2.0          3           1
 Y tyrosine            4.6          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ORMDL2 
ORMDL1                0.881   ORM1-like 1 
ORMDL1                0.881   ORM1-like 1 
ORMDL3                0.874   ORM1-like 3 
CFTR                  0.014   cystic fibrosis transmembrane conductance regulator ...
LAMA5                 0.010   laminin alpha 5 
OR8K3                 0.010   olfactory receptor, family 8, subfamily K, member 3 ...
TNIK                  0.007   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.007   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.007   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.007   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.007   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.007   TRAF2 and NCK interacting kinase isoform 3 
TNIK                  0.007   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.007   TRAF2 and NCK interacting kinase isoform 1 
ATG4D                 0.007   APG4 autophagy 4 homolog D 
MBOAT1                0.007   membrane bound O-acyltransferase domain containing ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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