Guide to the Human Genome
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Search of human proteins with 7661536

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7661536 B9 protein [Homo sapiens]
         (204 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7661536 B9 protein [Homo sapiens]                                  426   e-120
gi|226371646 B9 protein domain 2 [Homo sapiens]                        77   8e-15
gi|89242137 Meckel syndrome, type 1 [Homo sapiens]                     54   1e-07
gi|154240720 hypothetical protein LOC134145 [Homo sapiens]             30   1.4  
gi|169214048 PREDICTED: hypothetical protein [Homo sapiens]            28   4.1  
gi|89057602 PREDICTED: hypothetical protein [Homo sapiens]             28   4.1  
gi|37551995 PREDICTED: hypothetical protein [Homo sapiens]             28   4.1  
gi|226371743 phosphatidylinositol-5-phosphate 4-kinase, type II,...    28   5.4  
gi|226371741 phosphatidylinositol-5-phosphate 4-kinase, type II,...    28   5.4  
gi|226371739 phosphatidylinositol-5-phosphate 4-kinase, type II,...    28   5.4  
gi|226371737 phosphatidylinositol-5-phosphate 4-kinase, type II,...    28   5.4  

>gi|7661536 B9 protein [Homo sapiens]
          Length = 204

 Score =  426 bits (1096), Expect = e-120
 Identities = 204/204 (100%), Positives = 204/204 (100%)

Query: 1   MATASPSVFLLMVNGQVESAQFPEYDDLYCKYCFVYGQDWAPTAGLEEGISQITSKSQDV 60
           MATASPSVFLLMVNGQVESAQFPEYDDLYCKYCFVYGQDWAPTAGLEEGISQITSKSQDV
Sbjct: 1   MATASPSVFLLMVNGQVESAQFPEYDDLYCKYCFVYGQDWAPTAGLEEGISQITSKSQDV 60

Query: 61  RQALVWNFPIDVTFKSTNPYGWPQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTIP 120
           RQALVWNFPIDVTFKSTNPYGWPQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTIP
Sbjct: 61  RQALVWNFPIDVTFKSTNPYGWPQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTIP 120

Query: 121 MFVPESTSKLQKFTSWFMGRRPEYTDPKVVAQGEGREVTRVRSQGFVTLLFNVVTKDMRK 180
           MFVPESTSKLQKFTSWFMGRRPEYTDPKVVAQGEGREVTRVRSQGFVTLLFNVVTKDMRK
Sbjct: 121 MFVPESTSKLQKFTSWFMGRRPEYTDPKVVAQGEGREVTRVRSQGFVTLLFNVVTKDMRK 180

Query: 181 LGYDTGPSDTQGVLGPSPPQSFPQ 204
           LGYDTGPSDTQGVLGPSPPQSFPQ
Sbjct: 181 LGYDTGPSDTQGVLGPSPPQSFPQ 204


>gi|226371646 B9 protein domain 2 [Homo sapiens]
          Length = 175

 Score = 77.4 bits (189), Expect = 8e-15
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 3/172 (1%)

Query: 13  VNGQVESAQFPEYDDLYCKYCFVYGQDWAPTAGLEEGISQITSKSQDVRQALVWNFPIDV 72
           V GQ+  A       L+CK+    G  W   +G+ EG +Q+ +    +     W+ PID+
Sbjct: 6   VIGQIIGASGFSESSLFCKWGIHTGAAWKLLSGVREGQTQVDTPQ--IGDMAYWSHPIDL 63

Query: 73  TFKSTNPYGWPQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTIPMFVPESTSKLQK 132
            F +    GWP++   V+  D FG   + GYG  HVP SPG H+   P + P  + + ++
Sbjct: 64  HFATKGLQGWPRLHFQVWSQDSFGRCQLAGYGFCHVPSSPGTHQLACPTWRPLGSWR-EQ 122

Query: 133 FTSWFMGRRPEYTDPKVVAQGEGREVTRVRSQGFVTLLFNVVTKDMRKLGYD 184
               F+G  P+      +  G  R      + G V L   ++ ++  + G +
Sbjct: 123 LARAFVGGGPQLLHGDTIYSGADRYRLHTAAGGTVHLEIGLLLRNFDRYGVE 174


>gi|89242137 Meckel syndrome, type 1 [Homo sapiens]
          Length = 559

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 6   PSVFLLMVNGQVESAQFPEYDDLYCKYCF-VYGQDWAPTAGLE-EGISQI-TSKSQDVRQ 62
           P    L VNG+V SAQ  EYD+LY  +   +    W+  A  +  G++Q  T+KS  + +
Sbjct: 308 PGALRLFVNGEVVSAQGYEYDNLYVHFFVELPTAHWSSPAFQQLSGVTQTCTTKSLAMDK 367

Query: 63  ALVWNFPIDVTFKSTNPYG---------WPQIVLSVYGPDVFGNDVVRGYGAVHVPFSPG 113
              +++P   TF++   +          WP +   V   D +    V GYGAV +P +PG
Sbjct: 368 VAHFSYPF--TFEAFFLHEDESSDALPEWPVLYCEVLSLDFWQRYRVEGYGAVVLPATPG 425

Query: 114 RHKRTIPMFVPESTSKLQKFTSWFMGRRPEYTD 146
            H  T+  + P     + +   +F+G   E  D
Sbjct: 426 SHTLTVSTWRPVELGTVAELRRFFIGGSLELED 458


>gi|154240720 hypothetical protein LOC134145 [Homo sapiens]
          Length = 233

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 96  GNDVVRGYGAVHVPF-SPGRHKRTIPMFVPESTSKLQKFTSWFMGRRPEYTDPKVVAQGE 154
           G  +V  Y AV  PF +P   K  +P FVP +T +++        RR    D   +  G+
Sbjct: 45  GGTLVAVY-AVATPFVTPALRKVCLP-FVPATTKQIENVVKMLRCRRGSLVD---IGSGD 99

Query: 155 GREVTRVRSQGFVTL 169
           GR V     +GF  +
Sbjct: 100 GRIVIAAAKKGFTAV 114


>gi|169214048 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 881

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 8/57 (14%)

Query: 151 AQGEGREVTRVRSQGFVTLLFNVVTKDMRK--------LGYDTGPSDTQGVLGPSPP 199
           A+ EG E  R+RS+G   L+   V  D  +         G+    +D     GP PP
Sbjct: 346 AESEGAETPRMRSEGDQLLIVRPVRSDHARYTCRVRSPFGHREAAADVSVFYGPDPP 402


>gi|89057602 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 881

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 8/57 (14%)

Query: 151 AQGEGREVTRVRSQGFVTLLFNVVTKDMRK--------LGYDTGPSDTQGVLGPSPP 199
           A+ EG E  R+RS+G   L+   V  D  +         G+    +D     GP PP
Sbjct: 346 AESEGAETPRMRSEGDQLLIVRPVRSDHARYTCRVRSPFGHREAAADVSVFYGPDPP 402


>gi|37551995 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 867

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 8/57 (14%)

Query: 151 AQGEGREVTRVRSQGFVTLLFNVVTKDMRK--------LGYDTGPSDTQGVLGPSPP 199
           A+ EG E  R+RS+G   L+   V  D  +         G+    +D     GP PP
Sbjct: 346 AESEGAETPRMRSEGDQLLIVRPVRSDHARYTCRVRSPFGHREAAADVSVFYGPDPP 402


>gi|226371743 phosphatidylinositol-5-phosphate 4-kinase, type II,
           gamma isoform c [Homo sapiens]
          Length = 373

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 13/103 (12%)

Query: 83  PQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTIPMFVPESTSKLQKFTSWFMG--- 139
           P  ++  YG    G   + GY   H P  PG  +  I ++   S     +   +FMG   
Sbjct: 270 PPALVGSYGTSPEG---IGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLID 326

Query: 140 -------RRPEYTDPKVVAQGEGREVTRVRSQGFVTLLFNVVT 175
                  ++      K V  G G E++ V  + +     + +T
Sbjct: 327 ILTQYDAKKKAAHAAKTVKHGAGAEISTVHPEQYAKRFLDFIT 369


>gi|226371741 phosphatidylinositol-5-phosphate 4-kinase, type II,
           gamma isoform b [Homo sapiens]
          Length = 403

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 13/103 (12%)

Query: 83  PQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTIPMFVPESTSKLQKFTSWFMG--- 139
           P  ++  YG    G   + GY   H P  PG  +  I ++   S     +   +FMG   
Sbjct: 300 PPALVGSYGTSPEG---IGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLID 356

Query: 140 -------RRPEYTDPKVVAQGEGREVTRVRSQGFVTLLFNVVT 175
                  ++      K V  G G E++ V  + +     + +T
Sbjct: 357 ILTQYDAKKKAAHAAKTVKHGAGAEISTVHPEQYAKRFLDFIT 399


>gi|226371739 phosphatidylinositol-5-phosphate 4-kinase, type II,
           gamma isoform a [Homo sapiens]
          Length = 421

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 13/103 (12%)

Query: 83  PQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTIPMFVPESTSKLQKFTSWFMG--- 139
           P  ++  YG    G   + GY   H P  PG  +  I ++   S     +   +FMG   
Sbjct: 318 PPALVGSYGTSPEG---IGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLID 374

Query: 140 -------RRPEYTDPKVVAQGEGREVTRVRSQGFVTLLFNVVT 175
                  ++      K V  G G E++ V  + +     + +T
Sbjct: 375 ILTQYDAKKKAAHAAKTVKHGAGAEISTVHPEQYAKRFLDFIT 417


>gi|226371737 phosphatidylinositol-5-phosphate 4-kinase, type II,
           gamma isoform a [Homo sapiens]
          Length = 421

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 13/103 (12%)

Query: 83  PQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTIPMFVPESTSKLQKFTSWFMG--- 139
           P  ++  YG    G   + GY   H P  PG  +  I ++   S     +   +FMG   
Sbjct: 318 PPALVGSYGTSPEG---IGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLID 374

Query: 140 -------RRPEYTDPKVVAQGEGREVTRVRSQGFVTLLFNVVT 175
                  ++      K V  G G E++ V  + +     + +T
Sbjct: 375 ILTQYDAKKKAAHAAKTVKHGAGAEISTVHPEQYAKRFLDFIT 417


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,497,509
Number of Sequences: 37866
Number of extensions: 356950
Number of successful extensions: 744
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 739
Number of HSP's gapped (non-prelim): 11
length of query: 204
length of database: 18,247,518
effective HSP length: 97
effective length of query: 107
effective length of database: 14,574,516
effective search space: 1559473212
effective search space used: 1559473212
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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