Guide to the Human Genome
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Search of human proteins with 7330335

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7330335 chloride intracellular channel 4 [Homo sapiens]
         (253 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7330335 chloride intracellular channel 4 [Homo sapiens]            512   e-145
gi|82617632 chloride intracellular channel 5 isoform b [Homo sap...   391   e-109
gi|166197662 chloride intracellular channel 5 isoform a [Homo sa...   385   e-107
gi|27894378 chloride intracellular channel 6 [Homo sapiens]           382   e-106
gi|14251209 chloride intracellular channel 1 [Homo sapiens]           337   8e-93
gi|66346733 chloride intracellular channel 2 [Homo sapiens]           329   2e-90
gi|40288290 chloride intracellular channel 3 [Homo sapiens]           230   1e-60
gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens]            42   7e-04
gi|116534990 ankyrin-like protein 1 [Homo sapiens]                     35   0.048
gi|22202624 glutathione transferase zeta 1 isoform 1 [Homo sapiens]    31   1.2  
gi|108773799 ganglioside-induced differentiation-associated prot...    31   1.2  
gi|108773797 ganglioside-induced differentiation-associated prot...    31   1.2  
gi|50658082 centrosomal protein 70 kDa [Homo sapiens]                  30   2.0  
gi|119874201 furry-like [Homo sapiens]                                 30   2.6  
gi|103472003 forkhead box O4 [Homo sapiens]                            29   4.5  
gi|38016131 glutathione S-transferase omega 2 [Homo sapiens]           28   5.9  
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]         28   5.9  
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]         28   5.9  
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]         28   5.9  
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]         28   5.9  
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]         28   5.9  
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]         28   5.9  
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ...    28   5.9  
gi|40254464 leptin receptor isoform 1 [Homo sapiens]                   28   7.7  
gi|33354279 hypothetical protein LOC55425 [Homo sapiens]               28   7.7  

>gi|7330335 chloride intracellular channel 4 [Homo sapiens]
          Length = 253

 Score =  512 bits (1319), Expect = e-145
 Identities = 253/253 (100%), Positives = 253/253 (100%)

Query: 1   MALSMPLNGLKEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLK 60
           MALSMPLNGLKEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLK
Sbjct: 1   MALSMPLNGLKEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLK 60

Query: 61  RKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD 120
           RKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD
Sbjct: 61  RKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD 120

Query: 121 IFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLD 180
           IFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLD
Sbjct: 121 IFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLD 180

Query: 181 GNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEV 240
           GNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEV
Sbjct: 181 GNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEV 240

Query: 241 EIAYSDVAKRLTK 253
           EIAYSDVAKRLTK
Sbjct: 241 EIAYSDVAKRLTK 253


>gi|82617632 chloride intracellular channel 5 isoform b [Homo
           sapiens]
          Length = 251

 Score =  391 bits (1005), Expect = e-109
 Identities = 185/241 (76%), Positives = 216/241 (89%)

Query: 13  EDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPG 72
           +D++P IELFVKAG DGESIGNCPFSQRLFMILWLKGVVF+VTTVDLKRKPADL NLAPG
Sbjct: 10  DDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPG 69

Query: 73  THPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNS 132
           THPPF+TFN +VKTDVNKIEEFLEE L P KY KL+ KH ESNTAG+DIF+KFSAYIKN+
Sbjct: 70  THPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNT 129

Query: 133 RPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLL 192
           + + N ALERGL K L+KLD+YLN+PLP+EID N+  + K S RKFLDG+E+TLADCNLL
Sbjct: 130 KQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLL 189

Query: 193 PKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKRLT 252
           PKLH+VK+VAKKYRN+DIP EMTG+WRYL NAY+RDEFTNTC +D E+E+AY+DVAKRL+
Sbjct: 190 PKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRLS 249

Query: 253 K 253
           +
Sbjct: 250 R 250


>gi|166197662 chloride intracellular channel 5 isoform a [Homo
           sapiens]
          Length = 410

 Score =  385 bits (990), Expect = e-107
 Identities = 186/248 (75%), Positives = 217/248 (87%), Gaps = 3/248 (1%)

Query: 9   GLKEED---KEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPAD 65
           GL+E++     P I LFVKAG DGESIGNCPFSQRLFMILWLKGVVF+VTTVDLKRKPAD
Sbjct: 162 GLEEKEGAHMNPEIYLFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPAD 221

Query: 66  LQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKF 125
           L NLAPGTHPPF+TFN +VKTDVNKIEEFLEE L P KY KL+ KH ESNTAG+DIF+KF
Sbjct: 222 LHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFSKF 281

Query: 126 SAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMT 185
           SAYIKN++ + N ALERGL K L+KLD+YLN+PLP+EID N+  + K S RKFLDG+E+T
Sbjct: 282 SAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELT 341

Query: 186 LADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYS 245
           LADCNLLPKLH+VK+VAKKYRN+DIP EMTG+WRYL NAY+RDEFTNTC +D E+E+AY+
Sbjct: 342 LADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYA 401

Query: 246 DVAKRLTK 253
           DVAKRL++
Sbjct: 402 DVAKRLSR 409


>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
          Length = 686

 Score =  382 bits (980), Expect = e-106
 Identities = 181/233 (77%), Positives = 208/233 (89%)

Query: 19  IELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFI 78
           I LFVKAG DGESIGNCPFSQRLFMILWLKGV+F+VTTVDLKRKPADLQNLAPGT+PPF+
Sbjct: 453 ITLFVKAGYDGESIGNCPFSQRLFMILWLKGVIFNVTTVDLKRKPADLQNLAPGTNPPFM 512

Query: 79  TFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANE 138
           TF+ EVKTDVNKIEEFLEE L PP+Y KL  +HPESN+AG D+FAKFSA+IKN++ +ANE
Sbjct: 513 TFDGEVKTDVNKIEEFLEEKLAPPRYPKLGTQHPESNSAGNDVFAKFSAFIKNTKKDANE 572

Query: 139 ALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPKLHIV 198
             E+ LLK L+KLD YLNSPLPDEID  S ED+  S RKFLDG+E+TLADCNLLPKLHI+
Sbjct: 573 IHEKNLLKALRKLDNYLNSPLPDEIDAYSTEDVTVSGRKFLDGDELTLADCNLLPKLHII 632

Query: 199 KVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKRL 251
           K+VAKKYR+F+ P EMTGIWRYL NAY+RDEFTNTCP+D+E+E AYSDVAKR+
Sbjct: 633 KIVAKKYRDFEFPSEMTGIWRYLNNAYARDEFTNTCPADQEIEHAYSDVAKRM 685


>gi|14251209 chloride intracellular channel 1 [Homo sapiens]
          Length = 241

 Score =  337 bits (863), Expect = 8e-93
 Identities = 160/238 (67%), Positives = 191/238 (80%)

Query: 14  DKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGT 73
           +++P +ELFVKAGSDG  IGNCPFSQRLFM+LWLKGV F+VTTVD KR+   +Q L PG 
Sbjct: 3   EEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGG 62

Query: 74  HPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSR 133
             PF+ + +EV TD NKIEEFLE VLCPP+Y KL+  +PESNTAG+DIFAKFSAYIKNS 
Sbjct: 63  QLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSN 122

Query: 134 PEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLP 193
           P  N+ LE+GLLK L+ LD YL SPLP+E+DE S ED   S RKFLDGNE+TLADCNLLP
Sbjct: 123 PALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLP 182

Query: 194 KLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKRL 251
           KLHIV+VV KKYR F IP+   G+ RYL+NAY+R+EF +TCP D+E+E+AY  VAK L
Sbjct: 183 KLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKAL 240


>gi|66346733 chloride intracellular channel 2 [Homo sapiens]
          Length = 247

 Score =  329 bits (843), Expect = 2e-90
 Identities = 155/235 (65%), Positives = 196/235 (83%)

Query: 16  EPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHP 75
           +P IELFVKAGSDGESIGNCPF QRLFMILWLKGV F+VTTVD+ RKP +L++LAPGT+P
Sbjct: 11  DPEIELFVKAGSDGESIGNCPFCQRLFMILWLKGVKFNVTTVDMTRKPEELKDLAPGTNP 70

Query: 76  PFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPE 135
           PF+ +N E+KTD  KIEEFLE+ L PP+Y  LSPK+ ES   G ++FAKFSAYIKN++ E
Sbjct: 71  PFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESFDVGCNLFAKFSAYIKNTQKE 130

Query: 136 ANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPKL 195
           AN+  E+ LLK  ++LD+YLN+PL DEID +S E+   S R FLDG+++TLADC+LLPKL
Sbjct: 131 ANKNFEKSLLKEFKRLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQLTLADCSLLPKL 190

Query: 196 HIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKR 250
           +I+KV AKKYR+FDIP E +G+WRYL NAY+R+EFT+TCP DKE+E  Y++VAK+
Sbjct: 191 NIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDKEIENTYANVAKQ 245


>gi|40288290 chloride intracellular channel 3 [Homo sapiens]
          Length = 236

 Score =  230 bits (586), Expect = 1e-60
 Identities = 116/229 (50%), Positives = 156/229 (68%), Gaps = 2/229 (0%)

Query: 16  EPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHP 75
           E  ++LFVKA  DGES+G+CP  QRLFM+L LKGV F++TTVD +R P  L++ APG+  
Sbjct: 3   ETKLQLFVKASEDGESVGHCPSCQRLFMVLLLKGVPFTLTTVDTRRSPDVLKDFAPGSQL 62

Query: 76  PFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPE 135
           P + ++S+ KTD  +IE+FLEE L PP +  L+P++ ESNTAG D+F KFSA+IKN  P 
Sbjct: 63  PILLYDSDAKTDTLQIEDFLEETLGPPDFPSLAPRYRESNTAGNDVFHKFSAFIKNPVPA 122

Query: 136 ANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPKL 195
            +EAL + LL+ L +LD YL +PL  E+       ++ S R+FLDG+ +TLADC+LLPKL
Sbjct: 123 QDEALYQQLLRALARLDSYLRAPLEHEL--AGEPQLRESRRRFLDGDRLTLADCSLLPKL 180

Query: 196 HIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAY 244
           HIV  V   +R   IP E+ G+ RYL +A    EF  TCP   E+  AY
Sbjct: 181 HIVDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYTCPHSAEILAAY 229


>gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens]
          Length = 241

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 7/177 (3%)

Query: 35  CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAP-GTHPPFITFNSEVKTDVNKIEE 93
           CPF++R  ++L  KG+   V  ++LK KP       P G  P       ++  +     E
Sbjct: 32  CPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGLVPVLENSQGQLIYESAITCE 91

Query: 94  FLEEVLCPPKYLKLSPKHPESNTAGMDIFAK----FSAYIKNSRPEANEALERGLLKTLQ 149
           +L+E     K L   P         +++F+K      ++I++   E    L+    K   
Sbjct: 92  YLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFT 151

Query: 150 KLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNE-MTLADC-NLLPKLHIVKVVAKK 204
           KL+E L +        NS+  I +    + +  E M L +C +  PKL +     K+
Sbjct: 152 KLEEVLTNKKTTFFGGNSISMIDYLIWPWFERLEAMKLNECVDHTPKLKLWMAAMKE 208


>gi|116534990 ankyrin-like protein 1 [Homo sapiens]
          Length = 1119

 Score = 35.4 bits (80), Expect = 0.048
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 11/77 (14%)

Query: 145 LKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPKLHI------- 197
           L+ L ++D+Y N+PL   +++N +E +KF   +   G    L + N++  LHI       
Sbjct: 88  LEVLHEMDDYGNTPLHCAVEKNQIESVKFLLSR---GANPNLRNFNMMAPLHIAVQGMNN 144

Query: 198 -VKVVAKKYRNFDIPKE 213
            V  V  ++R  D+  E
Sbjct: 145 EVMKVLLEHRTIDVNLE 161


>gi|22202624 glutathione transferase zeta 1 isoform 1 [Homo sapiens]
          Length = 216

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 22/167 (13%)

Query: 38  SQRLFMILWLKGVVFSVTTVDL-----KRKPADLQNLAPGTHPPFITFNSEVKTDVNKIE 92
           S R+ + L LKG+ +    ++L     ++   D Q L P    P +  +         I 
Sbjct: 17  SWRVRIALALKGIDYETVPINLIKDGGQQFSKDFQALNPMKQVPTLKIDGITIHQSLAII 76

Query: 93  EFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLD 152
           E+LEE+   P+ L   PK   S     D+ A     ++N             L  L+++ 
Sbjct: 77  EYLEEMRPTPRLLPQDPKKRASVRMISDLIAGGIQPLQN-------------LSVLKQVG 123

Query: 153 EYLNSPLPDE---IDENSMEDIKFSTRK-FLDGNEMTLADCNLLPKL 195
           E +             N++E I  ST   +  G+E+T+AD  L+P++
Sbjct: 124 EEMQLTWAQNAITCGFNALEQILQSTAGIYCVGDEVTMADLCLVPQV 170


>gi|108773799 ganglioside-induced differentiation-associated protein
           1 isoform b [Homo sapiens]
          Length = 290

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 127 AYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPD---EIDENSMEDIKFSTRKFLDGNE 183
           AYI   +   ++ L+   +K L+K+ + L   L     E+   + E  +   + +L G  
Sbjct: 116 AYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGES 175

Query: 184 MTLADCNLLPKLHIVKVVAKKYRNF 208
            TLAD +L   LH +K +    RN+
Sbjct: 176 FTLADVSLAVTLHRLKFLGFARRNW 200


>gi|108773797 ganglioside-induced differentiation-associated protein
           1 isoform a [Homo sapiens]
          Length = 358

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 127 AYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPD---EIDENSMEDIKFSTRKFLDGNE 183
           AYI   +   ++ L+   +K L+K+ + L   L     E+   + E  +   + +L G  
Sbjct: 184 AYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGES 243

Query: 184 MTLADCNLLPKLHIVKVVAKKYRNF 208
            TLAD +L   LH +K +    RN+
Sbjct: 244 FTLADVSLAVTLHRLKFLGFARRNW 268


>gi|50658082 centrosomal protein 70 kDa [Homo sapiens]
          Length = 597

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 145 LKTLQ-KLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPKLHIVKVVAK 203
           LKTL  +L  +LN    DE +   +ED+ F     L+  E    D N+     +  +V+ 
Sbjct: 413 LKTLSAELVPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSH 472

Query: 204 KYRNFDIPKEMTGIWRYLTNAYSR 227
             + FD+P  + G++  +   Y+R
Sbjct: 473 FQKLFDVP-SLNGVYPRMNEVYTR 495


>gi|119874201 furry-like [Homo sapiens]
          Length = 3013

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 27/130 (20%), Positives = 61/130 (46%), Gaps = 11/130 (8%)

Query: 106  KLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLP----- 160
            +L+  +PE   A   IF++ S  I+ + P   + +   LL  +  ++     PLP     
Sbjct: 1274 ELARAYPELTLA---IFSEISQRIQTAHPAGRQVMLHYLLPWMNNIELVDLKPLPTARRH 1330

Query: 161  DEIDENSMED--IKFSTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIW 218
            DE +++S++D  +  ++R++L G          +   +++ + A KY +     E+  +W
Sbjct: 1331 DEDEDDSLKDRELMVTSRRWLRGEGWGSPQATAMVLNNLMYMTA-KYGDELAWSEVENVW 1389

Query: 219  RYLTNAYSRD 228
              L + + ++
Sbjct: 1390 TTLADGWPKN 1399


>gi|103472003 forkhead box O4 [Homo sapiens]
          Length = 505

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query: 106 KLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALE 141
           +LSP  PES     +I A  S+Y     P  NE LE
Sbjct: 270 RLSPLRPESEVLAEEIPASVSSYAGGVPPTLNEGLE 305


>gi|38016131 glutathione S-transferase omega 2 [Homo sapiens]
          Length = 243

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFI 78
          CP+S R  ++L  K +   V  ++L+ KP       P  H P +
Sbjct: 32 CPYSHRTRLVLKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVL 75


>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
          Length = 983

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 11/129 (8%)

Query: 81  NSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEAL 140
           + ++K   +K EE ++EVL   K +KL    PES    MD ++ F   ++ +  E N  L
Sbjct: 485 SQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPES----MDNYSHFHE-LRVTEEEIN-VL 538

Query: 141 ERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRK--FLDGNEMTLADCNLLPKLHIV 198
           ++ L   L++ +   N     E++E  +E  K +  K    +  EM  + C+++  ++  
Sbjct: 539 KQDLQNALEESER--NKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIENMNKE 596

Query: 199 KV-VAKKYR 206
           K  + +KY+
Sbjct: 597 KAFLFEKYQ 605


>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
          Length = 972

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 11/129 (8%)

Query: 81  NSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEAL 140
           + ++K   +K EE ++EVL   K +KL    PES    MD ++ F   ++ +  E N  L
Sbjct: 474 SQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPES----MDNYSHFHE-LRVTEEEIN-VL 527

Query: 141 ERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRK--FLDGNEMTLADCNLLPKLHIV 198
           ++ L   L++ +   N     E++E  +E  K +  K    +  EM  + C+++  ++  
Sbjct: 528 KQDLQNALEESER--NKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIENMNKE 585

Query: 199 KV-VAKKYR 206
           K  + +KY+
Sbjct: 586 KAFLFEKYQ 594


>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
          Length = 951

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 11/129 (8%)

Query: 81  NSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEAL 140
           + ++K   +K EE ++EVL   K +KL    PES    MD ++ F   ++ +  E N  L
Sbjct: 453 SQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPES----MDNYSHFHE-LRVTEEEIN-VL 506

Query: 141 ERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRK--FLDGNEMTLADCNLLPKLHIV 198
           ++ L   L++ +   N     E++E  +E  K +  K    +  EM  + C+++  ++  
Sbjct: 507 KQDLQNALEESER--NKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIENMNKE 564

Query: 199 KV-VAKKYR 206
           K  + +KY+
Sbjct: 565 KAFLFEKYQ 573


>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
          Length = 980

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 11/129 (8%)

Query: 81  NSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEAL 140
           + ++K   +K EE ++EVL   K +KL    PES    MD ++ F   ++ +  E N  L
Sbjct: 482 SQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPES----MDNYSHFHE-LRVTEEEIN-VL 535

Query: 141 ERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRK--FLDGNEMTLADCNLLPKLHIV 198
           ++ L   L++ +   N     E++E  +E  K +  K    +  EM  + C+++  ++  
Sbjct: 536 KQDLQNALEESER--NKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIENMNKE 593

Query: 199 KV-VAKKYR 206
           K  + +KY+
Sbjct: 594 KAFLFEKYQ 602


>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
          Length = 980

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 11/129 (8%)

Query: 81  NSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEAL 140
           + ++K   +K EE ++EVL   K +KL    PES    MD ++ F   ++ +  E N  L
Sbjct: 482 SQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPES----MDNYSHFHE-LRVTEEEIN-VL 535

Query: 141 ERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRK--FLDGNEMTLADCNLLPKLHIV 198
           ++ L   L++ +   N     E++E  +E  K +  K    +  EM  + C+++  ++  
Sbjct: 536 KQDLQNALEESER--NKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIENMNKE 593

Query: 199 KV-VAKKYR 206
           K  + +KY+
Sbjct: 594 KAFLFEKYQ 602


>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
          Length = 980

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 11/129 (8%)

Query: 81  NSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEAL 140
           + ++K   +K EE ++EVL   K +KL    PES    MD ++ F   ++ +  E N  L
Sbjct: 482 SQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPES----MDNYSHFHE-LRVTEEEIN-VL 535

Query: 141 ERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRK--FLDGNEMTLADCNLLPKLHIV 198
           ++ L   L++ +   N     E++E  +E  K +  K    +  EM  + C+++  ++  
Sbjct: 536 KQDLQNALEESER--NKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIENMNKE 593

Query: 199 KV-VAKKYR 206
           K  + +KY+
Sbjct: 594 KAFLFEKYQ 602


>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
            transmembrane signal), 1 [Homo sapiens]
          Length = 3259

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 82   SEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALE 141
            +E +T   ++ E   +++   + L +  K  +  TA +  F +  + ++NSR  ANE L+
Sbjct: 2696 NETETAEERVAELARDLVEMEQKLLMVTKENKGLTAQIQSFGRSMSSLQNSRDHANEELD 2755

Query: 142  R------GLLKTLQKLDE 153
                     LK L +L E
Sbjct: 2756 ELKRKYDASLKELAQLKE 2773


>gi|40254464 leptin receptor isoform 1 [Homo sapiens]
          Length = 1165

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 122  FAKFSAYIKNSRPEANEALERGLL-KTLQKLDEYLNSPLPDEIDENSME 169
            F K++  I NS+P +    E+GL+  ++ K     NSPL D    +S E
Sbjct: 983  FVKYATLISNSKP-SETGEEQGLINSSVTKCFSSKNSPLKDSFSNSSWE 1030


>gi|33354279 hypothetical protein LOC55425 [Homo sapiens]
          Length = 340

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 133 RPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDI 171
           RP    AL  G +K+ QK D+  + P   E D +  EDI
Sbjct: 108 RPIIGPALPPGFIKSTQKSDKGRDDPGQQETDSSEDEDI 146


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.135    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,853,877
Number of Sequences: 37866
Number of extensions: 427069
Number of successful extensions: 1000
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 984
Number of HSP's gapped (non-prelim): 27
length of query: 253
length of database: 18,247,518
effective HSP length: 100
effective length of query: 153
effective length of database: 14,460,918
effective search space: 2212520454
effective search space used: 2212520454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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