Search of human proteins with 70980552

Search of human proteins with 70980552

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|70980552 secretoglobin-like [Homo sapiens]
         (96 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|70980552 secretoglobin-like [Homo sapiens]                         189   5e-49
gi|169213860 PREDICTED: hypothetical protein [Homo sapiens]            38   0.002
gi|169214297 PREDICTED: hypothetical protein [Homo sapiens]            38   0.002
gi|169213259 PREDICTED: hypothetical protein [Homo sapiens]            38   0.002
gi|5729909 lipophilin B precursor [Homo sapiens]                       33   0.049
gi|21281677 WD repeat domain 36 [Homo sapiens]                         27   3.5  
gi|13124891 polypeptide N-acetylgalactosaminyltransferase 1 [Hom...    27   3.5  
gi|14195616 protocadherin beta 9 precursor [Homo sapiens]              27   3.5  
gi|239048909 checkpoint with forkhead and ring finger domains is...    27   4.6  
gi|239048905 checkpoint with forkhead and ring finger domains is...    27   4.6  
gi|239048862 checkpoint with forkhead and ring finger domains is...    27   4.6  
gi|239048792 checkpoint with forkhead and ring finger domains is...    27   4.6  
gi|239048907 checkpoint with forkhead and ring finger domains is...    27   4.6  
gi|27597061 ubiquitin protein ligase E3 component n-recognin 2 [...    27   4.6  
gi|187608312 cyclin N-terminal domain containing 1 [Homo sapiens]      26   6.0  

>gi|70980552 secretoglobin-like [Homo sapiens]
          Length = 96

 Score =  189 bits (479), Expect = 5e-49
 Identities = 96/96 (100%), Positives = 96/96 (100%)

Query: 1  MRVTSATCALLLALICSVQLGDACLDIDKLLANVVFDVSQDLLKEELARYNPSPLTEESF 60
          MRVTSATCALLLALICSVQLGDACLDIDKLLANVVFDVSQDLLKEELARYNPSPLTEESF
Sbjct: 1  MRVTSATCALLLALICSVQLGDACLDIDKLLANVVFDVSQDLLKEELARYNPSPLTEESF 60

Query: 61 LNVQQCFANVSVTERFAHSVVIKKILQSNDCIEAAF 96
          LNVQQCFANVSVTERFAHSVVIKKILQSNDCIEAAF
Sbjct: 61 LNVQQCFANVSVTERFAHSVVIKKILQSNDCIEAAF 96


>gi|169213860 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 59

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 17/22 (77%), Positives = 19/22 (86%)

Query: 1  MRVTSATCALLLALICSVQLGD 22
          MR+T   CALLLALICSVQLG+
Sbjct: 1  MRMTPTACALLLALICSVQLGE 22


>gi|169214297 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 59

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 17/22 (77%), Positives = 19/22 (86%)

Query: 1  MRVTSATCALLLALICSVQLGD 22
          MR+T   CALLLALICSVQLG+
Sbjct: 1  MRMTPTACALLLALICSVQLGE 22


>gi|169213259 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 59

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 17/22 (77%), Positives = 19/22 (86%)

Query: 1  MRVTSATCALLLALICSVQLGD 22
          MR+T   CALLLALICSVQLG+
Sbjct: 1  MRMTPTACALLLALICSVQLGE 22


>gi|5729909 lipophilin B precursor [Homo sapiens]
          Length = 90

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 6  ATCALL--LALICSVQLGDACLDIDKLLANVVFDVSQDLLKEELARYNPSPLTEESFLNV 63
          + C LL  LAL C     + C  +   L +  F +S+ L K  LA+++  P    + L V
Sbjct: 4  SVCLLLVTLALCCYQANAEFCPALVSELLDFFF-ISEPLFKLSLAKFDAPPEAVAAKLGV 62

Query: 64 QQCFANVSVTERFAHSVVIKKILQ 87
          ++C   +S+ +R   + V+ KIL+
Sbjct: 63 KRCTDQMSLQKRSLIAEVLVKILK 86


>gi|21281677 WD repeat domain 36 [Homo sapiens]
          Length = 951

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 19  QLGDACLDIDKLLANVVFDVSQDLLKEELARYNPSPLTEESFLNVQQCFANVSVTERF 76
           Q  D CL +++ L N  +D + +LLKE      PS +  E       C  ++ V + F
Sbjct: 823 QKSDFCLKLEEGLVNNKYDTALNLLKES----GPSGIETELRSLSPDCGGSIEVMQSF 876


>gi|13124891 polypeptide N-acetylgalactosaminyltransferase 1 [Homo
           sapiens]
          Length = 559

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 18  VQLGDACLDIDKLLANVVFDVSQDLLKEELARYNPSPLTEESFLNVQQC 66
           ++  D CLD+ KL   V       L   +L  Y+P  LT +  +N  QC
Sbjct: 476 IRTDDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQ-HVNSNQC 523


>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
          Length = 797

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 14/88 (15%)

Query: 13  ALICSVQLGDACLDIDKLLANVVFDVSQDLLKEELARYNPSPLTEESFLN-------VQQ 65
           +LI  V  GDA   ++  ++   FD S+D+    L  +  +P + E FL        V  
Sbjct: 259 SLIVKVSAGDADSGVNAEVSYSFFDASEDI----LTTFQINPFSGEIFLRELLDYELVNS 314

Query: 66  CFANVSVTE---RFAHSVVIKKILQSND 90
              N+   +     A   V+ K+L SND
Sbjct: 315 YKINIQAMDGGGLSARCTVLIKVLDSND 342


>gi|239048909 checkpoint with forkhead and ring finger domains
           isoform 5 [Homo sapiens]
          Length = 572

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 4   TSATCALLLALICSVQLGDACLDIDKLLANVVFDVSQDLLKEELA 48
           T   C   LA  C + LGD CL  D +L N  ++   D+LK  LA
Sbjct: 433 TRTGCYGCLAPFCELNLGDKCL--DGVLNNNSYE--SDILKNYLA 473


>gi|239048905 checkpoint with forkhead and ring finger domains
           isoform 3 [Homo sapiens]
          Length = 652

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 4   TSATCALLLALICSVQLGDACLDIDKLLANVVFDVSQDLLKEELA 48
           T   C   LA  C + LGD CL  D +L N  ++   D+LK  LA
Sbjct: 513 TRTGCYGCLAPFCELNLGDKCL--DGVLNNNSYE--SDILKNYLA 553


>gi|239048862 checkpoint with forkhead and ring finger domains
           isoform 2 [Homo sapiens]
          Length = 663

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 4   TSATCALLLALICSVQLGDACLDIDKLLANVVFDVSQDLLKEELA 48
           T   C   LA  C + LGD CL  D +L N  ++   D+LK  LA
Sbjct: 524 TRTGCYGCLAPFCELNLGDKCL--DGVLNNNSYE--SDILKNYLA 564


>gi|239048792 checkpoint with forkhead and ring finger domains
           isoform 1 [Homo sapiens]
          Length = 664

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 4   TSATCALLLALICSVQLGDACLDIDKLLANVVFDVSQDLLKEELA 48
           T   C   LA  C + LGD CL  D +L N  ++   D+LK  LA
Sbjct: 525 TRTGCYGCLAPFCELNLGDKCL--DGVLNNNSYE--SDILKNYLA 565


>gi|239048907 checkpoint with forkhead and ring finger domains
           isoform 4 [Homo sapiens]
          Length = 623

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 4   TSATCALLLALICSVQLGDACLDIDKLLANVVFDVSQDLLKEELA 48
           T   C   LA  C + LGD CL  D +L N  ++   D+LK  LA
Sbjct: 484 TRTGCYGCLAPFCELNLGDKCL--DGVLNNNSYE--SDILKNYLA 524


>gi|27597061 ubiquitin protein ligase E3 component n-recognin 2 [Homo
            sapiens]
          Length = 1755

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 47   LARYNPSPLTEESFLNVQQCFANVSVTERFAHS 79
            L R NP  L +E F  +Q+ +   SVTE   H+
Sbjct: 1708 LRRGNPLHLCKERFKKIQKLWHQHSVTEEIGHA 1740


>gi|187608312 cyclin N-terminal domain containing 1 [Homo sapiens]
          Length = 330

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 5/78 (6%)

Query: 14  LICSVQLGDACLDIDKLLANVVFDVSQDLLKEELARYNPSPLTEESFLNVQQCFANVSVT 73
           L+ +++L   CL +  L+  +   + + LL+  +    PS L  E F +V++ F  ++V 
Sbjct: 199 LVPAMRLHATCLTLLDLVYLLHEPIYESLLRASIENSTPSQLQGEKFTSVKEDFMLLAV- 257

Query: 74  ERFAHSVVIKKILQSNDC 91
                 +     +Q+++C
Sbjct: 258 ----GIIAASAFIQNHEC 271


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.134    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,049,240
Number of Sequences: 37866
Number of extensions: 105722
Number of successful extensions: 317
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 309
Number of HSP's gapped (non-prelim): 16
length of query: 96
length of database: 18,247,518
effective HSP length: 67
effective length of query: 29
effective length of database: 15,710,496
effective search space: 455604384
effective search space used: 455604384
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.