PUS1 35012

Name: PUS1	Sequence: fasta or formatted (399aa)		NCBI GI: 70166599
Description: pseudouridine synthase 1 isoform 2		Referenced in: tRNA Enzymes
Other entries for this name: alt mRNA [399aa] pseudouridine synthase 1 isoform 2 alt prot [427aa] pseudouridine synthase 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 30 2 C cysteine 2.3 9 1 D aspartate 5.5 22 2 E glutamate 7.8 31 2 F phenylalanine 3.5 14 1 G glycine 9.5 38 2 H histidine 3.3 13 1 I isoleucine 4.0 16 2 K lysine 6.5 26 2 L leucine 7.5 30 2 M methionine 2.5 10 2 N asparagine 3.0 12 1 P proline 5.3 21 3 Q glutamine 3.8 15 2 R arginine 7.0 28 2 S serine 6.3 25 2 T threonine 4.3 17 1 V valine 6.5 26 2 W tryptophan 1.3 5 1 Y tyrosine 2.8 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 pseudouridine synthase 1 isoform 2 PUS1 1.000 pseudouridine synthase 1 isoform 2 PUS1 1.000 pseudouridine synthase 1 isoform 1 PUS3 0.066 pseudouridylate synthase 3 PUSL1 0.043 pseudouridylate synthase-like 1 DNAH1 0.011 dynein, axonemal, heavy chain 1 FAM171A2 0.010 family with sequence similarity 171, member A2 [Hom... LZTS1 0.009 leucine zipper, putative tumor suppressor 1 IER5 0.009 immediate early response 5 LOC730236 0.008 PREDICTED: hypothetical protein LOC100132891 0.008 PREDICTED: hypothetical protein LOC730236 0.008 PREDICTED: hypothetical protein LOC100132891 0.008 PREDICTED: hypothetical protein LOC730236 0.008 PREDICTED: hypothetical protein LOC100132891 0.008 PREDICTED: hypothetical protein ATOH1 0.006 atonal homolog 1 SEMA6D 0.006 semaphorin 6D isoform 1 precursor SEMA6D 0.006 semaphorin 6D isoform 4 precursor SEMA6D 0.006 semaphorin 6D isoform 3 precursor SEMA6D 0.006 semaphorin 6D isoform 2 precursor NKX1-2 0.005 PREDICTED: NK1 homeobox 2 NKX1-2 0.005 PREDICTED: NK1 homeobox 2 NKX1-2 0.005 PREDICTED: NK1 homeobox 2 SCN2A 0.005 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.005 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.005 sodium channel, voltage-gated, type II, alpha isofor... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.