BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|68160945 sterol-C5-desaturase [Homo sapiens] (299 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|68160945 sterol-C5-desaturase [Homo sapiens] 635 0.0 gi|68160941 sterol-C5-desaturase [Homo sapiens] 635 0.0 gi|62865628 sterol-C4-methyl oxidase-like isoform 2 [Homo sapiens] 81 1e-15 gi|5803157 sterol-C4-methyl oxidase-like isoform 1 [Homo sapiens] 81 1e-15 gi|146198575 hypothetical protein LOC10826 isoform 2 [Homo sapiens] 63 3e-10 gi|4502499 cholesterol 25-hydroxylase [Homo sapiens] 51 1e-06 gi|51972212 transmembrane protein 195 [Homo sapiens] 44 2e-04 gi|40789306 zinc finger protein 365 isoform C [Homo sapiens] 30 3.4 gi|55743086 alpha-1,3-mannosyltransferase ALG3 isoform d [Homo s... 28 7.5 gi|5031953 alpha-1,3-mannosyltransferase ALG3 isoform a [Homo sa... 28 7.5 gi|52317096 olfactory receptor, family 4, subfamily X, member 1 ... 28 7.5 gi|222446642 solute carrier family 36, member 3 isoform 1 [Homo ... 28 9.8 gi|222446640 solute carrier family 36, member 3 isoform 2 [Homo ... 28 9.8 gi|44888835 ATPase, class I, type 8B, member 3 [Homo sapiens] 28 9.8 gi|125660451 MAS-related GPR, member X1 [Homo sapiens] 28 9.8 >gi|68160945 sterol-C5-desaturase [Homo sapiens] Length = 299 Score = 635 bits (1639), Expect = 0.0 Identities = 299/299 (100%), Positives = 299/299 (100%) Query: 1 MDLVLRVADYYFFTPYVYPATWPEDDIFRQAISLLIVTNVGAYILYFFCATLSYYFVFDH 60 MDLVLRVADYYFFTPYVYPATWPEDDIFRQAISLLIVTNVGAYILYFFCATLSYYFVFDH Sbjct: 1 MDLVLRVADYYFFTPYVYPATWPEDDIFRQAISLLIVTNVGAYILYFFCATLSYYFVFDH 60 Query: 61 ALMKHPQFLKNQVRREIKFTVQALPWISILTVALFLLEIRGYSKLHDDLGEFPYGLFELV 120 ALMKHPQFLKNQVRREIKFTVQALPWISILTVALFLLEIRGYSKLHDDLGEFPYGLFELV Sbjct: 61 ALMKHPQFLKNQVRREIKFTVQALPWISILTVALFLLEIRGYSKLHDDLGEFPYGLFELV 120 Query: 121 VSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPHHIWKIPTPFASHAFHPIDGFLQSLPY 180 VSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPHHIWKIPTPFASHAFHPIDGFLQSLPY Sbjct: 121 VSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPHHIWKIPTPFASHAFHPIDGFLQSLPY 180 Query: 181 HIYPFIFPLHKVVYLSLYILVNIWTISIHDGDFRVPQILQPFINGSAHHTDHHMFFDYNY 240 HIYPFIFPLHKVVYLSLYILVNIWTISIHDGDFRVPQILQPFINGSAHHTDHHMFFDYNY Sbjct: 181 HIYPFIFPLHKVVYLSLYILVNIWTISIHDGDFRVPQILQPFINGSAHHTDHHMFFDYNY 240 Query: 241 GQYFTLWDRIGGSFKNPSSFEGKGPLSYVKEMTEGKRSSHSGNGCKNEKLFNGEFTKTE 299 GQYFTLWDRIGGSFKNPSSFEGKGPLSYVKEMTEGKRSSHSGNGCKNEKLFNGEFTKTE Sbjct: 241 GQYFTLWDRIGGSFKNPSSFEGKGPLSYVKEMTEGKRSSHSGNGCKNEKLFNGEFTKTE 299 >gi|68160941 sterol-C5-desaturase [Homo sapiens] Length = 299 Score = 635 bits (1639), Expect = 0.0 Identities = 299/299 (100%), Positives = 299/299 (100%) Query: 1 MDLVLRVADYYFFTPYVYPATWPEDDIFRQAISLLIVTNVGAYILYFFCATLSYYFVFDH 60 MDLVLRVADYYFFTPYVYPATWPEDDIFRQAISLLIVTNVGAYILYFFCATLSYYFVFDH Sbjct: 1 MDLVLRVADYYFFTPYVYPATWPEDDIFRQAISLLIVTNVGAYILYFFCATLSYYFVFDH 60 Query: 61 ALMKHPQFLKNQVRREIKFTVQALPWISILTVALFLLEIRGYSKLHDDLGEFPYGLFELV 120 ALMKHPQFLKNQVRREIKFTVQALPWISILTVALFLLEIRGYSKLHDDLGEFPYGLFELV Sbjct: 61 ALMKHPQFLKNQVRREIKFTVQALPWISILTVALFLLEIRGYSKLHDDLGEFPYGLFELV 120 Query: 121 VSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPHHIWKIPTPFASHAFHPIDGFLQSLPY 180 VSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPHHIWKIPTPFASHAFHPIDGFLQSLPY Sbjct: 121 VSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPHHIWKIPTPFASHAFHPIDGFLQSLPY 180 Query: 181 HIYPFIFPLHKVVYLSLYILVNIWTISIHDGDFRVPQILQPFINGSAHHTDHHMFFDYNY 240 HIYPFIFPLHKVVYLSLYILVNIWTISIHDGDFRVPQILQPFINGSAHHTDHHMFFDYNY Sbjct: 181 HIYPFIFPLHKVVYLSLYILVNIWTISIHDGDFRVPQILQPFINGSAHHTDHHMFFDYNY 240 Query: 241 GQYFTLWDRIGGSFKNPSSFEGKGPLSYVKEMTEGKRSSHSGNGCKNEKLFNGEFTKTE 299 GQYFTLWDRIGGSFKNPSSFEGKGPLSYVKEMTEGKRSSHSGNGCKNEKLFNGEFTKTE Sbjct: 241 GQYFTLWDRIGGSFKNPSSFEGKGPLSYVKEMTEGKRSSHSGNGCKNEKLFNGEFTKTE 299 >gi|62865628 sterol-C4-methyl oxidase-like isoform 2 [Homo sapiens] Length = 162 Score = 81.3 bits (199), Expect = 1e-15 Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 2/135 (1%) Query: 131 DMFIYWIHRGLHHRLVYKRLHKPHHIWKIPTPFASHAFHPIDGFLQSLPYHIYPFIFPLH 190 D + Y++HR LHH+ +YK +HK HH ++ P + HP++ + + I + H Sbjct: 19 DTWHYFLHRLLHHKRIYKYIHKVHHEFQAPFGMEAEYAHPLETLILGTGFFIGIVLLCDH 78 Query: 191 KVVYLSLYILVNIWTISIHDG-DFRV-PQILQPFINGSAHHTDHHMFFDYNYGQYFTLWD 248 ++ + + + TI +H G D + P L PF GS HH HHM F NY FT WD Sbjct: 79 VILLWAWVTIRLLETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFIGNYASTFTWWD 138 Query: 249 RIGGSFKNPSSFEGK 263 RI G+ +++ K Sbjct: 139 RIFGTDSQYNAYNEK 153 >gi|5803157 sterol-C4-methyl oxidase-like isoform 1 [Homo sapiens] Length = 293 Score = 81.3 bits (199), Expect = 1e-15 Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 2/135 (1%) Query: 131 DMFIYWIHRGLHHRLVYKRLHKPHHIWKIPTPFASHAFHPIDGFLQSLPYHIYPFIFPLH 190 D + Y++HR LHH+ +YK +HK HH ++ P + HP++ + + I + H Sbjct: 150 DTWHYFLHRLLHHKRIYKYIHKVHHEFQAPFGMEAEYAHPLETLILGTGFFIGIVLLCDH 209 Query: 191 KVVYLSLYILVNIWTISIHDG-DFRV-PQILQPFINGSAHHTDHHMFFDYNYGQYFTLWD 248 ++ + + + TI +H G D + P L PF GS HH HHM F NY FT WD Sbjct: 210 VILLWAWVTIRLLETIDVHSGYDIPLNPLNLIPFYAGSRHHDFHHMNFIGNYASTFTWWD 269 Query: 249 RIGGSFKNPSSFEGK 263 RI G+ +++ K Sbjct: 270 RIFGTDSQYNAYNEK 284 >gi|146198575 hypothetical protein LOC10826 isoform 2 [Homo sapiens] Length = 333 Score = 63.2 bits (152), Expect = 3e-10 Identities = 47/158 (29%), Positives = 68/158 (43%), Gaps = 15/158 (9%) Query: 108 DLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPHHIWKIPTPFASHA 167 +L F + L EL + F ++ Y+ HR LHH YK++HK HH W P S Sbjct: 164 ELPTFHWFLLELAI----FTLIEEVLFYYSHRLLHHPTFYKKIHKKHHEWTAPIGVISLY 219 Query: 168 FHPIDGFLQS-LPYHIYPFIFPLHKVVYLSLYILVNIWTISIHDGDFRVPQILQPFINGS 226 HPI+ + + LP + P + H + L I T H G PF+ Sbjct: 220 AHPIEHAVSNMLPVIVGPLVMGSHLSSITMWFSLALIITTISHCG------YHLPFLPSP 273 Query: 227 AHHTDHHMFFDYNYGQYFTLWDRIGGS---FKNPSSFE 261 H HH+ F+ YG L D + G+ FK ++E Sbjct: 274 EFHDYHHLKFNQCYGVLGVL-DHLHGTDTMFKQTKAYE 310 >gi|4502499 cholesterol 25-hydroxylase [Homo sapiens] Length = 272 Score = 51.2 bits (121), Expect = 1e-06 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 13/140 (9%) Query: 127 LFFTDMFIYWIHRGLHHRL--VYKRLHKPHHIWKIPTPFASHAFHPIDGFLQSLPYHIYP 184 LF + F++ + LHH++ +Y+ HK HH A+ + F + Sbjct: 134 LFDMEFFVWHL---LHHKVPWLYRTFHKVHHQNSSSFALATQYMSVWELFSLGFFDMMNV 190 Query: 185 FIFPLHKVVYLSLYILVNIW-TISIHDGDFRVP---QILQPF--INGSAHHTDHHMFFDY 238 + H + L+ ++ VNIW ++ H G + P L PF G HH HH F+ Sbjct: 191 TLLGCHPLTTLTFHV-VNIWLSVEDHSG-YNFPWSTHRLVPFGWYGGVVHHDLHHSHFNC 248 Query: 239 NYGQYFTLWDRIGGSFKNPS 258 N+ YFT WD+I G+ + S Sbjct: 249 NFAPYFTHWDKILGTLRTAS 268 >gi|51972212 transmembrane protein 195 [Homo sapiens] Length = 445 Score = 43.5 bits (101), Expect = 2e-04 Identities = 34/132 (25%), Positives = 50/132 (37%), Gaps = 12/132 (9%) Query: 131 DMFIYWIHRGLHHRLVYKRLHKPHHI---WKIPTPFASHAFHPIDGFLQSLPYHIYPFIF 187 D YW HR H + H+ HH + + T ++ P + FI Sbjct: 125 DFGYYWFHRMAHEVNIMWAGHQTHHSSEDYNLSTALRQSVLQIYTSWIFYSPLAL--FIP 182 Query: 188 PLHKVVYLSLYILVNIWTISIHDGDFRVPQILQPFINGSAHHTDHH----MFFDYNYGQY 243 P V+L +L W IH L+ +N +HH HH D NY Sbjct: 183 PSVYAVHLQFNLLYQFW---IHTEVINNLGPLELILNTPSHHRVHHGRNRYCIDKNYAGV 239 Query: 244 FTLWDRIGGSFK 255 +WD+I G+F+ Sbjct: 240 LIIWDKIFGTFE 251 >gi|40789306 zinc finger protein 365 isoform C [Homo sapiens] Length = 462 Score = 29.6 bits (65), Expect = 3.4 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%) Query: 166 HAFHPIDGFLQSLPYHIYPFIF--PLHKVVYLS-LYILVNIWTISIHDGDFRVPQILQPF 222 H H + G S H F+ P+ ++ S L+IL N WT S F +L PF Sbjct: 331 HINHHLSGLKDS---HCLVFLQAPPVPWIILASFLWILGNPWTSSTATAGFSQIWVLFPF 387 Query: 223 INGSAHHTD 231 G+ HH + Sbjct: 388 CGGTFHHNE 396 >gi|55743086 alpha-1,3-mannosyltransferase ALG3 isoform d [Homo sapiens] Length = 390 Score = 28.5 bits (62), Expect = 7.5 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 123 IISFLFFTDMFIYWIHRGLHHRLVYKRLHK-PHHIWKIPTPFASHAFHPIDGFLQSLPYH 181 I+S LF ++ R LH++ H P+ +W +P + +H + L L ++ Sbjct: 290 IVSTLFTSNFIGICFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWN 349 Query: 182 IYP-------FIFPLHKVVYLSLYI 199 YP + H V+ L L++ Sbjct: 350 TYPSTSCSSAALHICHAVILLQLWL 374 >gi|5031953 alpha-1,3-mannosyltransferase ALG3 isoform a [Homo sapiens] Length = 438 Score = 28.5 bits (62), Expect = 7.5 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 123 IISFLFFTDMFIYWIHRGLHHRLVYKRLHK-PHHIWKIPTPFASHAFHPIDGFLQSLPYH 181 I+S LF ++ R LH++ H P+ +W +P + +H + L L ++ Sbjct: 338 IVSTLFTSNFIGICFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWN 397 Query: 182 IYP-------FIFPLHKVVYLSLYI 199 YP + H V+ L L++ Sbjct: 398 TYPSTSCSSAALHICHAVILLQLWL 422 >gi|52317096 olfactory receptor, family 4, subfamily X, member 1 [Homo sapiens] Length = 305 Score = 28.5 bits (62), Expect = 7.5 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 7 VADYYFFTPYVYPATWPEDDIFRQAISLLIVTNVGAYILYFFCATLSYYFVFDHALMKH 65 + D+YF + D F ISLLI+TN G+ + F ++ Y + H L H Sbjct: 171 IMDHYFCDVHPVLELACADTFF---ISLLIITNGGSISVVSFFVLMASYLIILHFLRSH 226 >gi|222446642 solute carrier family 36, member 3 isoform 1 [Homo sapiens] Length = 511 Score = 28.1 bits (61), Expect = 9.8 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Query: 33 SLLIVTNVGAYILYFFCATLSYYFVFDHALMKHPQFLKNQVRREIKFTVQALPWISILTV 92 +L ++ N ++L+F A F F+ M P LKNQ++ +F+ +SI+ + Sbjct: 284 NLPLMANWKTFLLFFGTAI----FTFEGVGMVLP--LKNQMKHPQQFSFVLYLGMSIVII 337 Query: 93 ALFLLEIRGYSKLHDD 108 LL GY K D Sbjct: 338 LYILLGTLGYMKFGSD 353 >gi|222446640 solute carrier family 36, member 3 isoform 2 [Homo sapiens] Length = 470 Score = 28.1 bits (61), Expect = 9.8 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Query: 33 SLLIVTNVGAYILYFFCATLSYYFVFDHALMKHPQFLKNQVRREIKFTVQALPWISILTV 92 +L ++ N ++L+F A F F+ M P LKNQ++ +F+ +SI+ + Sbjct: 243 NLPLMANWKTFLLFFGTAI----FTFEGVGMVLP--LKNQMKHPQQFSFVLYLGMSIVII 296 Query: 93 ALFLLEIRGYSKLHDD 108 LL GY K D Sbjct: 297 LYILLGTLGYMKFGSD 312 >gi|44888835 ATPase, class I, type 8B, member 3 [Homo sapiens] Length = 1300 Score = 28.1 bits (61), Expect = 9.8 Identities = 13/30 (43%), Positives = 17/30 (56%) Query: 81 VQALPWISILTVALFLLEIRGYSKLHDDLG 110 + LPW S+ T + LL IR L DD+G Sbjct: 177 ISTLPWFSLSTPMVCLLFIRATRDLVDDMG 206 >gi|125660451 MAS-related GPR, member X1 [Homo sapiens] Length = 322 Score = 28.1 bits (61), Expect = 9.8 Identities = 21/100 (21%), Positives = 42/100 (42%), Gaps = 14/100 (14%) Query: 114 YGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPHHIWKIPTPFASHAFHPIDG 173 + ++ L ++ FLF + IY + + PH I KI P ++ Sbjct: 61 FSIYILNLAAADFLFLSGRLIYSL---------LSFISIPHTISKILYPVMMFSYFAGLS 111 Query: 174 FLQSLPYH-----IYPFIFPLHKVVYLSLYILVNIWTISI 208 FL ++ ++P + H+ +LS + V +W +S+ Sbjct: 112 FLSAVSTERCLSVLWPIWYRCHRPTHLSAVVCVLLWALSL 151 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.329 0.146 0.480 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,663,394 Number of Sequences: 37866 Number of extensions: 517749 Number of successful extensions: 1238 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 1225 Number of HSP's gapped (non-prelim): 16 length of query: 299 length of database: 18,247,518 effective HSP length: 102 effective length of query: 197 effective length of database: 14,385,186 effective search space: 2833881642 effective search space used: 2833881642 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.