Guide to the Human Genome
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Name: SC4MOL Sequence: fasta or formatted (162aa) NCBI GI: 62865628
Description:

sterol-C4-methyl oxidase-like isoform 2

Referenced in:

Cholesterol Biosynthesis

Other entries for this name:
alt prot [293aa] sterol-C4-methyl oxidase-like isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6          9           1
 C cysteine            1.9          3           1
 D aspartate           4.3          7           1
 E glutamate           5.6          9           1
 F phenylalanine       8.0         13           2
 G glycine             5.6          9           1
 H histidine           8.6         14           2
 I isoleucine          8.0         13           1
 K lysine              4.9          8           2
 L leucine            10.5         17           2
 M methionine          1.9          3           1
 N asparagine          3.7          6           1
 P proline             3.7          6           1
 Q glutamine           1.2          2           1
 R arginine            4.9          8           1
 S serine              2.5          4           1
 T threonine           5.6          9           1
 V valine              3.7          6           1
 W tryptophan          3.7          6           2
 Y tyrosine            6.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sterol-C4-methyl oxidase-like isoform 2 
SC4MOL                1.000   sterol-C4-methyl oxidase-like isoform 1 
CH25H                 0.201   cholesterol 25-hydroxylase 
C5orf4                0.189   hypothetical protein LOC10826 isoform 2 
SC5DL                 0.168   sterol-C5-desaturase 
SC5DL                 0.168   sterol-C5-desaturase 
TMEM195               0.045   transmembrane protein 195 
FA2H                  0.012   fatty acid 2-hydroxylase 
ADCY10                0.009   adenylate cyclase 10 
ONECUT2               0.009   one cut domain, family member 2 
ONECUT1               0.006   one cut homeobox 1 
BIRC2                 0.006   baculoviral IAP repeat-containing protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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