Guide to the Human Genome
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Search of human proteins with 60498969

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|60498969 speedy homolog A isoform 1 [Homo sapiens]
         (313 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|217416376 speedy homolog A isoform 1 [Homo sapiens]                659   0.0  
gi|60498969 speedy homolog A isoform 1 [Homo sapiens]                 659   0.0  
gi|56961678 speedy homolog A isoform 2 [Homo sapiens]                 597   e-171
gi|56912202 speedy C [Homo sapiens]                                   184   1e-46
gi|189303549 speedy homolog E4 [Homo sapiens]                         102   4e-22
gi|239743254 PREDICTED: hypothetical protein XP_002342780 [Homo ...    94   2e-19
gi|239508929 PREDICTED: similar to Putative WBSCR19-like protein...    94   2e-19
gi|118601064 speedy homolog E3 [Homo sapiens]                          89   5e-18
gi|30795188 Williams Beuren syndrome chromosome region 19 protei...    87   2e-17
gi|194595492 speedy homolog E5 [Homo sapiens]                          86   3e-17
gi|239743228 PREDICTED: WBSCR19-like protein 8-like isoform 2 [H...    82   8e-16
gi|239508903 PREDICTED: WBSCR19-like protein 8-like [Homo sapiens]     82   8e-16
gi|226246595 speedy homolog E6 [Homo sapiens]                          80   2e-15
gi|239743297 PREDICTED: speedy homolog E6 [Homo sapiens]               80   2e-15
gi|169170099 PREDICTED: similar to speedy homolog A [Homo sapiens]     80   2e-15
gi|239508980 PREDICTED: speedy homolog E6 (Xenopus laevis) [Homo...    80   2e-15
gi|239508919 PREDICTED: similar to speedy homolog A [Homo sapiens]     80   2e-15
gi|71979927 speedy homolog E2 [Homo sapiens]                           80   2e-15
gi|239743311 PREDICTED: similar to speedy homolog A isoform 1 [H...    80   3e-15
gi|239508994 PREDICTED: similar to speedy homolog A isoform 7 [H...    80   3e-15
gi|4503759 flavin containing monooxygenase 4 [Homo sapiens]            31   1.2  
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa...    29   6.2  

>gi|217416376 speedy homolog A isoform 1 [Homo sapiens]
          Length = 313

 Score =  659 bits (1701), Expect = 0.0
 Identities = 313/313 (100%), Positives = 313/313 (100%)

Query: 1   MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK 60
           MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK
Sbjct: 1   MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK 60

Query: 61  GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR 120
           GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR
Sbjct: 61  GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR 120

Query: 121 INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR 180
           INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR
Sbjct: 121 INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR 180

Query: 181 CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL 240
           CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL
Sbjct: 181 CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL 240

Query: 241 GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEVVNDHQSNKGKKTNFLK 300
           GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEVVNDHQSNKGKKTNFLK
Sbjct: 241 GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEVVNDHQSNKGKKTNFLK 300

Query: 301 KDKSMEWFTGSEE 313
           KDKSMEWFTGSEE
Sbjct: 301 KDKSMEWFTGSEE 313


>gi|60498969 speedy homolog A isoform 1 [Homo sapiens]
          Length = 313

 Score =  659 bits (1701), Expect = 0.0
 Identities = 313/313 (100%), Positives = 313/313 (100%)

Query: 1   MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK 60
           MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK
Sbjct: 1   MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK 60

Query: 61  GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR 120
           GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR
Sbjct: 61  GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR 120

Query: 121 INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR 180
           INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR
Sbjct: 121 INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR 180

Query: 181 CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL 240
           CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL
Sbjct: 181 CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL 240

Query: 241 GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEVVNDHQSNKGKKTNFLK 300
           GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEVVNDHQSNKGKKTNFLK
Sbjct: 241 GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEVVNDHQSNKGKKTNFLK 300

Query: 301 KDKSMEWFTGSEE 313
           KDKSMEWFTGSEE
Sbjct: 301 KDKSMEWFTGSEE 313


>gi|56961678 speedy homolog A isoform 2 [Homo sapiens]
          Length = 286

 Score =  597 bits (1539), Expect = e-171
 Identities = 283/283 (100%), Positives = 283/283 (100%)

Query: 1   MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK 60
           MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK
Sbjct: 1   MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK 60

Query: 61  GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR 120
           GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR
Sbjct: 61  GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR 120

Query: 121 INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR 180
           INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR
Sbjct: 121 INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR 180

Query: 181 CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL 240
           CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL
Sbjct: 181 CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL 240

Query: 241 GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSE 283
           GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSE
Sbjct: 241 GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSE 283


>gi|56912202 speedy C [Homo sapiens]
          Length = 293

 Score =  184 bits (466), Expect = 1e-46
 Identities = 88/166 (53%), Positives = 112/166 (67%)

Query: 67  QRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIA 126
           Q Q++ AF  L +D  +Q+FL  D C +I+DKYLLAM  VYF+RA   +SE+T  + F+A
Sbjct: 55  QHQEVQAFLSLLEDSFVQEFLSKDPCFQISDKYLLAMVLVYFQRAHLKLSEYTHSSLFLA 114

Query: 127 LYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRRCCEEVM 186
           LYLAN +EED E  K EIFPWALGK+W      FL  RD+LW R+ +RA+VSR+CCEEVM
Sbjct: 115 LYLANDMEEDLEGPKCEIFPWALGKDWCLRVGKFLHQRDKLWARMGFRAVVSRQCCEEVM 174

Query: 187 AIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCG 232
           A  P H+ W R+R  HH G  R   +  V+LPRGP  +P  CS CG
Sbjct: 175 AKEPFHWAWTRDRRPHHGGVQRVCPQVPVRLPRGPGLSPPHCSPCG 220


>gi|189303549 speedy homolog E4 [Homo sapiens]
          Length = 237

 Score =  102 bits (254), Expect = 4e-22
 Identities = 58/147 (39%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query: 55  KSKRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFT 114
           K KR +   ++ +  +  AF +L  D ++Q FL  D   +++DKYLLAM   YF RA   
Sbjct: 92  KLKRKRASSVLPEHHE--AFNRLLGDPVVQKFLAWDKDLRVSDKYLLAMVIAYFSRAGLF 149

Query: 115 ISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYR 174
             ++ RI+FF+ALYLA+ +EED +  K +IF +  GKN+ +  P F KLR QL   + +R
Sbjct: 150 SWQYQRIHFFLALYLASDMEEDNQAPKQDIFSFLYGKNYSQR-PLFHKLRYQLLCSMRWR 208

Query: 175 AIVSRRCCEEVMAIAPTHYIWQRERSV 201
             VS    EE+ A  P H++W R+R++
Sbjct: 209 TWVSPEEMEEIQAYDPEHWVWARDRTL 235


>gi|239743254 PREDICTED: hypothetical protein XP_002342780 [Homo
           sapiens]
          Length = 575

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 24/152 (15%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+ FL  D   +++DKYLLAM   YF RA     ++ RI+FF+ALYLAN 
Sbjct: 421 AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLAND 480

Query: 133 VEEDEEETKYEIFPWALGKNW------------------------RKLFPNFLKLRDQLW 168
           +EED+E+ K  IF +  GK                          R     F KLR Q +
Sbjct: 481 MEEDDEDPKQNIFYFLYGKTRSRIPLVRNRRFQLCRCMNPRARKNRSQIALFQKLRFQFF 540

Query: 169 DRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
             +  RA VSR   EE+ A  P H++W R+R+
Sbjct: 541 CSMSGRAWVSREELEEIQAYDPEHWVWARDRA 572


>gi|239508929 PREDICTED: similar to Putative WBSCR19-like protein 7
           [Homo sapiens]
          Length = 575

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 24/152 (15%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+ FL  D   +++DKYLLAM   YF RA     ++ RI+FF+ALYLAN 
Sbjct: 421 AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLAND 480

Query: 133 VEEDEEETKYEIFPWALGKNW------------------------RKLFPNFLKLRDQLW 168
           +EED+E+ K  IF +  GK                          R     F KLR Q +
Sbjct: 481 MEEDDEDPKQNIFYFLYGKTRSRIPLVRNRRFQLCRCMNPRARKNRSQIALFQKLRFQFF 540

Query: 169 DRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
             +  RA VSR   EE+ A  P H++W R+R+
Sbjct: 541 CSMSGRAWVSREELEEIQAYDPEHWVWARDRA 572


>gi|118601064 speedy homolog E3 [Homo sapiens]
          Length = 172

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 57/152 (37%), Positives = 81/152 (53%), Gaps = 24/152 (15%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+ FL  D   +++DKYLLAM   YF RA     ++ RI+FF+ALYLAN 
Sbjct: 18  AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLAND 77

Query: 133 VEEDEEETKYEIFPWALG----------KNW----RKLFPN----------FLKLRDQLW 168
           +EED+E  K +IF +  G          K+W    R + P           F K R Q +
Sbjct: 78  MEEDDEAPKQKIFYFLYGKTHSHIPLRPKHWFQLCRPMNPRARKNCSQIALFQKRRFQFF 137

Query: 169 DRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
             +  RA VS    EE+ A  P H++W R+R+
Sbjct: 138 CSMRCRAWVSPEELEEIQAYDPEHWVWARDRA 169


>gi|30795188 Williams Beuren syndrome chromosome region 19 protein
           [Homo sapiens]
          Length = 336

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 48/107 (44%), Positives = 69/107 (64%), Gaps = 1/107 (0%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+ FL  D   +++DKYLLAM   YF RA F   ++ R++FF+ALYLAN 
Sbjct: 157 AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSWQYQRLHFFLALYLAND 216

Query: 133 VEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSR 179
           +EED+E++K  IF +  GKN R   P   K R QL+  ++ RA  +R
Sbjct: 217 MEEDDEDSKQNIFHFLYGKN-RSRIPLLRKRRFQLYRSMNPRARKNR 262


>gi|194595492 speedy homolog E5 [Homo sapiens]
          Length = 337

 Score = 86.3 bits (212), Expect = 3e-17
 Identities = 59/177 (33%), Positives = 83/177 (46%), Gaps = 49/177 (27%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+ FL  D   +++DKYLLAM   YF RA F   ++ RI+FF+ALYLAN 
Sbjct: 158 AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSWQYQRIHFFLALYLAND 217

Query: 133 VEEDEEETKYEIFPWALGKN----------W----RKLFPN------------------- 159
           +EED+E++K  IF +  GKN          W    R + P                    
Sbjct: 218 MEEDDEDSKQNIFHFLYGKNRSRIPLLRKRWFQLGRSMNPRARKNRSRIPLLRKRRFQLG 277

Query: 160 ----------------FLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
                           F K R Q +  +  RA VS    EE+ A  P H++W R+R+
Sbjct: 278 RSMNLRARKNRSQIVLFQKRRFQFFCSMSGRAWVSPEELEEIQAYDPEHWVWARDRA 334


>gi|239743228 PREDICTED: WBSCR19-like protein 8-like isoform 2 [Homo
           sapiens]
          Length = 402

 Score = 81.6 bits (200), Expect = 8e-16
 Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 1/125 (0%)

Query: 55  KSKRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFT 114
           K K  +   L++  +   AF +L +D +I+ FL  D   +++DKYLLAM  VYF RA   
Sbjct: 180 KMKLKRRRVLLVLPEHHEAFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIVYFSRAGLP 239

Query: 115 ISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYR 174
             ++ RI+FF+ALYLAN +EED+E++K  IF +  GK  R   P   K   QL   ++ R
Sbjct: 240 SWQYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYGKT-RSRIPLLRKRWFQLGRSMNPR 298

Query: 175 AIVSR 179
           A  +R
Sbjct: 299 ARKNR 303



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 160 FLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
           F KLR Q +  +  RA VS    EE+ A  P H++W R+R+
Sbjct: 359 FQKLRFQFFCSMSGRAWVSPEELEEIQAYDPEHWVWARDRA 399


>gi|239508903 PREDICTED: WBSCR19-like protein 8-like [Homo sapiens]
          Length = 402

 Score = 81.6 bits (200), Expect = 8e-16
 Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 1/125 (0%)

Query: 55  KSKRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFT 114
           K K  +   L++  +   AF +L +D +I+ FL  D   +++DKYLLAM  VYF RA   
Sbjct: 180 KMKLKRRRVLLVLPEHHEAFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIVYFSRAGLP 239

Query: 115 ISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYR 174
             ++ RI+FF+ALYLAN +EED+E++K  IF +  GK  R   P   K   QL   ++ R
Sbjct: 240 SWQYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYGKT-RSRIPLLRKRWFQLGRSMNPR 298

Query: 175 AIVSR 179
           A  +R
Sbjct: 299 ARKNR 303



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 160 FLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
           F KLR Q +  +  RA VS    EE+ A  P H++W R+R+
Sbjct: 359 FQKLRFQFFCSMSGRAWVSPEELEEIQAYDPEHWVWARDRA 399


>gi|226246595 speedy homolog E6 [Homo sapiens]
          Length = 402

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 1/107 (0%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+ FL  D   +++DKYLLAM   YF RA F   ++ RI+FF+ALYLAN 
Sbjct: 198 AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSWQYQRIHFFLALYLAND 257

Query: 133 VEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSR 179
           +EED+E++K  IF +   KN R   P   K   QL   ++ RA  +R
Sbjct: 258 MEEDDEDSKQNIFHFLYRKN-RSRIPLLRKRWFQLGHSMNPRARKNR 303



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 160 FLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
           F K R   +  +  RA VS    EE+ A  P H++W R+R+
Sbjct: 359 FQKRRFHFFCSMSCRAWVSPEELEEIQAYDPEHWVWARDRA 399


>gi|239743297 PREDICTED: speedy homolog E6 [Homo sapiens]
          Length = 402

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 1/107 (0%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+ FL  D   +++DKYLLAM   YF RA F   ++ RI+FF+ALYLAN 
Sbjct: 198 AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSWQYQRIHFFLALYLAND 257

Query: 133 VEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSR 179
           +EED+E++K  IF +   KN R   P   K   QL   ++ RA  +R
Sbjct: 258 MEEDDEDSKQNIFHFLYRKN-RSRIPLLRKRWFQLGHSMNPRARKNR 303



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 160 FLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
           F K R   +  +  RA VS    EE+ A  P H++W R+R+
Sbjct: 359 FQKRRFHFFCSMSCRAWVSPEELEEIQAYDPEHWVWARDRA 399


>gi|169170099 PREDICTED: similar to speedy homolog A [Homo sapiens]
          Length = 265

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 24/152 (15%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+  L  D   +++DKYLLAM   YF RA     ++ RI+FF+ALYLAN 
Sbjct: 111 AFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLAND 170

Query: 133 VEEDEEETKYEIFPW----------ALGKNWRKL--------------FPNFLKLRDQLW 168
           +EED+E  K  IF +           L + W +L                 F K R   +
Sbjct: 171 MEEDDEAPKQNIFYFLYEETRSHIPLLRELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 230

Query: 169 DRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
             +  RA VS    EE+ A  P H++W R+R+
Sbjct: 231 CSMRCRAWVSLEELEEIQAYDPEHWVWARDRA 262


>gi|239508980 PREDICTED: speedy homolog E6 (Xenopus laevis) [Homo
           sapiens]
          Length = 402

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 1/107 (0%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+ FL  D   +++DKYLLAM   YF RA F   ++ RI+FF+ALYLAN 
Sbjct: 198 AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSWQYQRIHFFLALYLAND 257

Query: 133 VEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSR 179
           +EED+E++K  IF +   KN R   P   K   QL   ++ RA  +R
Sbjct: 258 MEEDDEDSKQNIFHFLYRKN-RSRIPLLRKRWFQLGHSMNPRARKNR 303



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 160 FLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
           F K R   +  +  RA VS    EE+ A  P H++W R+R+
Sbjct: 359 FQKRRFHFFCSMSCRAWVSPEELEEIQAYDPEHWVWARDRA 399


>gi|239508919 PREDICTED: similar to speedy homolog A [Homo sapiens]
          Length = 265

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 24/152 (15%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+  L  D   +++DKYLLAM   YF RA     ++ RI+FF+ALYLAN 
Sbjct: 111 AFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLAND 170

Query: 133 VEEDEEETKYEIFPW----------ALGKNWRKL--------------FPNFLKLRDQLW 168
           +EED+E  K  IF +           L + W +L                 F K R   +
Sbjct: 171 MEEDDEAPKQNIFYFLYEETRSHIPLLRELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 230

Query: 169 DRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
             +  RA VS    EE+ A  P H++W R+R+
Sbjct: 231 CSMRCRAWVSLEELEEIQAYDPEHWVWARDRA 262


>gi|71979927 speedy homolog E2 [Homo sapiens]
          Length = 258

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 1/107 (0%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+ FL  D   +++DKYLLAM   YF RA F   ++ RI+FF+ALYLAN 
Sbjct: 54  AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSWQYQRIHFFLALYLAND 113

Query: 133 VEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSR 179
           +EED+E++K  IF +   KN R   P   K   QL   ++ RA  +R
Sbjct: 114 MEEDDEDSKQNIFHFLYRKN-RSRIPLLRKRWFQLGHSMNPRARKNR 159



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 160 FLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
           F K R   +  +  RA VS    EE+ A  P H++W R+R+
Sbjct: 215 FQKRRFHFFCSMSCRAWVSPEELEEIQAYDPEHWVWARDRA 255


>gi|239743311 PREDICTED: similar to speedy homolog A isoform 1 [Homo
           sapiens]
          Length = 402

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 1/107 (0%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+ FL  D   +++DKYLLAM   YF RA F   ++ RI+FF+ALYLAN 
Sbjct: 198 AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSWQYQRIHFFLALYLAND 257

Query: 133 VEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSR 179
           +EED+E++K  IF +   KN R   P   K   QL   ++ RA  +R
Sbjct: 258 MEEDDEDSKQNIFHFLYRKN-RSRIPLLRKPWFQLGHSMNPRARKNR 303



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 160 FLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
           F K R   +  +  RA VS    EE+ A  P H++W R+R+
Sbjct: 359 FQKRRFHFFCSMSCRAWVSPEELEEIQAYDPEHWVWARDRA 399


>gi|239508994 PREDICTED: similar to speedy homolog A isoform 7 [Homo
           sapiens]
          Length = 402

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 1/107 (0%)

Query: 73  AFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANT 132
           AF +L +D +I+ FL  D   +++DKYLLAM   YF RA F   ++ RI+FF+ALYLAN 
Sbjct: 198 AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSWQYQRIHFFLALYLAND 257

Query: 133 VEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSR 179
           +EED+E++K  IF +   KN R   P   K   QL   ++ RA  +R
Sbjct: 258 MEEDDEDSKQNIFHFLYRKN-RSRIPLLRKPWFQLGHSMNPRARKNR 303



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 160 FLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS 200
           F K R   +  +  RA VS    EE+ A  P H++W R+R+
Sbjct: 359 FQKRRFHFFCSMSCRAWVSPEELEEIQAYDPEHWVWARDRA 399


>gi|4503759 flavin containing monooxygenase 4 [Homo sapiens]
          Length = 558

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 14/69 (20%)

Query: 173 YRAIVSRRCCEEVMAIAPTHYI-WQRERSVHHSGAVRNYNRDE--VQLPRGPSATPV--- 226
           Y  +V+RRCC  +  + P+ ++ W +ER ++     + +N ++  + + +G  A  +   
Sbjct: 231 YNMMVTRRCCSFIAQVLPSRFLNWIQERKLN-----KRFNHEDYGLSITKGKKAKFIVND 285

Query: 227 ---DCSLCG 232
              +C LCG
Sbjct: 286 ELPNCILCG 294


>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
           sapiens]
          Length = 2715

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 17/73 (23%), Positives = 34/73 (46%)

Query: 9   ETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPKGPCLVIQR 68
           E  PT     K G  +S    + + L + +   + ++ E++T + +  KR  G  +  ++
Sbjct: 187 EQGPTPVEKKKKGKRKSETTVESLELDQGLTNPSLRSPEESTESTDSQKRRSGRQVKRRK 246

Query: 69  QDMTAFFKLFDDD 81
            +    FK+ DDD
Sbjct: 247 YNEDLDFKVVDDD 259


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.133    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,753,203
Number of Sequences: 37866
Number of extensions: 569778
Number of successful extensions: 1436
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1399
Number of HSP's gapped (non-prelim): 32
length of query: 313
length of database: 18,247,518
effective HSP length: 102
effective length of query: 211
effective length of database: 14,385,186
effective search space: 3035274246
effective search space used: 3035274246
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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