Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 56786144

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|56786144 dual specificity phosphatase 23 [Homo sapiens]
         (150 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|56786144 dual specificity phosphatase 23 [Homo sapiens]            311   1e-85
gi|116008458 CDC14 homolog B isoform 3 [Homo sapiens]                  63   8e-11
gi|4502699 CDC14 homolog B isoform 1 [Homo sapiens]                    63   8e-11
gi|15451936 CDC14 homolog B isoform 2 [Homo sapiens]                   63   8e-11
gi|15451933 CDC14 homolog A isoform 3 [Homo sapiens]                   59   1e-09
gi|15451929 CDC14 homolog A isoform 1 [Homo sapiens]                   59   1e-09
gi|15451931 CDC14 homolog A isoform 2 [Homo sapiens]                   59   1e-09
gi|30089952 protein tyrosine phosphatase domain containing 1 pro...    52   2e-07
gi|30089950 protein tyrosine phosphatase domain containing 1 pro...    52   2e-07
gi|166235184 KIAA1274 [Homo sapiens]                                   49   2e-06
gi|134142828 RNA guanylyltransferase and 5'-phosphatase [Homo sa...    48   3e-06
gi|38372911 dual specificity phosphatase 16 [Homo sapiens]             45   2e-05
gi|108802609 protein tyrosine phosphatase, non-receptor type 20 ...    44   4e-05
gi|108802611 protein tyrosine phosphatase, non-receptor type 20 ...    44   4e-05
gi|109138573 protein tyrosine phosphatase, non-receptor type 20A...    44   4e-05
gi|109138565 protein tyrosine phosphatase, non-receptor type 20A...    44   4e-05
gi|109138563 protein tyrosine phosphatase, non-receptor type 20A...    44   4e-05
gi|109138561 protein tyrosine phosphatase, non-receptor type 20A...    44   4e-05
gi|109138557 protein tyrosine phosphatase, non-receptor type 20A...    44   4e-05
gi|108802617 protein tyrosine phosphatase, non-receptor type 20 ...    44   4e-05
gi|108802607 protein tyrosine phosphatase, non-receptor type 20 ...    44   4e-05
gi|108802604 protein tyrosine phosphatase, non-receptor type 20 ...    44   4e-05
gi|153281158 dual specificity phosphatase 8 [Homo sapiens]             44   4e-05
gi|6005956 dual specificity phosphatase 12 [Homo sapiens]              43   9e-05
gi|4503421 dual specificity phosphatase 9 [Homo sapiens]               42   1e-04
gi|148224884 protein tyrosine phosphatase, mitochondrial 1 isofo...    42   2e-04
gi|14589856 protein tyrosine phosphatase type IVA, member 3 isof...    42   2e-04
gi|75750526 dual specificity phosphatase 28 [Homo sapiens]             42   3e-04
gi|5729993 protein tyrosine phosphatase, receptor type, E isofor...    40   7e-04
gi|18860859 protein tyrosine phosphatase, receptor type, E isofo...    40   7e-04

>gi|56786144 dual specificity phosphatase 23 [Homo sapiens]
          Length = 150

 Score =  311 bits (798), Expect = 1e-85
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MGVQPPNFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHR 60
           MGVQPPNFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHR
Sbjct: 1   MGVQPPNFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHR 60

Query: 61  LRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGD 120
           LRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGD
Sbjct: 61  LRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGD 120

Query: 121 AIAEIRRLRPGSIETYEQEKAVFQFYQRTK 150
           AIAEIRRLRPGSIETYEQEKAVFQFYQRTK
Sbjct: 121 AIAEIRRLRPGSIETYEQEKAVFQFYQRTK 150


>gi|116008458 CDC14 homolog B isoform 3 [Homo sapiens]
          Length = 461

 Score = 63.2 bits (152), Expect = 8e-11
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 21/154 (13%)

Query: 7   NFSWVLPGRLAGLALP----RLPAHY---------QFLLDLGVRHLVSLTER---GPPHS 50
           + +W++P R      P    RL + Y         Q+  +  V  ++ L +R       +
Sbjct: 178 DLNWIIPDRFIAFCGPHSRARLESGYHQHSPETYIQYFKNHNVTTIIRLNKRMYDAKRFT 237

Query: 51  DSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYL 110
           D+  G   H L   D   P    +  F+ I +  NA G A+ VHC  G GRTGT++ACY+
Sbjct: 238 DA--GFDHHDLFFADGSTPTDAIVKEFLDICE--NAEG-AIAVHCKAGLGRTGTLIACYI 292

Query: 111 VKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQ 144
           +K   + A + IA +R  RPGS+   +Q+  V +
Sbjct: 293 MKHYRMTAAETIAWVRICRPGSVIGPQQQFLVMK 326


>gi|4502699 CDC14 homolog B isoform 1 [Homo sapiens]
          Length = 459

 Score = 63.2 bits (152), Expect = 8e-11
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 21/154 (13%)

Query: 7   NFSWVLPGRLAGLALP----RLPAHY---------QFLLDLGVRHLVSLTER---GPPHS 50
           + +W++P R      P    RL + Y         Q+  +  V  ++ L +R       +
Sbjct: 215 DLNWIIPDRFIAFCGPHSRARLESGYHQHSPETYIQYFKNHNVTTIIRLNKRMYDAKRFT 274

Query: 51  DSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYL 110
           D+  G   H L   D   P    +  F+ I +  NA G A+ VHC  G GRTGT++ACY+
Sbjct: 275 DA--GFDHHDLFFADGSTPTDAIVKEFLDICE--NAEG-AIAVHCKAGLGRTGTLIACYI 329

Query: 111 VKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQ 144
           +K   + A + IA +R  RPGS+   +Q+  V +
Sbjct: 330 MKHYRMTAAETIAWVRICRPGSVIGPQQQFLVMK 363


>gi|15451936 CDC14 homolog B isoform 2 [Homo sapiens]
          Length = 498

 Score = 63.2 bits (152), Expect = 8e-11
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 21/154 (13%)

Query: 7   NFSWVLPGRLAGLALP----RLPAHY---------QFLLDLGVRHLVSLTER---GPPHS 50
           + +W++P R      P    RL + Y         Q+  +  V  ++ L +R       +
Sbjct: 215 DLNWIIPDRFIAFCGPHSRARLESGYHQHSPETYIQYFKNHNVTTIIRLNKRMYDAKRFT 274

Query: 51  DSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYL 110
           D+  G   H L   D   P    +  F+ I +  NA G A+ VHC  G GRTGT++ACY+
Sbjct: 275 DA--GFDHHDLFFADGSTPTDAIVKEFLDICE--NAEG-AIAVHCKAGLGRTGTLIACYI 329

Query: 111 VKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQ 144
           +K   + A + IA +R  RPGS+   +Q+  V +
Sbjct: 330 MKHYRMTAAETIAWVRICRPGSVIGPQQQFLVMK 363


>gi|15451933 CDC14 homolog A isoform 3 [Homo sapiens]
          Length = 383

 Score = 59.3 bits (142), Expect = 1e-09
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 21/147 (14%)

Query: 3   VQPPNFSWVLPGRLA-------------GLALPRLPAHYQFLLDLGVRHLVSLTER---G 46
           V+  +F+W++PG+               G  L    A++ +     V  +V L ++    
Sbjct: 175 VENGDFNWIVPGKFLAFSGPHPKSKIENGYPLHAPEAYFPYFKKHNVTAVVRLNKKIYEA 234

Query: 47  PPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTML 106
              +D+  G   + L   D   P+ + + RF+ I +  N  G A+ VHC  G GRTGT++
Sbjct: 235 KRFTDA--GFEHYDLFFIDGSTPSDNIVRRFLNICE--NTEG-AIAVHCKAGLGRTGTLI 289

Query: 107 ACYLVKERGLAAGDAIAEIRRLRPGSI 133
           ACY++K       + IA IR  RPGSI
Sbjct: 290 ACYVMKHYRFTHAEIIAWIRICRPGSI 316


>gi|15451929 CDC14 homolog A isoform 1 [Homo sapiens]
          Length = 594

 Score = 59.3 bits (142), Expect = 1e-09
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 21/147 (14%)

Query: 3   VQPPNFSWVLPGRLA-------------GLALPRLPAHYQFLLDLGVRHLVSLTER---G 46
           V+  +F+W++PG+               G  L    A++ +     V  +V L ++    
Sbjct: 175 VENGDFNWIVPGKFLAFSGPHPKSKIENGYPLHAPEAYFPYFKKHNVTAVVRLNKKIYEA 234

Query: 47  PPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTML 106
              +D+  G   + L   D   P+ + + RF+ I +  N  G A+ VHC  G GRTGT++
Sbjct: 235 KRFTDA--GFEHYDLFFIDGSTPSDNIVRRFLNICE--NTEG-AIAVHCKAGLGRTGTLI 289

Query: 107 ACYLVKERGLAAGDAIAEIRRLRPGSI 133
           ACY++K       + IA IR  RPGSI
Sbjct: 290 ACYVMKHYRFTHAEIIAWIRICRPGSI 316


>gi|15451931 CDC14 homolog A isoform 2 [Homo sapiens]
          Length = 623

 Score = 59.3 bits (142), Expect = 1e-09
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 21/147 (14%)

Query: 3   VQPPNFSWVLPGRLA-------------GLALPRLPAHYQFLLDLGVRHLVSLTER---G 46
           V+  +F+W++PG+               G  L    A++ +     V  +V L ++    
Sbjct: 175 VENGDFNWIVPGKFLAFSGPHPKSKIENGYPLHAPEAYFPYFKKHNVTAVVRLNKKIYEA 234

Query: 47  PPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTML 106
              +D+  G   + L   D   P+ + + RF+ I +  N  G A+ VHC  G GRTGT++
Sbjct: 235 KRFTDA--GFEHYDLFFIDGSTPSDNIVRRFLNICE--NTEG-AIAVHCKAGLGRTGTLI 289

Query: 107 ACYLVKERGLAAGDAIAEIRRLRPGSI 133
           ACY++K       + IA IR  RPGSI
Sbjct: 290 ACYVMKHYRFTHAEIIAWIRICRPGSI 316


>gi|30089952 protein tyrosine phosphatase domain containing 1
           protein isoform 1 [Homo sapiens]
          Length = 806

 Score = 52.0 bits (123), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 33/57 (57%)

Query: 91  VGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQFYQ 147
           V +HC  G GRTG ++ACYLV    + A  AI  +R  RP SI+T  Q   V +F Q
Sbjct: 238 VAIHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREFTQ 294


>gi|30089950 protein tyrosine phosphatase domain containing 1
           protein isoform 2 [Homo sapiens]
          Length = 754

 Score = 52.0 bits (123), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 33/57 (57%)

Query: 91  VGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQFYQ 147
           V +HC  G GRTG ++ACYLV    + A  AI  +R  RP SI+T  Q   V +F Q
Sbjct: 186 VAIHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREFTQ 242


>gi|166235184 KIAA1274 [Homo sapiens]
          Length = 856

 Score = 48.9 bits (115), Expect = 2e-06
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 8/84 (9%)

Query: 25  PAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEA 84
           P  Y+F   L ++ + S       H  +CPGLT HR+ +PDFC P  +  D+ ++ +  A
Sbjct: 595 PLTYRFQTCLTMQEVFS------QHRRACPGLTYHRIPMPDFCAPREEDFDQLLEALRAA 648

Query: 85  NARGEAVG--VHCALGFGRTGTML 106
            ++    G    C  G GRT T +
Sbjct: 649 LSKDPGTGFVFSCLSGQGRTTTAM 672



 Score = 31.6 bits (70), Expect = 0.26
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 11/95 (11%)

Query: 54  PGLTLHRLRIPDFCPPAPDQIDRFVQIVDE---------ANARGEAVGVHCALGFGRT-- 102
           P    HRL +P+   P   Q+D FV ++ E         A+    A+   C +G GRT  
Sbjct: 262 PTYRYHRLPLPEQGSPLEAQLDAFVSVLRETPSLLQLRDAHGPPPALVFSCQMGVGRTNL 321

Query: 103 GTMLACYLVKERGLAAGDAIAEIRRLRPGSIETYE 137
           G +L   ++  R        A   + +P  +E ++
Sbjct: 322 GMVLGTLILLHRSGTTSQPEAAPTQAKPLPMEQFQ 356


>gi|134142828 RNA guanylyltransferase and 5'-phosphatase [Homo
           sapiens]
          Length = 597

 Score = 48.1 bits (113), Expect = 3e-06
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 69  PAPDQIDRFVQIVDEANARG--EAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIR 126
           P  +  + F+++ +  N R   E +GVHC  GF RTG ++  +LV++   +   A+A   
Sbjct: 98  PTTENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFA 157

Query: 127 RLRPGSIETYEQEKAVFQFY 146
           + RP  I   +  K +F+ Y
Sbjct: 158 QARPPGIYKGDYLKELFRRY 177


>gi|38372911 dual specificity phosphatase 16 [Homo sapiens]
          Length = 665

 Score = 45.1 bits (105), Expect = 2e-05
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)

Query: 50  SDSCPGLTL----HRLRIP---DFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRT 102
           S++CP        H LR+P    FC      +D+ V  +++A A    V VHC  G  R+
Sbjct: 192 SNTCPKPDFIPESHFLRVPVNDSFCEKILPWLDKSVDFIEKAKASNGCVLVHCLAGISRS 251

Query: 103 GTMLACYLVKERGLAAGDAIAEIRRLRP 130
            T+   Y++K   ++  +A   ++  RP
Sbjct: 252 ATIAIAYIMKRMDMSLDEAYRFVKEKRP 279


>gi|108802609 protein tyrosine phosphatase, non-receptor type 20
           isoform 4 [Homo sapiens]
          Length = 269

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 68  PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLA-----CYLVKERGLAAGDAI 122
           P + D   ++++   +++  G  V VHC+ G GRTG  L      C +VK       D +
Sbjct: 176 PASADSFIKYIRYARKSHLTGPMV-VHCSAGIGRTGVFLCVDVVFCAIVKNCSFNIMDIV 234

Query: 123 AEIRRLRPGSIETYEQ 138
           A++R  R G ++T EQ
Sbjct: 235 AQMREQRSGMVQTKEQ 250


>gi|108802611 protein tyrosine phosphatase, non-receptor type 20
           isoform 5 [Homo sapiens]
          Length = 228

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 68  PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLA-----CYLVKERGLAAGDAI 122
           P + D   ++++   +++  G  V VHC+ G GRTG  L      C +VK       D +
Sbjct: 135 PASADSFIKYIRYARKSHLTGPMV-VHCSAGIGRTGVFLCVDVVFCAIVKNCSFNIMDIV 193

Query: 123 AEIRRLRPGSIETYEQ 138
           A++R  R G ++T EQ
Sbjct: 194 AQMREQRSGMVQTKEQ 209


>gi|109138573 protein tyrosine phosphatase, non-receptor type 20A
           isoform 8 [Homo sapiens]
          Length = 339

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 68  PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLA-----CYLVKERGLAAGDAI 122
           P + D   ++++   +++  G  V VHC+ G GRTG  L      C +VK       D +
Sbjct: 246 PASADSFIKYIRYARKSHLTGPMV-VHCSAGIGRTGVFLCVDVVFCAIVKNCSFNIMDIV 304

Query: 123 AEIRRLRPGSIETYEQ 138
           A++R  R G ++T EQ
Sbjct: 305 AQMREQRSGMVQTKEQ 320


>gi|109138565 protein tyrosine phosphatase, non-receptor type 20A
           isoform 5 [Homo sapiens]
          Length = 228

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 68  PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLA-----CYLVKERGLAAGDAI 122
           P + D   ++++   +++  G  V VHC+ G GRTG  L      C +VK       D +
Sbjct: 135 PASADSFIKYIRYARKSHLTGPMV-VHCSAGIGRTGVFLCVDVVFCAIVKNCSFNIMDIV 193

Query: 123 AEIRRLRPGSIETYEQ 138
           A++R  R G ++T EQ
Sbjct: 194 AQMREQRSGMVQTKEQ 209


>gi|109138563 protein tyrosine phosphatase, non-receptor type 20A
           isoform 4 [Homo sapiens]
          Length = 269

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 68  PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLA-----CYLVKERGLAAGDAI 122
           P + D   ++++   +++  G  V VHC+ G GRTG  L      C +VK       D +
Sbjct: 176 PASADSFIKYIRYARKSHLTGPMV-VHCSAGIGRTGVFLCVDVVFCAIVKNCSFNIMDIV 234

Query: 123 AEIRRLRPGSIETYEQ 138
           A++R  R G ++T EQ
Sbjct: 235 AQMREQRSGMVQTKEQ 250


>gi|109138561 protein tyrosine phosphatase, non-receptor type 20A
           isoform 3 [Homo sapiens]
          Length = 411

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 68  PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLA-----CYLVKERGLAAGDAI 122
           P + D   ++++   +++  G  V VHC+ G GRTG  L      C +VK       D +
Sbjct: 318 PASADSFIKYIRYARKSHLTGPMV-VHCSAGIGRTGVFLCVDVVFCAIVKNCSFNIMDIV 376

Query: 123 AEIRRLRPGSIETYEQ 138
           A++R  R G ++T EQ
Sbjct: 377 AQMREQRSGMVQTKEQ 392


>gi|109138557 protein tyrosine phosphatase, non-receptor type 20A
           isoform 1 [Homo sapiens]
          Length = 420

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 68  PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLA-----CYLVKERGLAAGDAI 122
           P + D   ++++   +++  G  V VHC+ G GRTG  L      C +VK       D +
Sbjct: 327 PASADSFIKYIRYARKSHLTGPMV-VHCSAGIGRTGVFLCVDVVFCAIVKNCSFNIMDIV 385

Query: 123 AEIRRLRPGSIETYEQ 138
           A++R  R G ++T EQ
Sbjct: 386 AQMREQRSGMVQTKEQ 401


>gi|108802617 protein tyrosine phosphatase, non-receptor type 20
           isoform 8 [Homo sapiens]
          Length = 339

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 68  PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLA-----CYLVKERGLAAGDAI 122
           P + D   ++++   +++  G  V VHC+ G GRTG  L      C +VK       D +
Sbjct: 246 PASADSFIKYIRYARKSHLTGPMV-VHCSAGIGRTGVFLCVDVVFCAIVKNCSFNIMDIV 304

Query: 123 AEIRRLRPGSIETYEQ 138
           A++R  R G ++T EQ
Sbjct: 305 AQMREQRSGMVQTKEQ 320


>gi|108802607 protein tyrosine phosphatase, non-receptor type 20
           isoform 3 [Homo sapiens]
          Length = 411

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 68  PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLA-----CYLVKERGLAAGDAI 122
           P + D   ++++   +++  G  V VHC+ G GRTG  L      C +VK       D +
Sbjct: 318 PASADSFIKYIRYARKSHLTGPMV-VHCSAGIGRTGVFLCVDVVFCAIVKNCSFNIMDIV 376

Query: 123 AEIRRLRPGSIETYEQ 138
           A++R  R G ++T EQ
Sbjct: 377 AQMREQRSGMVQTKEQ 392


>gi|108802604 protein tyrosine phosphatase, non-receptor type 20
           isoform 1 [Homo sapiens]
          Length = 420

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 68  PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLA-----CYLVKERGLAAGDAI 122
           P + D   ++++   +++  G  V VHC+ G GRTG  L      C +VK       D +
Sbjct: 327 PASADSFIKYIRYARKSHLTGPMV-VHCSAGIGRTGVFLCVDVVFCAIVKNCSFNIMDIV 385

Query: 123 AEIRRLRPGSIETYEQ 138
           A++R  R G ++T EQ
Sbjct: 386 AQMREQRSGMVQTKEQ 401


>gi|153281158 dual specificity phosphatase 8 [Homo sapiens]
          Length = 625

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 50  SDSCPGLTL----HRLRIP---DFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRT 102
           S+SCP          +R+P   ++C      +D+ ++ +D+A      V VHC  G  R+
Sbjct: 194 SNSCPKPDFICESRFMRVPINDNYCEKLLPWLDKSIEFIDKAKLSSCQVIVHCLAGISRS 253

Query: 103 GTMLACYLVKERGLAAGDAIAEIRRLRP 130
            T+   Y++K  G+++ DA   ++  RP
Sbjct: 254 ATIAIAYIMKTMGMSSDDAYRFVKDRRP 281


>gi|6005956 dual specificity phosphatase 12 [Homo sapiens]
          Length = 340

 Score = 43.1 bits (100), Expect = 9e-05
 Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 9/125 (7%)

Query: 11  VLPGR-LAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLT-LHRLRIPDFCP 68
           V PG    G A    P H   L + G+  ++++    P      PG+  L RL +P    
Sbjct: 30  VQPGLYFGGAAAVAEPDH---LREAGITAVLTVDSEEPSFKAG-PGVEDLWRLFVPALDK 85

Query: 69  PAPD---QIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEI 125
           P  D    +DR V  + +A A G AV VHC  G  R+  ++  +L+K   L    A  ++
Sbjct: 86  PETDLLSHLDRCVAFIGQARAEGRAVLVHCHAGVSRSVAIITAFLMKTDQLPFEKAYEKL 145

Query: 126 RRLRP 130
           + L+P
Sbjct: 146 QILKP 150


>gi|4503421 dual specificity phosphatase 9 [Homo sapiens]
          Length = 384

 Score = 42.4 bits (98), Expect = 1e-04
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 9/121 (7%)

Query: 11  VLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPA 70
           +LP    G A  R  A+ + L  LG+R+++++T   P   +        ++ I D     
Sbjct: 207 ILPNLYLGSA--RDSANLESLAKLGIRYILNVTPNLPNFFEKNGDFHYKQIPISDHWS-- 262

Query: 71  PDQIDRF----VQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIR 126
              + RF    ++ +DEA ++   V VHC  G  R+ T+   YL+++  L+  DA   ++
Sbjct: 263 -QNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVK 321

Query: 127 R 127
           R
Sbjct: 322 R 322


>gi|148224884 protein tyrosine phosphatase, mitochondrial 1 isoform
           1 [Homo sapiens]
          Length = 201

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 14/133 (10%)

Query: 20  ALPRLPAHYQFLLDLGVRHLVSLTERGPPH-----SDSCPGLTLHRLRIPDFCP---PAP 71
           ALP      Q + D  VR ++++ E          S     L + +LR+        P  
Sbjct: 49  ALPLRSLTRQLVQDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTL 108

Query: 72  DQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLA---AGDAIAEIR-- 126
           D + + VQ   +  + G+ V VHC  G  R+ TM+A YL++    +   A  AIA+IR  
Sbjct: 109 DNLQKGVQFALKYQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSY 168

Query: 127 -RLRPGSIETYEQ 138
             +RPG ++  ++
Sbjct: 169 IHIRPGQLDVLKE 181


>gi|14589856 protein tyrosine phosphatase type IVA, member 3 isoform
           1 [Homo sapiens]
          Length = 173

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 55  GLTLHRLRIPDFCPPAPDQIDRFVQIVDE--ANARGEAVGVHCALGFGRTGTMLACYLVK 112
           G+T+      D  PP    ++ ++ +V      A G  V VHC  G GR   ++A  L+ 
Sbjct: 62  GITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLVALALI- 120

Query: 113 ERGLAAGDAIAEIRRLRPGSIET 135
           E G+   DAI  IR+ R G+I +
Sbjct: 121 ESGMKYEDAIQFIRQKRRGAINS 143


>gi|75750526 dual specificity phosphatase 28 [Homo sapiens]
          Length = 176

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 9/129 (6%)

Query: 5   PPNFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIP 64
           PP    V P    G A  R     + L   GV   V+++ + P      PG+    LR+P
Sbjct: 16  PPPLVRVAPSLFLGSA--RAAGAEEQLARAGVTLCVNVSRQQP--GPRAPGVA--ELRVP 69

Query: 65  DFCPPAPD---QIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDA 121
            F  PA D    ++     ++ A   G A  V+C  G  R+  +   YL++ RGL+   A
Sbjct: 70  VFDDPAEDLLAHLEPTCAAMEAAVRAGGACLVYCKNGRSRSAAVCTAYLMRHRGLSLAKA 129

Query: 122 IAEIRRLRP 130
              ++  RP
Sbjct: 130 FQMVKSARP 138


>gi|5729993 protein tyrosine phosphatase, receptor type, E isoform 1
           precursor [Homo sapiens]
          Length = 700

 Score = 40.0 bits (92), Expect = 7e-04
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 91  VGVHCALGFGRTGTMLACYLVKERGLAAG-----DAIAEIRRLRPGSIETYEQEKAVFQF 145
           + VHC+ G GRTGT +A   + ER  A G      A+  +R  RP  ++T EQ +  ++ 
Sbjct: 626 ITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKV 685

Query: 146 YQ 147
            Q
Sbjct: 686 VQ 687



 Score = 36.6 bits (83), Expect = 0.008
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 7/94 (7%)

Query: 58  LHRLRIPDFCPP-APDQIDRFVQIVDEAN-ARGEAVGVHCALGFGRTGTMLA-----CYL 110
           LH    PDF  P  P  + +F++ V   N      + VHC+ G GRTGT +        +
Sbjct: 296 LHFTSWPDFGVPFTPIGMLKFLKKVKTLNPVHAGPIVVHCSAGVGRTGTFIVIDAMMAMM 355

Query: 111 VKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQ 144
             E+ +   + ++ IR  RP  ++T  Q   ++Q
Sbjct: 356 HAEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQ 389


>gi|18860859 protein tyrosine phosphatase, receptor type, E isoform
           2 [Homo sapiens]
          Length = 642

 Score = 40.0 bits (92), Expect = 7e-04
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 91  VGVHCALGFGRTGTMLACYLVKERGLAAG-----DAIAEIRRLRPGSIETYEQEKAVFQF 145
           + VHC+ G GRTGT +A   + ER  A G      A+  +R  RP  ++T EQ +  ++ 
Sbjct: 568 ITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKV 627

Query: 146 YQ 147
            Q
Sbjct: 628 VQ 629



 Score = 36.6 bits (83), Expect = 0.008
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 7/94 (7%)

Query: 58  LHRLRIPDFCPP-APDQIDRFVQIVDEAN-ARGEAVGVHCALGFGRTGTMLA-----CYL 110
           LH    PDF  P  P  + +F++ V   N      + VHC+ G GRTGT +        +
Sbjct: 238 LHFTSWPDFGVPFTPIGMLKFLKKVKTLNPVHAGPIVVHCSAGVGRTGTFIVIDAMMAMM 297

Query: 111 VKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQ 144
             E+ +   + ++ IR  RP  ++T  Q   ++Q
Sbjct: 298 HAEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQ 331


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.143    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,712,167
Number of Sequences: 37866
Number of extensions: 303271
Number of successful extensions: 1078
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 941
Number of HSP's gapped (non-prelim): 193
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press