Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 134133308
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|134133308 cytochrome b5 reductase-like [Homo sapiens]
(315 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|134133308 cytochrome b5 reductase-like [Homo sapiens] 656 0.0
gi|47778923 cytochrome b5 reductase b5R.2 [Homo sapiens] 105 7e-23
gi|4503327 cytochrome b5 reductase 3 isoform m [Homo sapiens] 94 1e-19
gi|193794826 cytochrome b5 reductase 3 isoform s [Homo sapiens] 94 1e-19
gi|6552328 cytochrome b5 reductase 3 isoform s [Homo sapiens] 94 1e-19
gi|49574502 cytochrome b5 reductase 1 [Homo sapiens] 88 1e-17
gi|84875541 cytochrome b5 reductase 4 [Homo sapiens] 74 2e-13
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 34 0.15
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 33 0.33
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 33 0.33
gi|219842348 NADPH oxidase 4 isoform c [Homo sapiens] 30 2.8
gi|8393843 NADPH oxidase 4 isoform a [Homo sapiens] 30 2.8
gi|148536873 NADPH oxidase 1 isoform long [Homo sapiens] 29 4.8
gi|6996021 cytochrome b-245 beta polypeptide [Homo sapiens] 29 4.8
gi|7669510 NADPH oxidase 1 isoform long variant [Homo sapiens] 29 4.8
gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2... 28 8.1
gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1... 28 8.1
gi|9961250 ATP-binding cassette, subfamily B, member 4 isoform B... 28 8.1
gi|9961252 ATP-binding cassette, subfamily B, member 4 isoform C... 28 8.1
gi|4505771 ATP-binding cassette, subfamily B, member 4 isoform A... 28 8.1
gi|47519929 cell recognition molecule CASPR3 [Homo sapiens] 28 8.1
>gi|134133308 cytochrome b5 reductase-like [Homo sapiens]
Length = 315
Score = 656 bits (1692), Expect = 0.0
Identities = 315/315 (100%), Positives = 315/315 (100%)
Query: 1 MMAEREEDDDTEEAWMQLRPTEPLPSQCCGSGCSPCVFDLYHRDLARWEAAQASKDRSLL 60
MMAEREEDDDTEEAWMQLRPTEPLPSQCCGSGCSPCVFDLYHRDLARWEAAQASKDRSLL
Sbjct: 1 MMAEREEDDDTEEAWMQLRPTEPLPSQCCGSGCSPCVFDLYHRDLARWEAAQASKDRSLL 60
Query: 61 RGPESQSCPSKLNPETFVAFCIIAMDRLTKDTYRVRFALPGNSQLGLRPGQHLILRGIVD 120
RGPESQSCPSKLNPETFVAFCIIAMDRLTKDTYRVRFALPGNSQLGLRPGQHLILRGIVD
Sbjct: 61 RGPESQSCPSKLNPETFVAFCIIAMDRLTKDTYRVRFALPGNSQLGLRPGQHLILRGIVD 120
Query: 121 DLEIQRAYTPISPANAEGYFEVLIKCYQMGLMSRYVESWRVGDTAFWRGPFGDFFYKPNQ 180
DLEIQRAYTPISPANAEGYFEVLIKCYQMGLMSRYVESWRVGDTAFWRGPFGDFFYKPNQ
Sbjct: 121 DLEIQRAYTPISPANAEGYFEVLIKCYQMGLMSRYVESWRVGDTAFWRGPFGDFFYKPNQ 180
Query: 181 YGELLLLAAGTGLAPMVPILQSITDNENDETFVTLVGCFKTFESIYLKTFLQEQARFWNV 240
YGELLLLAAGTGLAPMVPILQSITDNENDETFVTLVGCFKTFESIYLKTFLQEQARFWNV
Sbjct: 181 YGELLLLAAGTGLAPMVPILQSITDNENDETFVTLVGCFKTFESIYLKTFLQEQARFWNV 240
Query: 241 RTFFVLSQESSSEQLPWSYQEKTHFGHLGQDLIKELVSCCRRKPFALVCGSAEFTKDIAR 300
RTFFVLSQESSSEQLPWSYQEKTHFGHLGQDLIKELVSCCRRKPFALVCGSAEFTKDIAR
Sbjct: 241 RTFFVLSQESSSEQLPWSYQEKTHFGHLGQDLIKELVSCCRRKPFALVCGSAEFTKDIAR 300
Query: 301 CLLCAGLTEDSYFLF 315
CLLCAGLTEDSYFLF
Sbjct: 301 CLLCAGLTEDSYFLF 315
>gi|47778923 cytochrome b5 reductase b5R.2 [Homo sapiens]
Length = 276
Score = 105 bits (261), Expect = 7e-23
Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 73 NPETFVAFCIIAMDRLTKDTYRVRFALPGNSQ-LGLRPGQHLILRGIVDDLEIQRAYTPI 131
+PE +I ++++ +T R RF LP LGL G ++ L +D+ + RAYTP+
Sbjct: 13 DPEAKYPLPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKIDNELVVRAYTPV 72
Query: 132 SPANAEGYFEVLIKCY---------QMGLMSRYVESWRVGDTAFWRGPFGDFFY------ 176
S + G+ +++IK Y + G M++Y+E+ ++G+T F+RGP G FY
Sbjct: 73 SSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPGNL 132
Query: 177 --KPNQYGE--------LLLLAAGTGLAPMVPILQSITDNENDETFVTLVGCFKTFESIY 226
+P+Q E L ++A GTG+ PM+ +++ IT + +D T ++L+ +T E I
Sbjct: 133 GIRPDQTSEPKKTLADHLGMIAGGTGITPMLQLIRHITKDPSDRTRMSLIFANQTEEDIL 192
Query: 227 LKTFLQEQARFWNVRTFFVLSQESSSEQLPWSYQEKTHFGHLGQDLIKELVSCCRRKPFA 286
++ L+E AR + F L + W Y G + D+IKE + +
Sbjct: 193 VRKELEEIARTHPDQ--FNLWYTLDRPPIGWKYSS----GFVTADMIKEHLPPPAKSTLI 246
Query: 287 LVCGSAEFTKDIAR-CLLCAGLTEDSYFLF 315
LVCG + A L G T+D F +
Sbjct: 247 LVCGPPPLIQTAAHPNLEKLGYTQDMIFTY 276
>gi|4503327 cytochrome b5 reductase 3 isoform m [Homo sapiens]
Length = 301
Score = 94.4 bits (233), Expect = 1e-19
Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 32/244 (13%)
Query: 73 NPETFVAFCIIAMDRLTKDTYRVRFALPGNSQ-LGLRPGQHLILRGIVDDLEIQRAYTPI 131
+P+ +I + ++ DT R RFALP LGL GQH+ L +D + R YTPI
Sbjct: 38 SPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPI 97
Query: 132 SPANAEGYFEVLIKCY---------QMGLMSRYVESWRVGDTAFWRGPF--------GDF 174
S + +G+ +++IK Y G MS+Y+ES ++GDT +RGP G F
Sbjct: 98 SSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKF 157
Query: 175 FYKPNQYGELL--------LLAAGTGLAPMVPILQSITDNENDETFVTLVGCFKTFESIY 226
+P++ + ++A GTG+ PM+ ++++I + +D T L+ +T + I
Sbjct: 158 AIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDIL 217
Query: 227 LKTFLQEQARFWNVRTFFVLSQESSSEQLPWSYQEKTHFGHLGQDLIKELVSCCRRKPFA 286
L+ L+E + R + + + E W Y + G + +++I++ + +P
Sbjct: 218 LRPELEELRNKHSARFKLWYTLDRAPE--AWDYGQ----GFVNEEMIRDHLPPPEEEPLV 271
Query: 287 LVCG 290
L+CG
Sbjct: 272 LMCG 275
>gi|193794826 cytochrome b5 reductase 3 isoform s [Homo sapiens]
Length = 278
Score = 94.4 bits (233), Expect = 1e-19
Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 32/244 (13%)
Query: 73 NPETFVAFCIIAMDRLTKDTYRVRFALPGNSQ-LGLRPGQHLILRGIVDDLEIQRAYTPI 131
+P+ +I + ++ DT R RFALP LGL GQH+ L +D + R YTPI
Sbjct: 15 SPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPI 74
Query: 132 SPANAEGYFEVLIKCY---------QMGLMSRYVESWRVGDTAFWRGPF--------GDF 174
S + +G+ +++IK Y G MS+Y+ES ++GDT +RGP G F
Sbjct: 75 SSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKF 134
Query: 175 FYKPNQYGELL--------LLAAGTGLAPMVPILQSITDNENDETFVTLVGCFKTFESIY 226
+P++ + ++A GTG+ PM+ ++++I + +D T L+ +T + I
Sbjct: 135 AIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDIL 194
Query: 227 LKTFLQEQARFWNVRTFFVLSQESSSEQLPWSYQEKTHFGHLGQDLIKELVSCCRRKPFA 286
L+ L+E + R + + + E W Y + G + +++I++ + +P
Sbjct: 195 LRPELEELRNKHSARFKLWYTLDRAPE--AWDYGQ----GFVNEEMIRDHLPPPEEEPLV 248
Query: 287 LVCG 290
L+CG
Sbjct: 249 LMCG 252
>gi|6552328 cytochrome b5 reductase 3 isoform s [Homo sapiens]
Length = 278
Score = 94.4 bits (233), Expect = 1e-19
Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 32/244 (13%)
Query: 73 NPETFVAFCIIAMDRLTKDTYRVRFALPGNSQ-LGLRPGQHLILRGIVDDLEIQRAYTPI 131
+P+ +I + ++ DT R RFALP LGL GQH+ L +D + R YTPI
Sbjct: 15 SPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPI 74
Query: 132 SPANAEGYFEVLIKCY---------QMGLMSRYVESWRVGDTAFWRGPF--------GDF 174
S + +G+ +++IK Y G MS+Y+ES ++GDT +RGP G F
Sbjct: 75 SSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKF 134
Query: 175 FYKPNQYGELL--------LLAAGTGLAPMVPILQSITDNENDETFVTLVGCFKTFESIY 226
+P++ + ++A GTG+ PM+ ++++I + +D T L+ +T + I
Sbjct: 135 AIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDIL 194
Query: 227 LKTFLQEQARFWNVRTFFVLSQESSSEQLPWSYQEKTHFGHLGQDLIKELVSCCRRKPFA 286
L+ L+E + R + + + E W Y + G + +++I++ + +P
Sbjct: 195 LRPELEELRNKHSARFKLWYTLDRAPE--AWDYGQ----GFVNEEMIRDHLPPPEEEPLV 248
Query: 287 LVCG 290
L+CG
Sbjct: 249 LMCG 252
>gi|49574502 cytochrome b5 reductase 1 [Homo sapiens]
Length = 305
Score = 87.8 bits (216), Expect = 1e-17
Identities = 70/247 (28%), Positives = 118/247 (47%), Gaps = 36/247 (14%)
Query: 72 LNPETFVAFCIIAMDRLTKDTYRVRFALP-GNSQLGLRPGQHLILRGIVDDLEIQRAYTP 130
L+P ++ ++ +T R RFALP + LGL G+H+ L +D + R YTP
Sbjct: 41 LDPNEKYLLRLLDKTTVSHNTKRFRFALPTAHHTLGLPVGKHIYLSTRIDGSLVIRPYTP 100
Query: 131 ISPANAEGYFEVLIKCYQMGL---------MSRYVESWRVGDTAFWRGPFGDFFY----- 176
++ +GY +++IK Y G+ MS+Y++S +VGD +RGP G Y
Sbjct: 101 VTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGH 160
Query: 177 -----------KPNQYGELLLLAAGTGLAPMVPILQSITDNENDETFVTLVGCFKTFESI 225
+P +L ++A GTG+ PM+ ++++I D T L+ +T + I
Sbjct: 161 FNIQPNKKSPPEPRVAKKLGMIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDI 220
Query: 226 YLKTFLQE-QARFWN-VRTFFVLSQESSSEQLPWSYQEKTHFGHLGQDLIKELVSCCRRK 283
L+ L+E QAR+ N + +F L W+Y + G + D+I+E +
Sbjct: 221 ILREDLEELQARYPNRFKLWFTLDHPPKD----WAYSK----GFVTADMIREHLPAPGDD 272
Query: 284 PFALVCG 290
L+CG
Sbjct: 273 VLVLLCG 279
>gi|84875541 cytochrome b5 reductase 4 [Homo sapiens]
Length = 521
Score = 73.6 bits (179), Expect = 2e-13
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 26/237 (10%)
Query: 82 IIAMDRLTKDTYRVRFALPGNSQLGLRPGQHLILRGIVDDLEIQRAYTPIS--------- 132
+I+ + +T DT LP ++ L + GQH+ L+ + EI + YTP+S
Sbjct: 280 LISKEDVTHDTRLFCLMLPPSTHLQVPIGQHVYLKLPITGTEIVKPYTPVSGSLLSEFKE 339
Query: 133 ---PANAEGYFEVLIKCYQMGLMSRYVESWRVGDTAFWRGPFGDF-FYKPNQYGELLLLA 188
P N YF LIK Y GL + ++ ++GD P G+F K + +L LLA
Sbjct: 340 PVLPNNKYIYF--LIKIYPTGLFTPELDRLQIGDFVSVSSPEGNFKISKFQELEDLFLLA 397
Query: 189 AGTGLAPMVPILQSITDNENDETFVTLVGCFKTFESIYLKTFLQEQA-RFWNVRTFFVLS 247
AGTG PMV IL + V L+ KT + I ++ L++ A + + FVLS
Sbjct: 398 AGTGFTPMVKILNYALTDIPSLRKVKLMFFNKTEDDIIWRSQLEKLAFKDKRLDVEFVLS 457
Query: 248 QESSSEQLPWSYQEKTHFGHLGQDLIKELV--SCCRRKPFALVCGSAEFTKDIARCL 302
S W+ ++ GH+ L+ E + + + K +CG FT+ R L
Sbjct: 458 APISE----WNGKQ----GHISPALLSEFLKRNLDKSKVLVCICGPVPFTEQGVRLL 506
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 34.3 bits (77), Expect = 0.15
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 19 RPTEPLPSQCCGSGCSPCVFDLYHRDLARWEAAQASKDRSLLRGPESQSCP-SKLNPETF 77
R + L S GSG P L++R A+ R+ +RG E ++CP S L P +
Sbjct: 197 RRCQGLGSSWGGSGTPPPPRALWNRH------GGAAGARAQVRGSEKRACPGSTLPPSSV 250
Query: 78 VAFCIIAMDRLTKDTYRVRFALPGNSQLGLR 108
+A C+ R R RF+ P + G R
Sbjct: 251 LAGCVGTRARGHGGVQRQRFSAPSSHSTGAR 281
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 33.1 bits (74), Expect = 0.33
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 19 RPTEPLPSQCCGSGCSPCVFDLYHRDLARWEAAQASKDRSLLRGPESQSCP-SKLNPETF 77
R + L S GSG P L++R A+ R+ +RG E ++CP S L P +
Sbjct: 197 RRCQGLGSSWGGSGTPPPPRALWNRH------GGAAGARAQVRGSEKRACPGSTLPPSSV 250
Query: 78 VAFCIIAMDRLTKDTYRVRFALP-GNSQLGLRP-GQHLILRGIVDDLEIQRA 127
+A C+ R R RF+ P +S G RP G+ ++D + RA
Sbjct: 251 LAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARA 302
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 33.1 bits (74), Expect = 0.33
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 19 RPTEPLPSQCCGSGCSPCVFDLYHRDLARWEAAQASKDRSLLRGPESQSCP-SKLNPETF 77
R + L S GSG P L++R A+ R+ +RG E ++CP S L P +
Sbjct: 197 RRCQGLGSSWGGSGTPPPPRALWNRH------GGAAGARAQVRGSEKRACPGSTLPPSSV 250
Query: 78 VAFCIIAMDRLTKDTYRVRFALP-GNSQLGLRP-GQHLILRGIVDDLEIQRA 127
+A C+ R R RF+ P +S G RP G+ ++D + RA
Sbjct: 251 LAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARA 302
>gi|219842348 NADPH oxidase 4 isoform c [Homo sapiens]
Length = 554
Score = 30.0 bits (66), Expect = 2.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 169 GPFGDFFYKPNQYGELLLLAAGTGLAPMVPILQSITDN 206
GPFG F + Y L +A G G+ P IL ++ D+
Sbjct: 387 GPFGSPFEESLNYEVSLCVAGGIGVTPFASILNTLLDD 424
>gi|8393843 NADPH oxidase 4 isoform a [Homo sapiens]
Length = 578
Score = 30.0 bits (66), Expect = 2.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 169 GPFGDFFYKPNQYGELLLLAAGTGLAPMVPILQSITDN 206
GPFG F + Y L +A G G+ P IL ++ D+
Sbjct: 411 GPFGSPFEESLNYEVSLCVAGGIGVTPFASILNTLLDD 448
>gi|148536873 NADPH oxidase 1 isoform long [Homo sapiens]
Length = 564
Score = 29.3 bits (64), Expect = 4.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 169 GPFGDFFYKPNQYGELLLLAAGTGLAPMVPILQSI 203
GPFG QY +L+ AG G+ P IL+SI
Sbjct: 383 GPFGTASEDVFQYEVAVLVGAGIGVTPFASILKSI 417
>gi|6996021 cytochrome b-245 beta polypeptide [Homo sapiens]
Length = 570
Score = 29.3 bits (64), Expect = 4.8
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 155 YVESWRVGDTAFWRGPFGDFFYKPNQYGELLLLAAGTGLAPMVPILQSI 203
+ ++W++ A GPFG Y ++L+ AG G+ P IL+S+
Sbjct: 376 FQDAWKLPKIAV-DGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSV 423
>gi|7669510 NADPH oxidase 1 isoform long variant [Homo sapiens]
Length = 515
Score = 29.3 bits (64), Expect = 4.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 169 GPFGDFFYKPNQYGELLLLAAGTGLAPMVPILQSI 203
GPFG QY +L+ AG G+ P IL+SI
Sbjct: 383 GPFGTASEDVFQYEVAVLVGAGIGVTPFASILKSI 417
>gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2
[Homo sapiens]
Length = 1207
Score = 28.5 bits (62), Expect = 8.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 36 CVFDLYHRDLARWEAAQASKDRSLLRGPESQSCPSKLNPETFVAFCIIAMDRLTKDTYRV 95
C+ +LY+ + E A+ K + L+ G S SCP P+T + + L+ +Y
Sbjct: 332 CLENLYYNGVDVTELAKKHKPQILMMGNVSFSCP---QPQT------VPVTFLSSRSY-- 380
Query: 96 RFALPGNS 103
ALPGNS
Sbjct: 381 -LALPGNS 387
>gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1
[Homo sapiens]
Length = 1288
Score = 28.5 bits (62), Expect = 8.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 36 CVFDLYHRDLARWEAAQASKDRSLLRGPESQSCPSKLNPETFVAFCIIAMDRLTKDTYRV 95
C+ +LY+ + E A+ K + L+ G S SCP P+T + + L+ +Y
Sbjct: 332 CLENLYYNGVDVTELAKKHKPQILMMGNVSFSCP---QPQT------VPVTFLSSRSY-- 380
Query: 96 RFALPGNS 103
ALPGNS
Sbjct: 381 -LALPGNS 387
>gi|9961250 ATP-binding cassette, subfamily B, member 4 isoform B
[Homo sapiens]
Length = 1286
Score = 28.5 bits (62), Expect = 8.1
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 121 DLEIQRAYTPISPANAEGYFEVLIKCYQMGLMSRYVESWRVGDTAFWRGPFGDFFYKPNQ 180
DLE + T P +AEG FE+ I Q ++ V+ V T F + D +
Sbjct: 2 DLEAAKNGTAWRPTSAEGDFELGISSKQKRKKTKTVKMIGV-LTLFRYSDWQDKLFM--S 58
Query: 181 YGELLLLAAGTGLAPMVPILQSITDNENDETFVTLVGCF 219
G ++ +A G+GL M+ + +TD FV G F
Sbjct: 59 LGTIMAIAHGSGLPLMMIVFGEMTDK-----FVDTAGNF 92
>gi|9961252 ATP-binding cassette, subfamily B, member 4 isoform C
[Homo sapiens]
Length = 1232
Score = 28.5 bits (62), Expect = 8.1
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 121 DLEIQRAYTPISPANAEGYFEVLIKCYQMGLMSRYVESWRVGDTAFWRGPFGDFFYKPNQ 180
DLE + T P +AEG FE+ I Q ++ V+ V T F + D +
Sbjct: 2 DLEAAKNGTAWRPTSAEGDFELGISSKQKRKKTKTVKMIGV-LTLFRYSDWQDKLFM--S 58
Query: 181 YGELLLLAAGTGLAPMVPILQSITDNENDETFVTLVGCF 219
G ++ +A G+GL M+ + +TD FV G F
Sbjct: 59 LGTIMAIAHGSGLPLMMIVFGEMTDK-----FVDTAGNF 92
>gi|4505771 ATP-binding cassette, subfamily B, member 4 isoform A
[Homo sapiens]
Length = 1279
Score = 28.5 bits (62), Expect = 8.1
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 121 DLEIQRAYTPISPANAEGYFEVLIKCYQMGLMSRYVESWRVGDTAFWRGPFGDFFYKPNQ 180
DLE + T P +AEG FE+ I Q ++ V+ V T F + D +
Sbjct: 2 DLEAAKNGTAWRPTSAEGDFELGISSKQKRKKTKTVKMIGV-LTLFRYSDWQDKLFM--S 58
Query: 181 YGELLLLAAGTGLAPMVPILQSITDNENDETFVTLVGCF 219
G ++ +A G+GL M+ + +TD FV G F
Sbjct: 59 LGTIMAIAHGSGLPLMMIVFGEMTDK-----FVDTAGNF 92
>gi|47519929 cell recognition molecule CASPR3 [Homo sapiens]
Length = 1288
Score = 28.5 bits (62), Expect = 8.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 36 CVFDLYHRDLARWEAAQASKDRSLLRGPESQSCPSKLNPETFVAFCIIAMDRLTKDTYRV 95
C+ +LY+ + E A+ K + L+ G S SCP P+T + + L+ +Y
Sbjct: 332 CLENLYYNGVDVTELAKKHKPQILMMGNVSFSCP---QPQT------VPVTFLSSRSY-- 380
Query: 96 RFALPGNS 103
ALPGNS
Sbjct: 381 -LALPGNS 387
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,713,700
Number of Sequences: 37866
Number of extensions: 562520
Number of successful extensions: 1358
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1328
Number of HSP's gapped (non-prelim): 21
length of query: 315
length of database: 18,247,518
effective HSP length: 102
effective length of query: 213
effective length of database: 14,385,186
effective search space: 3064044618
effective search space used: 3064044618
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.