Guide to the Human Genome
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Search of human proteins with 5453722

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5453722 lysophospholipase 1 [Homo sapiens]
         (230 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5453722 lysophospholipase 1 [Homo sapiens]                         470   e-133
gi|9966764 lysophospholipase II [Homo sapiens]                        329   1e-90
gi|20270341 lysophospholipase-like 1 [Homo sapiens]                   106   2e-23
gi|4502809 chitotriosidase [Homo sapiens]                              30   1.3  
gi|53829385 leucine rich repeat containing 37B [Homo sapiens]          30   1.3  
gi|157389005 calpain 2 isoform 1 [Homo sapiens]                        30   1.7  
gi|225703100 calpain 2 isoform 2 [Homo sapiens]                        30   1.7  
gi|88853865 isoamyl acetate-hydrolyzing esterase 1 homolog [Homo...    29   3.0  
gi|169167822 PREDICTED: similar to hCG17429 [Homo sapiens]             28   8.6  
gi|169167904 PREDICTED: similar to hCG17429 [Homo sapiens]             28   8.6  
gi|239742531 PREDICTED: similar to hCG17429 [Homo sapiens]             28   8.6  
gi|194353976 transcription factor AP-2 epsilon (activating enhan...    28   8.6  

>gi|5453722 lysophospholipase 1 [Homo sapiens]
          Length = 230

 Score =  470 bits (1210), Expect = e-133
 Identities = 230/230 (100%), Positives = 230/230 (100%)

Query: 1   MCGNNMSTPLPAIVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRP 60
           MCGNNMSTPLPAIVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRP
Sbjct: 1   MCGNNMSTPLPAIVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRP 60

Query: 61  VTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQ 120
           VTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQ
Sbjct: 61  VTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQ 120

Query: 121 GGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGDCDPLVPLM 180
           GGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGDCDPLVPLM
Sbjct: 121 GGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGDCDPLVPLM 180

Query: 181 FGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLLPPID 230
           FGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLLPPID
Sbjct: 181 FGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLLPPID 230


>gi|9966764 lysophospholipase II [Homo sapiens]
          Length = 231

 Score =  329 bits (843), Expect = 1e-90
 Identities = 157/232 (67%), Positives = 188/232 (81%), Gaps = 4/232 (1%)

Query: 1   MCGNNMSTPL---PAIVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAP 57
           MCGN MS PL    A V  A + TAAVIFLHGLGDTGH WA+A + IR  H+KYICPHAP
Sbjct: 1   MCGNTMSVPLLTDAATVSGAERETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAP 60

Query: 58  VRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGG 117
             PVTLNM + MPSWFD++GLSPD+ EDE+GIK+AAENIKALI+ E+KNGIP+NRI+LGG
Sbjct: 61  RIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGG 120

Query: 118 FSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGDCDPLV 177
           FSQGGALSLYTALT    LAG+ ALSCWLPL  +FPQ   G A +D++ILQCHG+ DP+V
Sbjct: 121 FSQGGALSLYTALTCPHPLAGIVALSCWLPLHRAFPQAANGSA-KDLAILQCHGELDPMV 179

Query: 178 PLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLLPPI 229
           P+ FG+LT EKL+++V PA V FKTY G+MHSSC QEM  VK+F++KLLPP+
Sbjct: 180 PVRFGALTAEKLRSVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLLPPV 231


>gi|20270341 lysophospholipase-like 1 [Homo sapiens]
          Length = 237

 Score =  106 bits (264), Expect = 2e-23
 Identities = 74/220 (33%), Positives = 107/220 (48%), Gaps = 7/220 (3%)

Query: 13  IVPAARKATAAVIFLHGLGDTGHG---WAEAFAG--IRSSHIKYICPHAPVRPVTLNMNV 67
           IV  A + +A++IFLHG GD+G G   W +      +   HIK I P AP R  T     
Sbjct: 13  IVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGG 72

Query: 68  AMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLY 127
               WFD   ++ D  E    I    + +  LID+EVK+GI  NRI++GGFS GG ++++
Sbjct: 73  ISNVWFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMH 132

Query: 128 TALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGDCDPLVPLMFGSLTVE 187
            A    Q +AGV ALS +L   ++  Q           + QCHG  D LV   +   T  
Sbjct: 133 LAYRNHQDVAGVFALSSFLNKASAVYQALQKSNGVLPELFQCHGTADELVLHSWAEETNS 192

Query: 188 KLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLLP 227
            LK+L       F ++  + H   + E+  +K +I   LP
Sbjct: 193 MLKSL--GVTTKFHSFPNVYHELSKTELDILKLWILTKLP 230


>gi|4502809 chitotriosidase [Homo sapiens]
          Length = 466

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 71  SWFDIIGL-SPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTA 129
           SW  + G  SP  +  E     A+ N+ A + Q ++ G P++++ILG  + G + +L ++
Sbjct: 217 SWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASS 276

Query: 130 LTTQ 133
             T+
Sbjct: 277 SDTR 280


>gi|53829385 leucine rich repeat containing 37B [Homo sapiens]
          Length = 947

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 7/39 (17%)

Query: 45 RSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQ 83
          RSSH+ +  PHAP  P       A P  FD +G S  SQ
Sbjct: 51 RSSHLPWESPHAPAPP-------AAPGDFDYLGPSASSQ 82


>gi|157389005 calpain 2 isoform 1 [Homo sapiens]
          Length = 700

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 153 PQGPIGGANRDISILQCHGDCDPLVPLMFGSLTV-EKLKTLVNPANVTF-KTYEGMMHSS 210
           PQ  IGGA R        GDC  L  +   SLT+ E++   V P N +F + Y G+ H  
Sbjct: 85  PQFIIGGATRTDICQGALGDCWLLAAI--ASLTLNEEILARVVPLNQSFQENYAGIFHFQ 142

Query: 211 CQQEMMDVKQFIDKLLPPID 230
             Q    V+  +D  LP  D
Sbjct: 143 FWQYGEWVEVVVDDRLPTKD 162


>gi|225703100 calpain 2 isoform 2 [Homo sapiens]
          Length = 622

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 153 PQGPIGGANRDISILQCHGDCDPLVPLMFGSLTV-EKLKTLVNPANVTF-KTYEGMMHSS 210
           PQ  IGGA R        GDC  L  +   SLT+ E++   V P N +F + Y G+ H  
Sbjct: 7   PQFIIGGATRTDICQGALGDCWLLAAI--ASLTLNEEILARVVPLNQSFQENYAGIFHFQ 64

Query: 211 CQQEMMDVKQFIDKLLPPID 230
             Q    V+  +D  LP  D
Sbjct: 65  FWQYGEWVEVVVDDRLPTKD 84


>gi|88853865 isoamyl acetate-hydrolyzing esterase 1 homolog [Homo
           sapiens]
          Length = 248

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 41  FAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDI--IGLSPDSQEDESGIKQAAENIKA 98
           F+G  +   K I P    +  +L++ VA+  +F      L  ++ +    +++ A N+K+
Sbjct: 54  FSGYNTRWAKIILPRLIRKGNSLDIPVAVTIFFGANDSALKDENPKQHIPLEEYAANLKS 113

Query: 99  LIDQEVKNGIPSNRIIL 115
           ++       IP NR+IL
Sbjct: 114 MVQYLKSVDIPENRVIL 130


>gi|169167822 PREDICTED: similar to hCG17429 [Homo sapiens]
          Length = 353

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 3/93 (3%)

Query: 109 PSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQ 168
           P+    L  F   G L    A +  QK    T+ +  L  +AS+PQGP     +   +  
Sbjct: 80  PAPLCSLTAFFPPGPLHPIAARSPNQK---ATSRNAPLSSKASYPQGPFHSRGQAKPLCL 136

Query: 169 CHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFK 201
           C G   P  P  F S +  +   + N A   F+
Sbjct: 137 CLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFR 169


>gi|169167904 PREDICTED: similar to hCG17429 [Homo sapiens]
          Length = 353

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 3/93 (3%)

Query: 109 PSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQ 168
           P+    L  F   G L    A +  QK    T+ +  L  +AS+PQGP     +   +  
Sbjct: 80  PAPLCSLTAFFPPGPLHPIAARSPNQK---ATSRNAPLSSKASYPQGPFHSRGQAKPLCL 136

Query: 169 CHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFK 201
           C G   P  P  F S +  +   + N A   F+
Sbjct: 137 CLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFR 169


>gi|239742531 PREDICTED: similar to hCG17429 [Homo sapiens]
          Length = 353

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 3/93 (3%)

Query: 109 PSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQ 168
           P+    L  F   G L    A +  QK    T+ +  L  +AS+PQGP     +   +  
Sbjct: 80  PAPLCSLTAFFPPGPLHPIAARSPNQK---ATSRNAPLSSKASYPQGPFHSRGQAKPLCL 136

Query: 169 CHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFK 201
           C G   P  P  F S +  +   + N A   F+
Sbjct: 137 CLGLRPPAQPPRFPSASPCQSNLVPNAAAEVFR 169


>gi|194353976 transcription factor AP-2 epsilon (activating enhancer
           binding protein 2 epsilon) [Homo sapiens]
          Length = 442

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 15  PAARKATAAVIFLHGLGDTGHGWAEAFAGI 44
           P    ATA    LHGL D  HG A+A  G+
Sbjct: 128 PRRDYATAVPRLLHGLADGAHGLADAPLGL 157


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,764,539
Number of Sequences: 37866
Number of extensions: 362486
Number of successful extensions: 858
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 849
Number of HSP's gapped (non-prelim): 12
length of query: 230
length of database: 18,247,518
effective HSP length: 99
effective length of query: 131
effective length of database: 14,498,784
effective search space: 1899340704
effective search space used: 1899340704
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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