Guide to the Human Genome
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Name: RPP21 Sequence: fasta or formatted (154aa) NCBI GI: 13376253
Description:

ribonuclease P 21

Referenced in:

RNases and RNA Stability

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         11           2
 C cysteine            5.2          8           1
 D aspartate           4.5          7           1
 E glutamate           3.9          6           2
 F phenylalanine       2.6          4           1
 G glycine             5.2          8           1
 H histidine           1.9          3           1
 I isoleucine          1.3          2           1
 K lysine              3.2          5           1
 L leucine            11.7         18           2
 M methionine          1.3          2           1
 N asparagine          3.2          5           1
 P proline             6.5         10           1
 Q glutamine          10.4         16           1
 R arginine           11.7         18           2
 S serine              6.5         10           2
 T threonine           6.5         10           1
 V valine              3.9          6           1
 W tryptophan          1.3          2           1
 Y tyrosine            1.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribonuclease P 21 
IFIH1                 0.027   interferon induced with helicase C domain 1 
LOC642398             0.017   PREDICTED: hypothetical protein 
KCP                   0.013   cysteine rich BMP regulator 2 isoform 1 
INSL3                 0.010   insulin-like 3 precursor 
ACCN3                 0.010   amiloride-sensitive cation channel 3 isoform a 
ACCN3                 0.010   amiloride-sensitive cation channel 3 isoform b 
ACCN3                 0.010   amiloride-sensitive cation channel 3 isoform c 
LOC100289383          0.007   PREDICTED: hypothetical protein XP_002344164 
KIAA1305              0.007   hypothetical protein LOC57523 
LOC100131001          0.007   PREDICTED: hypothetical protein 
THBS1                 0.007   thrombospondin 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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