Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 50593112
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50593112 nudix-type motif 13 [Homo sapiens]
(352 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50593112 nudix-type motif 13 [Homo sapiens] 717 0.0
gi|13899267 nudix-type motif 12 [Homo sapiens] 163 2e-40
gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens] 36 0.045
gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens] 36 0.045
gi|40288282 nudix-type motif 1 isoform p22 [Homo sapiens] 36 0.045
gi|40288280 nudix-type motif 1 isoform p18 [Homo sapiens] 36 0.045
gi|40288278 nudix-type motif 1 isoform p22 [Homo sapiens] 36 0.045
gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens] 36 0.045
gi|40288274 nudix-type motif 1 isoform p18 [Homo sapiens] 36 0.045
gi|20149583 nudix-type motif 6 isoform a [Homo sapiens] 32 1.1
gi|8922792 nudix-type motif 15 [Homo sapiens] 30 2.5
gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type... 30 3.3
>gi|50593112 nudix-type motif 13 [Homo sapiens]
Length = 352
Score = 717 bits (1850), Expect = 0.0
Identities = 352/352 (100%), Positives = 352/352 (100%)
Query: 1 MSLYCGIACRRKFFWCYRLLSTYVTKTRYLFELKEDDDACKKAQQTGAFYLFHSLAPLLQ 60
MSLYCGIACRRKFFWCYRLLSTYVTKTRYLFELKEDDDACKKAQQTGAFYLFHSLAPLLQ
Sbjct: 1 MSLYCGIACRRKFFWCYRLLSTYVTKTRYLFELKEDDDACKKAQQTGAFYLFHSLAPLLQ 60
Query: 61 TSAHQYLAPRHSLLELERLLGKFGQDAQRIEDSVLIGCSEQQEAWFALDLGLDSSFSISA 120
TSAHQYLAPRHSLLELERLLGKFGQDAQRIEDSVLIGCSEQQEAWFALDLGLDSSFSISA
Sbjct: 61 TSAHQYLAPRHSLLELERLLGKFGQDAQRIEDSVLIGCSEQQEAWFALDLGLDSSFSISA 120
Query: 121 SLHKPEMETELKGSFIELRKALFQLNARDASLLSTAQALLRWHDAHQFCSRSGQPTKKNV 180
SLHKPEMETELKGSFIELRKALFQLNARDASLLSTAQALLRWHDAHQFCSRSGQPTKKNV
Sbjct: 121 SLHKPEMETELKGSFIELRKALFQLNARDASLLSTAQALLRWHDAHQFCSRSGQPTKKNV 180
Query: 181 AGSKRVCPSNNIIYYPQMAPVAITLVSDGTRCLLARQSSFPKGMYSALAGFCDIGESVEE 240
AGSKRVCPSNNIIYYPQMAPVAITLVSDGTRCLLARQSSFPKGMYSALAGFCDIGESVEE
Sbjct: 181 AGSKRVCPSNNIIYYPQMAPVAITLVSDGTRCLLARQSSFPKGMYSALAGFCDIGESVEE 240
Query: 241 TIRREVAEEVGLEVESLQYYASQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWF 300
TIRREVAEEVGLEVESLQYYASQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWF
Sbjct: 241 TIRREVAEEVGLEVESLQYYASQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWF 300
Query: 301 SHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQLIKEWVEKQTCSSLPA 352
SHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQLIKEWVEKQTCSSLPA
Sbjct: 301 SHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQLIKEWVEKQTCSSLPA 352
>gi|13899267 nudix-type motif 12 [Homo sapiens]
Length = 462
Score = 163 bits (413), Expect = 2e-40
Identities = 116/307 (37%), Positives = 164/307 (53%), Gaps = 45/307 (14%)
Query: 55 LAPLLQTSAHQYLAPRHSL--------LELERLLGKFGQDAQRIEDSVLIGCSEQQEAWF 106
L L T YLA + LE++ L + + R E+ L+ AWF
Sbjct: 176 LCQLNYTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLV-------AWF 228
Query: 107 ALDLGLDSSFSISASLHKPEMETELKGSFIEL-RKALFQLNARDASLLSTAQALLRWHDA 165
AL G+D I+A K E F+ AL QL ++A +++ A+++L WH
Sbjct: 229 AL--GIDP---IAAEEFKQRHENCY---FLHPPMPALLQLKEKEAGVVAQARSVLAWHSR 280
Query: 166 HQFCSRSGQPTKKNVAGSKRVC-----PSNNIIY---YPQMAPVAITLV--SDGTRCLLA 215
++FC G TK G KR+C PS N ++ YP++ PV I V DGT+CLL
Sbjct: 281 YKFCPTCGNATKIEEGGYKRLCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLG 340
Query: 216 RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYASQHWPFPSGSLMIA 275
RQ FP GM++ LAGF + GE++E+ +RREV EE G++V +QY A Q WP PS SLMI
Sbjct: 341 RQKRFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGHVQYVACQPWPMPS-SLMIG 399
Query: 276 CHATVKPGQTEIQVNLRELETAAWFSHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISH 335
C A TEI+V+ E+E A WF+ ++V L + +QQ F++PP AI+H
Sbjct: 400 CLALAV--STEIKVDKNEIEDARWFTREQVLDVLTK----GKQQ----AFFVPPSRAIAH 449
Query: 336 QLIKEWV 342
QLIK W+
Sbjct: 450 QLIKHWI 456
>gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 36.2 bits (82), Expect = 0.045
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 203 ITLVSDGTRCLLA-RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYA 261
+ LV R LL ++ F G ++ G GE++E+ RRE+ EE GL V++L
Sbjct: 32 LVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVG 91
Query: 262 SQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWFSHDEV 305
+ F ++ H V E+ WF D++
Sbjct: 92 QIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMR-PCWFQLDQI 134
>gi|40288284 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 36.2 bits (82), Expect = 0.045
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 203 ITLVSDGTRCLLA-RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYA 261
+ LV R LL ++ F G ++ G GE++E+ RRE+ EE GL V++L
Sbjct: 9 LVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVG 68
Query: 262 SQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWFSHDEV 305
+ F ++ H V E+ WF D++
Sbjct: 69 QIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMR-PCWFQLDQI 111
>gi|40288282 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 36.2 bits (82), Expect = 0.045
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 203 ITLVSDGTRCLLA-RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYA 261
+ LV R LL ++ F G ++ G GE++E+ RRE+ EE GL V++L
Sbjct: 32 LVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVG 91
Query: 262 SQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWFSHDEV 305
+ F ++ H V E+ WF D++
Sbjct: 92 QIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMR-PCWFQLDQI 134
>gi|40288280 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 36.2 bits (82), Expect = 0.045
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 203 ITLVSDGTRCLLA-RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYA 261
+ LV R LL ++ F G ++ G GE++E+ RRE+ EE GL V++L
Sbjct: 9 LVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVG 68
Query: 262 SQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWFSHDEV 305
+ F ++ H V E+ WF D++
Sbjct: 69 QIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMR-PCWFQLDQI 111
>gi|40288278 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 36.2 bits (82), Expect = 0.045
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 203 ITLVSDGTRCLLA-RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYA 261
+ LV R LL ++ F G ++ G GE++E+ RRE+ EE GL V++L
Sbjct: 32 LVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVG 91
Query: 262 SQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWFSHDEV 305
+ F ++ H V E+ WF D++
Sbjct: 92 QIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMR-PCWFQLDQI 134
>gi|40288276 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 36.2 bits (82), Expect = 0.045
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 203 ITLVSDGTRCLLA-RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYA 261
+ LV R LL ++ F G ++ G GE++E+ RRE+ EE GL V++L
Sbjct: 9 LVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVG 68
Query: 262 SQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWFSHDEV 305
+ F ++ H V E+ WF D++
Sbjct: 69 QIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMR-PCWFQLDQI 111
>gi|40288274 nudix-type motif 1 isoform p18 [Homo sapiens]
Length = 156
Score = 36.2 bits (82), Expect = 0.045
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 203 ITLVSDGTRCLLA-RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYA 261
+ LV R LL ++ F G ++ G GE++E+ RRE+ EE GL V++L
Sbjct: 9 LVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVG 68
Query: 262 SQHWPFPSGSLMIACHATVKPGQTEIQVNLRELETAAWFSHDEV 305
+ F ++ H V E+ WF D++
Sbjct: 69 QIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMR-PCWFQLDQI 111
>gi|20149583 nudix-type motif 6 isoform a [Homo sapiens]
Length = 316
Score = 31.6 bits (70), Expect = 1.1
Identities = 34/145 (23%), Positives = 53/145 (36%), Gaps = 8/145 (5%)
Query: 168 FCSRSGQPTKKNVAGSKRVCPSNNIIYYPQMAPVAITLVSDGTRCLLARQSSFP-KGMYS 226
FC + + R PS Y VA + + TR +L Q K M+
Sbjct: 113 FCFHHAESDSSTLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWK 172
Query: 227 ALAGFCDIGESVEETIRREVAEEVGLEVE-----SLQYYASQHWPFPSGSLMIACHATVK 281
G + E + +T REV EE G++ E S++ + F + I C +K
Sbjct: 173 FPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICR--LK 230
Query: 282 PGQTEIQVNLRELETAAWFSHDEVA 306
P I E W +++A
Sbjct: 231 PYSFTINFCQEECLRCEWMDLNDLA 255
>gi|8922792 nudix-type motif 15 [Homo sapiens]
Length = 164
Score = 30.4 bits (67), Expect = 2.5
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 211 RCLLA--RQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQY 259
RC+L R+ S G + G + GE+ EE +RE EE L ++++ +
Sbjct: 27 RCVLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHF 77
>gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type
motif 18 [Homo sapiens]
Length = 323
Score = 30.0 bits (66), Expect = 3.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 222 KGMYSALAGFCDIGESVEETIRREVAEEVGLEVE 255
+G + AG + GE++ E ++REV EE GL E
Sbjct: 68 RGSWYLPAGRMEPGETIVEALQREVKEEAGLHCE 101
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,219,439
Number of Sequences: 37866
Number of extensions: 549277
Number of successful extensions: 1254
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1240
Number of HSP's gapped (non-prelim): 12
length of query: 352
length of database: 18,247,518
effective HSP length: 103
effective length of query: 249
effective length of database: 14,347,320
effective search space: 3572482680
effective search space used: 3572482680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.