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Search of human proteins with 5031631
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5031631 scavenger receptor class B, member 2 [Homo sapiens]
(478 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5031631 scavenger receptor class B, member 2 [Homo sapiens] 975 0.0
gi|132566680 scavenger receptor class B, member 1 isoform 2 [Hom... 285 8e-77
gi|132566684 scavenger receptor class B, member 1 isoform 1 [Hom... 282 4e-76
gi|188536065 CD36 antigen [Homo sapiens] 270 2e-72
gi|188536063 CD36 antigen [Homo sapiens] 270 2e-72
gi|48375178 CD36 antigen [Homo sapiens] 270 2e-72
gi|48375176 CD36 antigen [Homo sapiens] 270 2e-72
gi|48375180 CD36 antigen [Homo sapiens] 270 2e-72
gi|217272874 coiled-coil domain containing 37 [Homo sapiens] 30 4.8
gi|61102725 la related protein isoform 2 [Homo sapiens] 29 8.2
gi|39725634 la related protein isoform 1 [Homo sapiens] 29 8.2
>gi|5031631 scavenger receptor class B, member 2 [Homo sapiens]
Length = 478
Score = 975 bits (2521), Expect = 0.0
Identities = 478/478 (100%), Positives = 478/478 (100%)
Query: 1 MGRCCFYTAGTLSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPV 60
MGRCCFYTAGTLSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPV
Sbjct: 1 MGRCCFYTAGTLSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPV 60
Query: 61 YTQFYFFNVTNPEEILRGETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFE 120
YTQFYFFNVTNPEEILRGETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFE
Sbjct: 61 YTQFYFFNVTNPEEILRGETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFE 120
Query: 121 RDQSVGDPKIDLIRTLNIPVLTVIEWSQVHFLREIIEAMLKAYQQKLFVTHTVDELLWGY 180
RDQSVGDPKIDLIRTLNIPVLTVIEWSQVHFLREIIEAMLKAYQQKLFVTHTVDELLWGY
Sbjct: 121 RDQSVGDPKIDLIRTLNIPVLTVIEWSQVHFLREIIEAMLKAYQQKLFVTHTVDELLWGY 180
Query: 181 KDEILSLIHVFRPDISPYFGLFYEKNGTNDGDYVFLTGEDSYLNFTKIVEWNGKTSLDWW 240
KDEILSLIHVFRPDISPYFGLFYEKNGTNDGDYVFLTGEDSYLNFTKIVEWNGKTSLDWW
Sbjct: 181 KDEILSLIHVFRPDISPYFGLFYEKNGTNDGDYVFLTGEDSYLNFTKIVEWNGKTSLDWW 240
Query: 241 ITDKCNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDYESVQGLPAFRYKVPAE 300
ITDKCNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDYESVQGLPAFRYKVPAE
Sbjct: 241 ITDKCNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDYESVQGLPAFRYKVPAE 300
Query: 301 ILANTSDNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQ 360
ILANTSDNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQ
Sbjct: 301 ILANTSDNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQ 360
Query: 361 EDHETFVDINPLTGIILKAAKRFQINIYVKKLDDFVETGDIRTMVFPVMYLNESVHIDKE 420
EDHETFVDINPLTGIILKAAKRFQINIYVKKLDDFVETGDIRTMVFPVMYLNESVHIDKE
Sbjct: 361 EDHETFVDINPLTGIILKAAKRFQINIYVKKLDDFVETGDIRTMVFPVMYLNESVHIDKE 420
Query: 421 TASRLKSMINTTLIITNIPYIIMALGVFFGLVFTWLACKGQGSMDEGTADERAPLIRT 478
TASRLKSMINTTLIITNIPYIIMALGVFFGLVFTWLACKGQGSMDEGTADERAPLIRT
Sbjct: 421 TASRLKSMINTTLIITNIPYIIMALGVFFGLVFTWLACKGQGSMDEGTADERAPLIRT 478
>gi|132566680 scavenger receptor class B, member 1 isoform 2 [Homo
sapiens]
Length = 506
Score = 285 bits (728), Expect = 8e-77
Identities = 157/465 (33%), Positives = 256/465 (55%), Gaps = 17/465 (3%)
Query: 10 GTLSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNV 69
G LL V ++V + + Q + K + + + +F+ W++ P+P Y YFF+V
Sbjct: 15 GVAGLLCAVLGAVMIV--MVPSLIKQQVLKNVRIDPSSLSFNMWKEIPIPFYLSVYFFDV 72
Query: 70 TNPEEILRGETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPK 129
NP EIL+GE P+V E GPY YRE R+K+NI F +N T +S + + + F+ +S G
Sbjct: 73 MNPSEILKGEKPQVRERGPYVYREFRHKSNITFNNNDT-VSFLEYRTFQFQPSKSHGSES 131
Query: 130 IDLIRTLNIPVL--TVIEWSQVHFLREIIEAMLKAYQQKLFVTHTVDELLWGYKDEILSL 187
D I NI VL V+ ++ L+ I+ ++ F+ TV E++WGYKD +++L
Sbjct: 132 -DYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIMWGYKDPLVNL 190
Query: 188 IHVFRPDISPY---FGLFYEKNGTNDGDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDK 244
I+ + P + P+ FGLF E N ++ G + TG + + +WNG + +D+W +D+
Sbjct: 191 INKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGLSKVDFWHSDQ 250
Query: 245 CNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDYESVQGLPAFRYKVPAEILAN 304
CNMINGT G + P +T + L + + CRS+ + + + +G+P +R+ P + AN
Sbjct: 251 CNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYRFVAPKTLFAN 310
Query: 305 TS---DNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQE 361
S N GFC CL SG+ NVS C+ AP+ +S PHF AD A+ G+HPNQE
Sbjct: 311 GSIYPPNEGFC----PCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTGLHPNQE 366
Query: 362 DHETFVDINPLTGIILKAAKRFQINIYVKKLDDFVETGDIRTMVFPVMYLNESVHIDKET 421
H F+DI+P+TGI + + + Q+++Y+K + +TG I +V P+++ ES ++ ET
Sbjct: 367 AHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESGAMEGET 426
Query: 422 ASRL-KSMINTTLIITNIPYIIMALGVFFGLVFTWLACKGQGSMD 465
++ ++ Y+++ALG LV + QG D
Sbjct: 427 LHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVICQIRSQGPED 471
>gi|132566684 scavenger receptor class B, member 1 isoform 1 [Homo
sapiens]
Length = 509
Score = 282 bits (722), Expect = 4e-76
Identities = 154/452 (34%), Positives = 252/452 (55%), Gaps = 17/452 (3%)
Query: 10 GTLSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNV 69
G LL V ++V + + Q + K + + + +F+ W++ P+P Y YFF+V
Sbjct: 15 GVAGLLCAVLGAVMIV--MVPSLIKQQVLKNVRIDPSSLSFNMWKEIPIPFYLSVYFFDV 72
Query: 70 TNPEEILRGETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPK 129
NP EIL+GE P+V E GPY YRE R+K+NI F +N T +S + + + F+ +S G
Sbjct: 73 MNPSEILKGEKPQVRERGPYVYREFRHKSNITFNNNDT-VSFLEYRTFQFQPSKSHGSES 131
Query: 130 IDLIRTLNIPVL--TVIEWSQVHFLREIIEAMLKAYQQKLFVTHTVDELLWGYKDEILSL 187
D I NI VL V+ ++ L+ I+ ++ F+ TV E++WGYKD +++L
Sbjct: 132 -DYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIMWGYKDPLVNL 190
Query: 188 IHVFRPDISPY---FGLFYEKNGTNDGDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDK 244
I+ + P + P+ FGLF E N ++ G + TG + + +WNG + +D+W +D+
Sbjct: 191 INKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGLSKVDFWHSDQ 250
Query: 245 CNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDYESVQGLPAFRYKVPAEILAN 304
CNMINGT G + P +T + L + + CRS+ + + + +G+P +R+ P + AN
Sbjct: 251 CNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYRFVAPKTLFAN 310
Query: 305 TS---DNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQE 361
S N GFC CL SG+ NVS C+ AP+ +S PHF AD A+ G+HPNQE
Sbjct: 311 GSIYPPNEGFC----PCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTGLHPNQE 366
Query: 362 DHETFVDINPLTGIILKAAKRFQINIYVKKLDDFVETGDIRTMVFPVMYLNESVHIDKET 421
H F+DI+P+TGI + + + Q+++Y+K + +TG I +V P+++ ES ++ ET
Sbjct: 367 AHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESGAMEGET 426
Query: 422 ASRL-KSMINTTLIITNIPYIIMALGVFFGLV 452
++ ++ Y+++ALG LV
Sbjct: 427 LHTFYTQLVLMPKVMHYAQYVLLALGCVLLLV 458
>gi|188536065 CD36 antigen [Homo sapiens]
Length = 472
Score = 270 bits (690), Expect = 2e-72
Identities = 152/441 (34%), Positives = 244/441 (55%), Gaps = 17/441 (3%)
Query: 33 VDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNVTNPEEILRGETP-RVEEVGPYTY 91
+ ++I+K++VL GT AF +W K VY QF+ F+V NP+E++ + +V++ GPYTY
Sbjct: 34 IQKTIKKQVVLEEGTIAFKNWVKTGTEVYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTY 93
Query: 92 R-ELRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPKIDLIRTLNIPVLTVIEWSQVH 150
R K N+ T+S + +FE SVG + D LN+ V Q
Sbjct: 94 RVRFLAKENVTQDAEDNTVSFLQPNGAIFEPSLSVGT-EADNFTVLNLAVAAASHIYQNQ 152
Query: 151 FLREIIEAMLKAYQQKLFVTHTVDELLWGYKDEILSLIHVFRPDISPYFGLFYEKNGTND 210
F++ I+ +++ + +F T+ ELLWGY+D LSL+ ++ GLFY N T D
Sbjct: 153 FVQMILNSLINKSKSSMFQVRTLRELLWGYRDPFLSLVPY---PVTTTVGLFYPYNNTAD 209
Query: 211 GDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDKCNMINGTDGDSFHPLITKDEVLYVFP 270
G Y G+D+ I + GK +L +W C+MINGTD SF P + K +VL F
Sbjct: 210 GVYKVFNGKDNISKVAIIDTYKGKRNLSYW-ESHCDMINGTDAASFPPFVEKSQVLQFFS 268
Query: 271 SDFCRSVYITFSDYESVQGLPAFRYKVPAEILAN---TSDNAGFC---IPEGNCLGSGVL 324
SD CRS+Y F +++G+P +R+ +P++ A+ DN FC I NC GVL
Sbjct: 269 SDICRSIYAVFESDVNLKGIPVYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVL 328
Query: 325 NVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQEDHETFVDINPLTGIILKAAKRFQ 384
++S CK G P+ +S PHF A I+G++PN+E+H T++DI P+TG L+ AKR Q
Sbjct: 329 DISKCKEGRPVYISLPHFLYASPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQ 388
Query: 385 INIYVKKLDDFVETGDI-RTMVFPVMYLNESVHIDKETASRLKSMINTTL-IITNIPYII 442
+N+ VK + ++ R + P+++LNE+ I E A+ +S + + ++ I I+
Sbjct: 389 VNLLVKPSEKIQVLKNLKRNYIVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMIL 448
Query: 443 MALGV--FFGLVFTWLACKGQ 461
+++GV F + ++ AC+ +
Sbjct: 449 LSVGVVMFVAFMISYCACRSK 469
>gi|188536063 CD36 antigen [Homo sapiens]
Length = 472
Score = 270 bits (690), Expect = 2e-72
Identities = 152/441 (34%), Positives = 244/441 (55%), Gaps = 17/441 (3%)
Query: 33 VDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNVTNPEEILRGETP-RVEEVGPYTY 91
+ ++I+K++VL GT AF +W K VY QF+ F+V NP+E++ + +V++ GPYTY
Sbjct: 34 IQKTIKKQVVLEEGTIAFKNWVKTGTEVYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTY 93
Query: 92 R-ELRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPKIDLIRTLNIPVLTVIEWSQVH 150
R K N+ T+S + +FE SVG + D LN+ V Q
Sbjct: 94 RVRFLAKENVTQDAEDNTVSFLQPNGAIFEPSLSVGT-EADNFTVLNLAVAAASHIYQNQ 152
Query: 151 FLREIIEAMLKAYQQKLFVTHTVDELLWGYKDEILSLIHVFRPDISPYFGLFYEKNGTND 210
F++ I+ +++ + +F T+ ELLWGY+D LSL+ ++ GLFY N T D
Sbjct: 153 FVQMILNSLINKSKSSMFQVRTLRELLWGYRDPFLSLVPY---PVTTTVGLFYPYNNTAD 209
Query: 211 GDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDKCNMINGTDGDSFHPLITKDEVLYVFP 270
G Y G+D+ I + GK +L +W C+MINGTD SF P + K +VL F
Sbjct: 210 GVYKVFNGKDNISKVAIIDTYKGKRNLSYW-ESHCDMINGTDAASFPPFVEKSQVLQFFS 268
Query: 271 SDFCRSVYITFSDYESVQGLPAFRYKVPAEILAN---TSDNAGFC---IPEGNCLGSGVL 324
SD CRS+Y F +++G+P +R+ +P++ A+ DN FC I NC GVL
Sbjct: 269 SDICRSIYAVFESDVNLKGIPVYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVL 328
Query: 325 NVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQEDHETFVDINPLTGIILKAAKRFQ 384
++S CK G P+ +S PHF A I+G++PN+E+H T++DI P+TG L+ AKR Q
Sbjct: 329 DISKCKEGRPVYISLPHFLYASPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQ 388
Query: 385 INIYVKKLDDFVETGDI-RTMVFPVMYLNESVHIDKETASRLKSMINTTL-IITNIPYII 442
+N+ VK + ++ R + P+++LNE+ I E A+ +S + + ++ I I+
Sbjct: 389 VNLLVKPSEKIQVLKNLKRNYIVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMIL 448
Query: 443 MALGV--FFGLVFTWLACKGQ 461
+++GV F + ++ AC+ +
Sbjct: 449 LSVGVVMFVAFMISYCACRSK 469
>gi|48375178 CD36 antigen [Homo sapiens]
Length = 472
Score = 270 bits (690), Expect = 2e-72
Identities = 152/441 (34%), Positives = 244/441 (55%), Gaps = 17/441 (3%)
Query: 33 VDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNVTNPEEILRGETP-RVEEVGPYTY 91
+ ++I+K++VL GT AF +W K VY QF+ F+V NP+E++ + +V++ GPYTY
Sbjct: 34 IQKTIKKQVVLEEGTIAFKNWVKTGTEVYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTY 93
Query: 92 R-ELRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPKIDLIRTLNIPVLTVIEWSQVH 150
R K N+ T+S + +FE SVG + D LN+ V Q
Sbjct: 94 RVRFLAKENVTQDAEDNTVSFLQPNGAIFEPSLSVGT-EADNFTVLNLAVAAASHIYQNQ 152
Query: 151 FLREIIEAMLKAYQQKLFVTHTVDELLWGYKDEILSLIHVFRPDISPYFGLFYEKNGTND 210
F++ I+ +++ + +F T+ ELLWGY+D LSL+ ++ GLFY N T D
Sbjct: 153 FVQMILNSLINKSKSSMFQVRTLRELLWGYRDPFLSLVPY---PVTTTVGLFYPYNNTAD 209
Query: 211 GDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDKCNMINGTDGDSFHPLITKDEVLYVFP 270
G Y G+D+ I + GK +L +W C+MINGTD SF P + K +VL F
Sbjct: 210 GVYKVFNGKDNISKVAIIDTYKGKRNLSYW-ESHCDMINGTDAASFPPFVEKSQVLQFFS 268
Query: 271 SDFCRSVYITFSDYESVQGLPAFRYKVPAEILAN---TSDNAGFC---IPEGNCLGSGVL 324
SD CRS+Y F +++G+P +R+ +P++ A+ DN FC I NC GVL
Sbjct: 269 SDICRSIYAVFESDVNLKGIPVYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVL 328
Query: 325 NVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQEDHETFVDINPLTGIILKAAKRFQ 384
++S CK G P+ +S PHF A I+G++PN+E+H T++DI P+TG L+ AKR Q
Sbjct: 329 DISKCKEGRPVYISLPHFLYASPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQ 388
Query: 385 INIYVKKLDDFVETGDI-RTMVFPVMYLNESVHIDKETASRLKSMINTTL-IITNIPYII 442
+N+ VK + ++ R + P+++LNE+ I E A+ +S + + ++ I I+
Sbjct: 389 VNLLVKPSEKIQVLKNLKRNYIVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMIL 448
Query: 443 MALGV--FFGLVFTWLACKGQ 461
+++GV F + ++ AC+ +
Sbjct: 449 LSVGVVMFVAFMISYCACRSK 469
>gi|48375176 CD36 antigen [Homo sapiens]
Length = 472
Score = 270 bits (690), Expect = 2e-72
Identities = 152/441 (34%), Positives = 244/441 (55%), Gaps = 17/441 (3%)
Query: 33 VDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNVTNPEEILRGETP-RVEEVGPYTY 91
+ ++I+K++VL GT AF +W K VY QF+ F+V NP+E++ + +V++ GPYTY
Sbjct: 34 IQKTIKKQVVLEEGTIAFKNWVKTGTEVYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTY 93
Query: 92 R-ELRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPKIDLIRTLNIPVLTVIEWSQVH 150
R K N+ T+S + +FE SVG + D LN+ V Q
Sbjct: 94 RVRFLAKENVTQDAEDNTVSFLQPNGAIFEPSLSVGT-EADNFTVLNLAVAAASHIYQNQ 152
Query: 151 FLREIIEAMLKAYQQKLFVTHTVDELLWGYKDEILSLIHVFRPDISPYFGLFYEKNGTND 210
F++ I+ +++ + +F T+ ELLWGY+D LSL+ ++ GLFY N T D
Sbjct: 153 FVQMILNSLINKSKSSMFQVRTLRELLWGYRDPFLSLVPY---PVTTTVGLFYPYNNTAD 209
Query: 211 GDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDKCNMINGTDGDSFHPLITKDEVLYVFP 270
G Y G+D+ I + GK +L +W C+MINGTD SF P + K +VL F
Sbjct: 210 GVYKVFNGKDNISKVAIIDTYKGKRNLSYW-ESHCDMINGTDAASFPPFVEKSQVLQFFS 268
Query: 271 SDFCRSVYITFSDYESVQGLPAFRYKVPAEILAN---TSDNAGFC---IPEGNCLGSGVL 324
SD CRS+Y F +++G+P +R+ +P++ A+ DN FC I NC GVL
Sbjct: 269 SDICRSIYAVFESDVNLKGIPVYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVL 328
Query: 325 NVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQEDHETFVDINPLTGIILKAAKRFQ 384
++S CK G P+ +S PHF A I+G++PN+E+H T++DI P+TG L+ AKR Q
Sbjct: 329 DISKCKEGRPVYISLPHFLYASPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQ 388
Query: 385 INIYVKKLDDFVETGDI-RTMVFPVMYLNESVHIDKETASRLKSMINTTL-IITNIPYII 442
+N+ VK + ++ R + P+++LNE+ I E A+ +S + + ++ I I+
Sbjct: 389 VNLLVKPSEKIQVLKNLKRNYIVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMIL 448
Query: 443 MALGV--FFGLVFTWLACKGQ 461
+++GV F + ++ AC+ +
Sbjct: 449 LSVGVVMFVAFMISYCACRSK 469
>gi|48375180 CD36 antigen [Homo sapiens]
Length = 472
Score = 270 bits (690), Expect = 2e-72
Identities = 152/441 (34%), Positives = 244/441 (55%), Gaps = 17/441 (3%)
Query: 33 VDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNVTNPEEILRGETP-RVEEVGPYTY 91
+ ++I+K++VL GT AF +W K VY QF+ F+V NP+E++ + +V++ GPYTY
Sbjct: 34 IQKTIKKQVVLEEGTIAFKNWVKTGTEVYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTY 93
Query: 92 R-ELRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPKIDLIRTLNIPVLTVIEWSQVH 150
R K N+ T+S + +FE SVG + D LN+ V Q
Sbjct: 94 RVRFLAKENVTQDAEDNTVSFLQPNGAIFEPSLSVGT-EADNFTVLNLAVAAASHIYQNQ 152
Query: 151 FLREIIEAMLKAYQQKLFVTHTVDELLWGYKDEILSLIHVFRPDISPYFGLFYEKNGTND 210
F++ I+ +++ + +F T+ ELLWGY+D LSL+ ++ GLFY N T D
Sbjct: 153 FVQMILNSLINKSKSSMFQVRTLRELLWGYRDPFLSLVPY---PVTTTVGLFYPYNNTAD 209
Query: 211 GDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDKCNMINGTDGDSFHPLITKDEVLYVFP 270
G Y G+D+ I + GK +L +W C+MINGTD SF P + K +VL F
Sbjct: 210 GVYKVFNGKDNISKVAIIDTYKGKRNLSYW-ESHCDMINGTDAASFPPFVEKSQVLQFFS 268
Query: 271 SDFCRSVYITFSDYESVQGLPAFRYKVPAEILAN---TSDNAGFC---IPEGNCLGSGVL 324
SD CRS+Y F +++G+P +R+ +P++ A+ DN FC I NC GVL
Sbjct: 269 SDICRSIYAVFESDVNLKGIPVYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVL 328
Query: 325 NVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQEDHETFVDINPLTGIILKAAKRFQ 384
++S CK G P+ +S PHF A I+G++PN+E+H T++DI P+TG L+ AKR Q
Sbjct: 329 DISKCKEGRPVYISLPHFLYASPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQ 388
Query: 385 INIYVKKLDDFVETGDI-RTMVFPVMYLNESVHIDKETASRLKSMINTTL-IITNIPYII 442
+N+ VK + ++ R + P+++LNE+ I E A+ +S + + ++ I I+
Sbjct: 389 VNLLVKPSEKIQVLKNLKRNYIVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMIL 448
Query: 443 MALGV--FFGLVFTWLACKGQ 461
+++GV F + ++ AC+ +
Sbjct: 449 LSVGVVMFVAFMISYCACRSK 469
>gi|217272874 coiled-coil domain containing 37 [Homo sapiens]
Length = 611
Score = 30.0 bits (66), Expect = 4.8
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 108 TISAVSNKAYVFERDQSVGDPKIDLIRTLNIPVLTVIEWSQVHFLREIIEAMLKAYQQKL 167
T + + KA VF + GD + L+ +LN VL V H EA L Q
Sbjct: 453 TAAELELKARVFHFGEYKGDQQDKLLESLNCKVLDVYR----HCTGTQQEANLGTVQMLT 508
Query: 168 FVTHTVDELL 177
+ H +DELL
Sbjct: 509 IIEHQLDELL 518
>gi|61102725 la related protein isoform 2 [Homo sapiens]
Length = 1096
Score = 29.3 bits (64), Expect = 8.2
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 17 LVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNVTN-PEEI 75
L T ++L+ A + V + +++K+ R E W PP+ Y+Q F + N PE +
Sbjct: 450 LTTDISLIFAALKDSKVVEIVDEKVRRREEPE---KWPLPPIVDYSQTDFSQLLNCPEFV 506
Query: 76 LRGETPRVEEVGP 88
R + E P
Sbjct: 507 PRQHYQKETESAP 519
>gi|39725634 la related protein isoform 1 [Homo sapiens]
Length = 1019
Score = 29.3 bits (64), Expect = 8.2
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 17 LVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNVTN-PEEI 75
L T ++L+ A + V + +++K+ R E W PP+ Y+Q F + N PE +
Sbjct: 373 LTTDISLIFAALKDSKVVEIVDEKVRRREEPE---KWPLPPIVDYSQTDFSQLLNCPEFV 429
Query: 76 LRGETPRVEEVGP 88
R + E P
Sbjct: 430 PRQHYQKETESAP 442
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,728,961
Number of Sequences: 37866
Number of extensions: 785017
Number of successful extensions: 1296
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1252
Number of HSP's gapped (non-prelim): 11
length of query: 478
length of database: 18,247,518
effective HSP length: 106
effective length of query: 372
effective length of database: 14,233,722
effective search space: 5294944584
effective search space used: 5294944584
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.