Search of human proteins with 49574508

Search of human proteins with 49574508

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|49574508 N-Acetylglucosamine kinase [Homo sapiens]
         (344 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|49574508 N-Acetylglucosamine kinase [Homo sapiens]                 697   0.0  
gi|115511012 coiled-coil domain containing 136 [Homo sapiens]          30   3.2  
gi|31543831 tubulin, gamma 1 [Homo sapiens]                            29   5.4  
gi|108773787 retinoblastoma 1 [Homo sapiens]                           29   5.4  
gi|239756633 PREDICTED: hypothetical protein [Homo sapiens]            29   5.4  
gi|239751119 PREDICTED: hypothetical protein XP_002347717 [Homo ...    29   5.4  
gi|239745610 PREDICTED: hypothetical protein XP_002344141 [Homo ...    29   5.4  
gi|55743112 NAD kinase [Homo sapiens]                                  29   5.4  
gi|7706751 tubulin, gamma 2 [Homo sapiens]                             29   5.4  

>gi|49574508 N-Acetylglucosamine kinase [Homo sapiens]
          Length = 344

 Score =  697 bits (1799), Expect = 0.0
 Identities = 344/344 (100%), Positives = 344/344 (100%)

Query: 1   MAAIYGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKA 60
           MAAIYGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKA
Sbjct: 1   MAAIYGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKA 60

Query: 61  GVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGG 120
           GVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGG
Sbjct: 61  GVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGG 120

Query: 121 VVLISGTGSNCRLINPDGSESGCGGWGHMMGDEGSAYWIAHQAVKIVFDSIDNLEAAPHD 180
           VVLISGTGSNCRLINPDGSESGCGGWGHMMGDEGSAYWIAHQAVKIVFDSIDNLEAAPHD
Sbjct: 121 VVLISGTGSNCRLINPDGSESGCGGWGHMMGDEGSAYWIAHQAVKIVFDSIDNLEAAPHD 180

Query: 181 IGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEGAQQGDPLSRYIFRKAGE 240
           IGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEGAQQGDPLSRYIFRKAGE
Sbjct: 181 IGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEGAQQGDPLSRYIFRKAGE 240

Query: 241 MLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFS 300
           MLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFS
Sbjct: 241 MLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFS 300

Query: 301 SFTLMKLRHSSALGGASLGARHIGHLLPMDYSANAIAFYSYTFS 344
           SFTLMKLRHSSALGGASLGARHIGHLLPMDYSANAIAFYSYTFS
Sbjct: 301 SFTLMKLRHSSALGGASLGARHIGHLLPMDYSANAIAFYSYTFS 344


>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
          Length = 1154

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%)

Query: 67  PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPD 118
           P  SLGLS   G QE+     ++ELR+R+ +L+E Y    ++  S+     D
Sbjct: 210 PSGSLGLSDYSGLQEE-----LQELRERYHFLNEEYRALQESNSSLTGQLAD 256


>gi|31543831 tubulin, gamma 1 [Homo sapiens]
          Length = 451

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)

Query: 19  LVSEDGKILAEADGLSTNHWLIGT---DKCVERINEMVNRAKRKAGVDPLVPLRSLGLSL 75
           L + +   L+E  G + N+W  G    +K  E I ++++R     G D L     L  S+
Sbjct: 85  LYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFDIIDR--EADGSDSLEGF-VLCHSI 141

Query: 76  SGGDQEDAGRILIEELRDRFP 96
           +GG     G  L+E L DR+P
Sbjct: 142 AGGTGSGLGSYLLERLNDRYP 162


>gi|108773787 retinoblastoma 1 [Homo sapiens]
          Length = 928

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%)

Query: 41  GTDKCVERINEMVNRA----KRKA-GVDPLVPLRSLGLSLSGGDQEDAGRIL 87
           GT +  ++IN+MV  +    KR A G +P  PL+ L   + G D+ D  + L
Sbjct: 840 GTSEKFQKINQMVCNSDRVLKRSAEGSNPPKPLKKLRFDIEGSDEADGSKHL 891


>gi|239756633 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 121

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 6/43 (13%)

Query: 109 AGSIATATPDGGVVLISGTGSNCRLIN------PDGSESGCGG 145
           AG  ++A P G V L+ G G+ C  ++      P G  +GC G
Sbjct: 14  AGVPSSALPQGPVSLLPGAGALCPCVDQESASKPAGQSAGCSG 56


>gi|239751119 PREDICTED: hypothetical protein XP_002347717 [Homo
           sapiens]
          Length = 121

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 6/43 (13%)

Query: 109 AGSIATATPDGGVVLISGTGSNCRLIN------PDGSESGCGG 145
           AG  ++A P G V L+ G G+ C  ++      P G  +GC G
Sbjct: 14  AGVPSSALPQGPVSLLPGAGALCPCVDQESASKPAGQSAGCSG 56


>gi|239745610 PREDICTED: hypothetical protein XP_002344141 [Homo
           sapiens]
          Length = 121

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 6/43 (13%)

Query: 109 AGSIATATPDGGVVLISGTGSNCRLIN------PDGSESGCGG 145
           AG  ++A P G V L+ G G+ C  ++      P G  +GC G
Sbjct: 14  AGVPSSALPQGPVSLLPGAGALCPCVDQESASKPAGQSAGCSG 56


>gi|55743112 NAD kinase [Homo sapiens]
          Length = 446

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 10/77 (12%)

Query: 69  RSLGLSLSGGDQEDAGRILIEELRDRFP--YLS------ESYLITTDAAGSIATATPDGG 120
           ++ GL +  G Q    ++L E + DR P  YLS      + +LITT     +  +TP G 
Sbjct: 265 QAAGLDMDVGKQAMQYQVLNEVVIDRGPSSYLSNVDVYLDGHLITTVQGDGVIVSTPTGS 324

Query: 121 VVLISGTGSNCRLINPD 137
               +  G++  +I+P+
Sbjct: 325 TAYAAAAGAS--MIHPN 339


>gi|7706751 tubulin, gamma 2 [Homo sapiens]
          Length = 451

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)

Query: 19  LVSEDGKILAEADGLSTNHWLIGT---DKCVERINEMVNRAKRKAGVDPLVPLRSLGLSL 75
           L + +   L+E  G + N+W  G    +K  E I ++++R     G D L     L  S+
Sbjct: 85  LYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFDIIDR--EADGSDSLEGF-VLCHSI 141

Query: 76  SGGDQEDAGRILIEELRDRFP 96
           +GG     G  L+E L DR+P
Sbjct: 142 AGGTGSGLGSYLLERLNDRYP 162


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.140    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,204,692
Number of Sequences: 37866
Number of extensions: 586924
Number of successful extensions: 1417
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1416
Number of HSP's gapped (non-prelim): 9
length of query: 344
length of database: 18,247,518
effective HSP length: 103
effective length of query: 241
effective length of database: 14,347,320
effective search space: 3457704120
effective search space used: 3457704120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.