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Search of human proteins with 48255966
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|48255966 UDP-glucose pyrophosphorylase 2 isoform a [Homo
sapiens]
(508 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|48255966 UDP-glucose pyrophosphorylase 2 isoform a [Homo sapi... 1007 0.0
gi|48255968 UDP-glucose pyrophosphorylase 2 isoform b [Homo sapi... 987 0.0
gi|156627575 UDP-N-acetylglucosamine pyrophosphorylase 1 [Homo s... 57 4e-08
gi|187936958 UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 ... 49 1e-05
gi|24415404 MDN1, midasin homolog [Homo sapiens] 33 0.47
gi|5729840 tubulin, gamma complex associated protein 2 [Homo sap... 32 1.8
gi|70778918 inter-alpha globulin inhibitor H2 polypeptide [Homo ... 30 4.0
gi|157412259 notch1-induced protein isoform a [Homo sapiens] 30 5.2
gi|157671913 notch1-induced protein isoform b [Homo sapiens] 30 5.2
gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens] 30 5.2
gi|4503617 exostoses-like 3 [Homo sapiens] 30 6.8
gi|16751843 toll-like receptor 5 [Homo sapiens] 29 8.8
gi|239755534 PREDICTED: doublecortin domain containing 5 [Homo s... 29 8.8
gi|239750000 PREDICTED: doublecortin domain containing 5 [Homo s... 29 8.8
gi|239744311 PREDICTED: doublecortin domain containing 5 [Homo s... 29 8.8
gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo sap... 29 8.8
gi|5453746 5,10-methenyltetrahydrofolate synthetase (5-formyltet... 29 8.8
>gi|48255966 UDP-glucose pyrophosphorylase 2 isoform a [Homo
sapiens]
Length = 508
Score = 1007 bits (2604), Expect = 0.0
Identities = 508/508 (100%), Positives = 508/508 (100%)
Query: 1 MSRFVQDLSKAMSQDGASQFQEVIRQELELSVKKELEKILTTASSHEFEHTKKDLDGFRK 60
MSRFVQDLSKAMSQDGASQFQEVIRQELELSVKKELEKILTTASSHEFEHTKKDLDGFRK
Sbjct: 1 MSRFVQDLSKAMSQDGASQFQEVIRQELELSVKKELEKILTTASSHEFEHTKKDLDGFRK 60
Query: 61 LFHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIKARGLPDNISSVLNKLVVVKLNGGLGTS 120
LFHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIKARGLPDNISSVLNKLVVVKLNGGLGTS
Sbjct: 61 LFHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIKARGLPDNISSVLNKLVVVKLNGGLGTS 120
Query: 121 MGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNH 180
MGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNH
Sbjct: 121 MGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNH 180
Query: 181 CRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFI 240
CRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFI
Sbjct: 181 CRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFI 240
Query: 241 GEGKEYIFVSNIDNLGATVDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEG 300
GEGKEYIFVSNIDNLGATVDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEG
Sbjct: 241 GEGKEYIFVSNIDNLGATVDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEG 300
Query: 301 KLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLD 360
KLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLD
Sbjct: 301 KLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLD 360
Query: 361 GGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSE 420
GGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSE
Sbjct: 361 GGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSE 420
Query: 421 KREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIA 480
KREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIA
Sbjct: 421 KREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIA 480
Query: 481 NHGDRIDIPPGAVLENKIVSGNLRILDH 508
NHGDRIDIPPGAVLENKIVSGNLRILDH
Sbjct: 481 NHGDRIDIPPGAVLENKIVSGNLRILDH 508
>gi|48255968 UDP-glucose pyrophosphorylase 2 isoform b [Homo
sapiens]
Length = 497
Score = 987 bits (2552), Expect = 0.0
Identities = 497/497 (100%), Positives = 497/497 (100%)
Query: 12 MSQDGASQFQEVIRQELELSVKKELEKILTTASSHEFEHTKKDLDGFRKLFHRFLQEKGP 71
MSQDGASQFQEVIRQELELSVKKELEKILTTASSHEFEHTKKDLDGFRKLFHRFLQEKGP
Sbjct: 1 MSQDGASQFQEVIRQELELSVKKELEKILTTASSHEFEHTKKDLDGFRKLFHRFLQEKGP 60
Query: 72 SVDWGKIQRPPEDSIQPYEKIKARGLPDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIG 131
SVDWGKIQRPPEDSIQPYEKIKARGLPDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIG
Sbjct: 61 SVDWGKIQRPPEDSIQPYEKIKARGLPDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIG 120
Query: 132 VRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQS 191
VRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQS
Sbjct: 121 VRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQS 180
Query: 192 RYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSN 251
RYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSN
Sbjct: 181 RYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSN 240
Query: 252 IDNLGATVDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVP 311
IDNLGATVDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVP
Sbjct: 241 IDNLGATVDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVP 300
Query: 312 KAHVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETA 371
KAHVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETA
Sbjct: 301 KAHVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETA 360
Query: 372 VGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVK 431
VGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVK
Sbjct: 361 VGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVK 420
Query: 432 LGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPG 491
LGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPG
Sbjct: 421 LGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPG 480
Query: 492 AVLENKIVSGNLRILDH 508
AVLENKIVSGNLRILDH
Sbjct: 481 AVLENKIVSGNLRILDH 497
>gi|156627575 UDP-N-acetylglucosamine pyrophosphorylase 1 [Homo
sapiens]
Length = 505
Score = 57.0 bits (136), Expect = 4e-08
Identities = 78/345 (22%), Positives = 142/345 (41%), Gaps = 36/345 (10%)
Query: 5 VQDLSKAMSQDGASQFQEVIRQELELSVKKELEKILTTASSHEFEHT-KKDLDGFRKLFH 63
+ DL +S+ G ELE + + EL L + E +K ++GF + H
Sbjct: 3 INDLKLTLSKAGQEHLLR-FWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSH 61
Query: 64 R----FLQEKGPSVDWGKIQRPPEDSIQPYEKIKARGLPDNISSVLNKLVVVKLNGGLGT 119
+ E P G R +D +Q +E + GL NK+ V+ L GG GT
Sbjct: 62 QKNVDARMEPVPREVLGSATRD-QDQLQAWE---SEGL---FQISQNKVAVLLLAGGQGT 114
Query: 120 SMGCKGPKSL--IGVRNENTFLDLTVQQIEHL----NKTYNTD--VPLVLMNSFNTDEDT 171
+G PK + +G+ + T + ++I L K Y +P +M S T E T
Sbjct: 115 RLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMEST 174
Query: 172 KKILQKYNHCRVK---IYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYA 228
K+ K+ + +K + F Q P ++ + + + + +N + P G+G +Y
Sbjct: 175 KEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEE------KNKVSMAPDGNGGLYR 228
Query: 229 SFYNSGLLDTFIGEGKEYIFVSNIDNLGATV-DLYILNHLMNPPNGKRCEFVMEVTNKTR 287
+ +++ G I V +DN+ V D + + K + +V KT
Sbjct: 229 ALAAQNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQ----KGADCGAKVVEKTN 284
Query: 288 ADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNL 332
G + + +G ++VE +++ A + S + +FN N+
Sbjct: 285 PTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRL-LFNAGNI 328
>gi|187936958 UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
[Homo sapiens]
Length = 507
Score = 48.5 bits (114), Expect = 1e-05
Identities = 53/246 (21%), Positives = 100/246 (40%), Gaps = 35/246 (14%)
Query: 105 LNKLVVVKLNGGLGTSMGCKGPKSL--IGVRNENTFLDLTVQQIEHLNKT------YNTD 156
LNK+ V+ L GG GT +G PK + +G+ + T L ++I + +
Sbjct: 103 LNKVAVLLLAGGQGTRLGVTYPKGMYRVGLPSRKTLYQLQAERIRRVEQLAGERHGTRCT 162
Query: 157 VPLVLMNSFNTDEDTKKILQKYNHCRV---KIYTFNQSRYPRINKESLLPVAKDVSYSGE 213
VP +M S T T + +++N + + F Q P + + V +
Sbjct: 163 VPWYVMTSEFTLGPTAEFFREHNFFHLDPANVVMFEQRLLPAVTFDG------KVILERK 216
Query: 214 NTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVDLYILNHLMNPP-- 271
+ A P G+G +Y + + +L+ G E++ V +DN IL L +P
Sbjct: 217 DKVAMAPDGNGGLYCALEDHKILEDMERRGVEFVHVYCVDN--------ILVRLADPVFI 268
Query: 272 -----NGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKSVSKFKI 326
G C +V K + G + Q +G ++VE +++ + ++ +
Sbjct: 269 GFCVLQGADCG--AKVVEKAYPEEPVGVVCQVDGVPQVVEYSEI-SPETAQLRASDGSLL 325
Query: 327 FNTNNL 332
+N N+
Sbjct: 326 YNAGNI 331
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 33.5 bits (75), Expect = 0.47
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 221 PGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVDLYILNHLMNPPNGKRCEFVM 280
P HGDI + N GL GEG S DNL DL +L H + C+ ++
Sbjct: 2294 PVHGDISRAMRNRGLEIYISGEGD----ASTPDNL----DLKVLLHSLGLVGNSVCDILL 2345
Query: 281 EVTNKTRADVKG 292
+ +TR+ V G
Sbjct: 2346 ALHTETRSTVVG 2357
>gi|5729840 tubulin, gamma complex associated protein 2 [Homo
sapiens]
Length = 902
Score = 31.6 bits (70), Expect = 1.8
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 14/129 (10%)
Query: 260 DLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFK 319
D+ L L+ G E +++ K R T++ + K+++ E ++ P+ D K
Sbjct: 9 DVNELLSLLRVHGGDGAEVYIDLLQKNRTPYVTTTVSAHSAKVKIAEFSRTPE---DFLK 65
Query: 320 SVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSF 379
+ K NT NL + + +L E + NAK E A AA
Sbjct: 66 KYDELKSKNTRNLDPLVYLLSKLTEDKETLQYLQQNAK-----------ERAELAAAAVG 114
Query: 380 ENSLGINVP 388
++ INVP
Sbjct: 115 SSTTSINVP 123
>gi|70778918 inter-alpha globulin inhibitor H2 polypeptide [Homo
sapiens]
Length = 946
Score = 30.4 bits (67), Expect = 4.0
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 18 SQFQEVIRQELELSVKKELEKILTTASSHEFEHTKKDLDGFRKLFHRFLQEKGPSVDWGK 77
S +V Q +++SVKKE K++T E F L HR ++ +VD+
Sbjct: 794 SDTAQVTNQRVQISVKKE--KVVTITLDKEMS--------FSVLLHRVWKKHPVNVDFLG 843
Query: 78 IQRPPEDSIQPYEKIKARGL 97
I PP + P KA GL
Sbjct: 844 IYIPPTNKFSP----KAHGL 859
>gi|157412259 notch1-induced protein isoform a [Homo sapiens]
Length = 451
Score = 30.0 bits (66), Expect = 5.2
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 115 GGLGTSMGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKI 174
GG G MG PK + E + T+Q +E + + V + N E K I
Sbjct: 54 GGCGERMGVPTPKQFCPIL-ERPLISYTLQALERVCWIKDIVVAVTGENM----EVMKSI 108
Query: 175 LQKYNHCRVKIYTFNQSRYPRI 196
+QKY H R+ + +R+ I
Sbjct: 109 IQKYQHKRISLVEAGVTRHRSI 130
>gi|157671913 notch1-induced protein isoform b [Homo sapiens]
Length = 401
Score = 30.0 bits (66), Expect = 5.2
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 115 GGLGTSMGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKI 174
GG G MG PK + E + T+Q +E + + V + N E K I
Sbjct: 54 GGCGERMGVPTPKQFCPIL-ERPLISYTLQALERVCWIKDIVVAVTGENM----EVMKSI 108
Query: 175 LQKYNHCRVKIYTFNQSRYPRI 196
+QKY H R+ + +R+ I
Sbjct: 109 IQKYQHKRISLVEAGVTRHRSI 130
>gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens]
Length = 1796
Score = 30.0 bits (66), Expect = 5.2
Identities = 26/87 (29%), Positives = 32/87 (36%), Gaps = 18/87 (20%)
Query: 130 IGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFN 189
IG N N + + LNK TD V M F D T+ L Y
Sbjct: 1043 IGDENFNKIISFLYSTVGALNKI-GTDGTQVAMVQFTDDPRTEFKLNAYK---------- 1091
Query: 190 QSRYPRINKESLLPVAKDVSYSGENTE 216
KE+LL K +SY G NT+
Sbjct: 1092 -------TKETLLDAIKHISYKGGNTK 1111
>gi|4503617 exostoses-like 3 [Homo sapiens]
Length = 919
Score = 29.6 bits (65), Expect = 6.8
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 356 AKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSN 407
AK L G + G + K F+ +LG NVPR +F V T + V+ N
Sbjct: 627 AKFLGSGTGFRPIGGGAGGSGKEFQAALGGNVPREQFTVVMLTYEREEVLMN 678
>gi|16751843 toll-like receptor 5 [Homo sapiens]
Length = 858
Score = 29.3 bits (64), Expect = 8.8
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 16/117 (13%)
Query: 72 SVDWGKIQRPPEDSIQPYEKIKARG----LPDNISSVLNK---LVVVKLNGGLGTSMGCK 124
SVDWGK P + + + G + N S+ ++K ++ + +G G
Sbjct: 213 SVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 272
Query: 125 GPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNS--FNTDEDTKKILQKYN 179
K ++NTF L + HL+ ++ + +NS F T +D K + YN
Sbjct: 273 NIKD----PDQNTFAGLARSSVRHLDLSHGF---VFSLNSRVFETLKDLKVLNLAYN 322
>gi|239755534 PREDICTED: doublecortin domain containing 5 [Homo
sapiens]
Length = 1020
Score = 29.3 bits (64), Expect = 8.8
Identities = 37/192 (19%), Positives = 82/192 (42%), Gaps = 18/192 (9%)
Query: 260 DLYILNHLMNPPNGKR---CEFVMEVTNKTRAD---VKGGTLTQYEGKLRLVEIAQVPKA 313
DL + H M G+R C+ V K+ V+GG Q + +++L+E+ + +A
Sbjct: 810 DLDTMRHKMRQLKGRRVAACQPATMVPTKSPVQPVVVEGGWTEQTQQEIKLMELIRHTEA 869
Query: 314 HVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVN-AKTLDG----GLNVIQL 368
H+ E + + F I++ ++ N + I +N + DG G + +L
Sbjct: 870 HLSEIQEMESKINFPIATKRIAVKPSNLYKQPNTKRVWIYLNGGRPEDGTYAWGKTISEL 929
Query: 369 ETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVP 428
+ +K + + P P+++ D+ M S+ G T E ++
Sbjct: 930 LQDCSSRLKMTHPARALYTPSGE--PIQSWDDIERDMVICVSMGHGFKTPKELKQ----- 982
Query: 429 LVKLGSSFTKVQ 440
L+++ +++ +++
Sbjct: 983 LMEIRANYARIR 994
>gi|239750000 PREDICTED: doublecortin domain containing 5 [Homo
sapiens]
Length = 1020
Score = 29.3 bits (64), Expect = 8.8
Identities = 37/192 (19%), Positives = 82/192 (42%), Gaps = 18/192 (9%)
Query: 260 DLYILNHLMNPPNGKR---CEFVMEVTNKTRAD---VKGGTLTQYEGKLRLVEIAQVPKA 313
DL + H M G+R C+ V K+ V+GG Q + +++L+E+ + +A
Sbjct: 810 DLDTMRHKMRQLKGRRVAACQPATMVPTKSPVQPVVVEGGWTEQTQQEIKLMELIRHTEA 869
Query: 314 HVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVN-AKTLDG----GLNVIQL 368
H+ E + + F I++ ++ N + I +N + DG G + +L
Sbjct: 870 HLSEIQEMESKINFPIATKRIAVKPSNLYKQPNTKRVWIYLNGGRPEDGTYAWGKTISEL 929
Query: 369 ETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVP 428
+ +K + + P P+++ D+ M S+ G T E ++
Sbjct: 930 LQDCSSRLKMTHPARALYTPSGE--PIQSWDDIERDMVICVSMGHGFKTPKELKQ----- 982
Query: 429 LVKLGSSFTKVQ 440
L+++ +++ +++
Sbjct: 983 LMEIRANYARIR 994
>gi|239744311 PREDICTED: doublecortin domain containing 5 [Homo
sapiens]
Length = 1020
Score = 29.3 bits (64), Expect = 8.8
Identities = 37/192 (19%), Positives = 82/192 (42%), Gaps = 18/192 (9%)
Query: 260 DLYILNHLMNPPNGKR---CEFVMEVTNKTRAD---VKGGTLTQYEGKLRLVEIAQVPKA 313
DL + H M G+R C+ V K+ V+GG Q + +++L+E+ + +A
Sbjct: 810 DLDTMRHKMRQLKGRRVAACQPATMVPTKSPVQPVVVEGGWTEQTQQEIKLMELIRHTEA 869
Query: 314 HVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVN-AKTLDG----GLNVIQL 368
H+ E + + F I++ ++ N + I +N + DG G + +L
Sbjct: 870 HLSEIQEMESKINFPIATKRIAVKPSNLYKQPNTKRVWIYLNGGRPEDGTYAWGKTISEL 929
Query: 369 ETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVP 428
+ +K + + P P+++ D+ M S+ G T E ++
Sbjct: 930 LQDCSSRLKMTHPARALYTPSGE--PIQSWDDIERDMVICVSMGHGFKTPKELKQ----- 982
Query: 429 LVKLGSSFTKVQ 440
L+++ +++ +++
Sbjct: 983 LMEIRANYARIR 994
>gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo
sapiens]
Length = 2211
Score = 29.3 bits (64), Expect = 8.8
Identities = 45/187 (24%), Positives = 71/187 (37%), Gaps = 23/187 (12%)
Query: 52 KKDLDGFRKLFHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIKARGLPDNISSVLNKLVVV 111
KKD+D F L+ L D G+++ + + YE + A G + N + +
Sbjct: 10 KKDID-FLALYEAELLNYASEDDEGELEHEYYKA-RVYEVVTATGDVRGAGTDANVFITL 67
Query: 112 KLNGGLGTSMGC---------KGPKSLIGVRNENTFLDLTVQQIEH----LNKTYNTDVP 158
GL + KG + VR N L V+ IEH LN ++ D
Sbjct: 68 FGENGLSPKLQLTSKSKSAFEKGNVDVFRVRTNNVGLIYKVR-IEHDNTGLNASWYLDHV 126
Query: 159 LV-------LMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLLPVAKDVSYS 211
+V L FN + K+ CR + +FN PR NK + DV +
Sbjct: 127 IVTDMKRPHLRYYFNCNNWLSKVEGDRQWCRDLLASFNPMDMPRGNKYEVKVYTGDVIGA 186
Query: 212 GENTEAW 218
G + + +
Sbjct: 187 GTDADVF 193
>gi|5453746 5,10-methenyltetrahydrofolate synthetase
(5-formyltetrahydrofolate cyclo-ligase) [Homo sapiens]
Length = 203
Score = 29.3 bits (64), Expect = 8.8
Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Query: 151 KTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLLPVAKDVSY 210
K+ + L + + T+E K I Q+ C + Y F + + ES +++S
Sbjct: 48 KSKRISIFLSMQDEIETEEIIKDIFQRGKICFIPRYRFQSNHMDMVRIES----PEEISL 103
Query: 211 SGENTEAWYPPGHGDIYASFYNSGLLDTFIGEG 243
+ + PG GD+ ++G LD G
Sbjct: 104 LPKTSWNIPQPGEGDVREEALSTGGLDLIFMPG 136
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,360,873
Number of Sequences: 37866
Number of extensions: 783453
Number of successful extensions: 1973
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1966
Number of HSP's gapped (non-prelim): 18
length of query: 508
length of database: 18,247,518
effective HSP length: 107
effective length of query: 401
effective length of database: 14,195,856
effective search space: 5692538256
effective search space used: 5692538256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.