Search of human proteins with 48255933

Search of human proteins with 48255933

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|48255933 high-mobility group nucleosome binding domain 1
[Homo sapiens]
         (100 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|48255933 high-mobility group nucleosome binding domain 1 [Hom...   195   7e-51
gi|239757062 PREDICTED: similar to hCG1979072 [Homo sapiens]          173   2e-44
gi|239751572 PREDICTED: similar to hCG1979072 [Homo sapiens]          173   2e-44
gi|239746084 PREDICTED: similar to hCG1979072 [Homo sapiens]          173   2e-44
gi|239757066 PREDICTED: hypothetical protein [Homo sapiens]           130   2e-31
gi|239751576 PREDICTED: hypothetical protein [Homo sapiens]           130   2e-31
gi|239746088 PREDICTED: hypothetical protein [Homo sapiens]           130   2e-31
gi|20270186 high mobility group nucleosomal binding domain 3 iso...    70   5e-13
gi|5031749 high-mobility group nucleosomal binding domain 2 [Hom...    67   2e-12
gi|169165669 PREDICTED: similar to high-mobility group nucleosom...    62   7e-11
gi|113415254 PREDICTED: similar to high-mobility group nucleosom...    62   7e-11
gi|113414676 PREDICTED: similar to high-mobility group nucleosom...    62   7e-11
gi|169165461 PREDICTED: hypothetical protein [Homo sapiens]            61   2e-10
gi|169165899 PREDICTED: hypothetical protein [Homo sapiens]            61   2e-10
gi|169165087 PREDICTED: hypothetical protein [Homo sapiens]            61   2e-10
gi|13540523 nucleosomal binding protein 1 [Homo sapiens]               61   2e-10
gi|169209024 PREDICTED: similar to high-mobility group nucleosom...    60   5e-10
gi|113425750 PREDICTED: similar to high-mobility group nucleosom...    60   5e-10
gi|113425298 PREDICTED: similar to high-mobility group nucleosom...    60   5e-10
gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]           58   1e-09
gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]           58   1e-09
gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]           58   1e-09
gi|239755359 PREDICTED: similar to hCG2040565 [Homo sapiens]           58   2e-09
gi|239749851 PREDICTED: similar to hCG2040565 [Homo sapiens]           58   2e-09
gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo ...    58   2e-09
gi|169202834 PREDICTED: hypothetical protein [Homo sapiens]            57   2e-09
gi|89034591 PREDICTED: hypothetical protein [Homo sapiens]             57   2e-09
gi|89033815 PREDICTED: hypothetical protein [Homo sapiens]             57   2e-09
gi|239753184 PREDICTED: similar to hCG2040565 [Homo sapiens]           56   7e-09
gi|239747758 PREDICTED: hypothetical protein XP_002348261 [Homo ...    56   7e-09

>gi|48255933 high-mobility group nucleosome binding domain 1 [Homo
           sapiens]
          Length = 100

 Score =  195 bits (495), Expect = 7e-51
 Identities = 100/100 (100%), Positives = 100/100 (100%)

Query: 1   MPKRKVSSAEGAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKG 60
           MPKRKVSSAEGAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKG
Sbjct: 1   MPKRKVSSAEGAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKG 60

Query: 61  KQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAKSD 100
           KQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAKSD
Sbjct: 61  KQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAKSD 100


>gi|239757062 PREDICTED: similar to hCG1979072 [Homo sapiens]
          Length = 121

 Score =  173 bits (439), Expect = 2e-44
 Identities = 88/90 (97%), Positives = 88/90 (97%)

Query: 11  GAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQAEVANQET 70
           G AKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQ EVANQET
Sbjct: 32  GGAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQET 91

Query: 71  KEDLPAENGETKTEESPASDEAGEKEAKSD 100
           KEDLPAENGETKTEESPASDEAGEKEAKSD
Sbjct: 92  KEDLPAENGETKTEESPASDEAGEKEAKSD 121


>gi|239751572 PREDICTED: similar to hCG1979072 [Homo sapiens]
          Length = 121

 Score =  173 bits (439), Expect = 2e-44
 Identities = 88/90 (97%), Positives = 88/90 (97%)

Query: 11  GAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQAEVANQET 70
           G AKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQ EVANQET
Sbjct: 32  GGAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQET 91

Query: 71  KEDLPAENGETKTEESPASDEAGEKEAKSD 100
           KEDLPAENGETKTEESPASDEAGEKEAKSD
Sbjct: 92  KEDLPAENGETKTEESPASDEAGEKEAKSD 121


>gi|239746084 PREDICTED: similar to hCG1979072 [Homo sapiens]
          Length = 121

 Score =  173 bits (439), Expect = 2e-44
 Identities = 88/90 (97%), Positives = 88/90 (97%)

Query: 11  GAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQAEVANQET 70
           G AKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQ EVANQET
Sbjct: 32  GGAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQTEVANQET 91

Query: 71  KEDLPAENGETKTEESPASDEAGEKEAKSD 100
           KEDLPAENGETKTEESPASDEAGEKEAKSD
Sbjct: 92  KEDLPAENGETKTEESPASDEAGEKEAKSD 121


>gi|239757066 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 116

 Score =  130 bits (328), Expect = 2e-31
 Identities = 71/101 (70%), Positives = 80/101 (79%), Gaps = 2/101 (1%)

Query: 1   MPKRKVSSAEGAAKEEPKRRSARLSAKPPA-KVEAKPKKAAAKDKSSDKKVQTKGKR-GA 58
           +PKR VSSAE   KEEPKR SARLS KP A KVE KPK    ++KSSDKKVQTKGK+ GA
Sbjct: 15  VPKRMVSSAEEVVKEEPKRTSARLSVKPAAAKVEMKPKMKTGENKSSDKKVQTKGKKNGA 74

Query: 59  KGKQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAKS 99
           KG+Q ++ANQETKED PAEN + KTEE+PA DE  EKEAKS
Sbjct: 75  KGEQGDMANQETKEDRPAENSDMKTEENPAFDEMREKEAKS 115


>gi|239751576 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 116

 Score =  130 bits (327), Expect = 2e-31
 Identities = 71/101 (70%), Positives = 80/101 (79%), Gaps = 2/101 (1%)

Query: 1   MPKRKVSSAEGAAKEEPKRRSARLSAKPPA-KVEAKPKKAAAKDKSSDKKVQTKGKR-GA 58
           +PKR VSSAE   KEEPKR SARLS KP A KVE KPK    ++KSSDKKVQTKGK+ GA
Sbjct: 15  VPKRMVSSAEEVVKEEPKRTSARLSVKPAAAKVEMKPKMKTRENKSSDKKVQTKGKKNGA 74

Query: 59  KGKQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAKS 99
           KG+Q ++ANQETKED PAEN + KTEE+PA DE  EKEAKS
Sbjct: 75  KGEQGDMANQETKEDRPAENSDMKTEENPAFDEMREKEAKS 115


>gi|239746088 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 116

 Score =  130 bits (327), Expect = 2e-31
 Identities = 71/101 (70%), Positives = 80/101 (79%), Gaps = 2/101 (1%)

Query: 1   MPKRKVSSAEGAAKEEPKRRSARLSAKPPA-KVEAKPKKAAAKDKSSDKKVQTKGKR-GA 58
           +PKR VSSAE   KEEPKR SARLS KP A KVE KPK    ++KSSDKKVQTKGK+ GA
Sbjct: 15  VPKRMVSSAEEVVKEEPKRTSARLSVKPAAAKVEMKPKMKTRENKSSDKKVQTKGKKNGA 74

Query: 59  KGKQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAKS 99
           KG+Q ++ANQETKED PAEN + KTEE+PA DE  EKEAKS
Sbjct: 75  KGEQGDMANQETKEDRPAENSDMKTEENPAFDEMREKEAKS 115


>gi|20270186 high mobility group nucleosomal binding domain 3
          isoform HMGN3a [Homo sapiens]
          Length = 99

 Score = 69.7 bits (169), Expect = 5e-13
 Identities = 46/97 (47%), Positives = 57/97 (58%), Gaps = 12/97 (12%)

Query: 1  MPKRKV-SSAEG-----AAKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTK 53
          MPKRK   + EG       K+EP RRSARLSAKP P K E KP+K +AK     K+   K
Sbjct: 1  MPKRKSPENTEGKDGSKVTKQEPTRRSARLSAKPAPPKPEPKPRKTSAK-----KEPGAK 55

Query: 54 GKRGAKGKQAEVANQETKEDLPAENGETKTEESPASD 90
            RGAKGK+ E      +   P+ENGETK EE+  ++
Sbjct: 56 ISRGAKGKKEEKQEAGKEGTAPSENGETKAEEAQKTE 92


>gi|5031749 high-mobility group nucleosomal binding domain 2 [Homo
          sapiens]
          Length = 90

 Score = 67.4 bits (163), Expect = 2e-12
 Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 22/102 (21%)

Query: 1  MPKRKVSSAEGAAK-------EEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQT 52
          MPKRK   AEG AK       +EP+RRSARLSAKP P K E KPKKA AK          
Sbjct: 1  MPKRK---AEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAK---------- 47

Query: 53 KGKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
          KG++  KGK+ + A+   + + PAENG+ KT+++  ++ AG+
Sbjct: 48 KGEKVPKGKKGK-ADAGKEGNNPAENGDAKTDQAQKAEGAGD 88


>gi|169165669 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score = 62.4 bits (150), Expect = 7e-11
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 16/99 (16%)

Query: 1  MPKRKVSSA----EGAAKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGK 55
          MPKRK        +   K+EP+RRS RLSAKP P K E KPKKA AK          KG+
Sbjct: 1  MPKRKAEGDTKRDKAKVKDEPQRRSVRLSAKPAPPKPEPKPKKAPAK----------KGE 50

Query: 56 RGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
          +  KGK+ + A+   + + PAENG  KT+++  ++  G+
Sbjct: 51 KVPKGKKGK-ADAGEEGNNPAENGVAKTDQAQKAESPGD 88


>gi|113415254 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score = 62.4 bits (150), Expect = 7e-11
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 16/99 (16%)

Query: 1  MPKRKVSSA----EGAAKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGK 55
          MPKRK        +   K+EP+RRS RLSAKP P K E KPKKA AK          KG+
Sbjct: 1  MPKRKAEGDTKRDKAKVKDEPQRRSVRLSAKPAPPKPEPKPKKAPAK----------KGE 50

Query: 56 RGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
          +  KGK+ + A+   + + PAENG  KT+++  ++  G+
Sbjct: 51 KVPKGKKGK-ADAGEEGNNPAENGVAKTDQAQKAESPGD 88


>gi|113414676 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score = 62.4 bits (150), Expect = 7e-11
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 16/99 (16%)

Query: 1  MPKRKVSSA----EGAAKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGK 55
          MPKRK        +   K+EP+RRS RLSAKP P K E KPKKA AK          KG+
Sbjct: 1  MPKRKAEGDTKRDKAKVKDEPQRRSVRLSAKPAPPKPEPKPKKAPAK----------KGE 50

Query: 56 RGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
          +  KGK+ + A+   + + PAENG  KT+++  ++  G+
Sbjct: 51 KVPKGKKGK-ADAGEEGNNPAENGVAKTDQAQKAESPGD 88


>gi|169165461 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 61.2 bits (147), Expect = 2e-10
 Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 22/101 (21%)

Query: 1   MPKRKVSSAEGAAK-------EEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQT 52
           +PKRK   AEG AK       +EP+RRS R SAKP P K E KPKKA AK          
Sbjct: 51  VPKRK---AEGDAKGDKAKVKDEPQRRSMRFSAKPAPPKPEPKPKKAPAK---------- 97

Query: 53  KGKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAG 93
           KG++  KGK+ + A+   + + PAENG+ KT+++  ++ AG
Sbjct: 98  KGEKIPKGKKGK-ADAGEEGNNPAENGDAKTDQAQKAEGAG 137


>gi|169165899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 61.2 bits (147), Expect = 2e-10
 Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 22/101 (21%)

Query: 1   MPKRKVSSAEGAAK-------EEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQT 52
           +PKRK   AEG AK       +EP+RRS R SAKP P K E KPKKA AK          
Sbjct: 51  VPKRK---AEGDAKGDKAKVKDEPQRRSMRFSAKPAPPKPEPKPKKAPAK---------- 97

Query: 53  KGKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAG 93
           KG++  KGK+ + A+   + + PAENG+ KT+++  ++ AG
Sbjct: 98  KGEKIPKGKKGK-ADAGEEGNNPAENGDAKTDQAQKAEGAG 137


>gi|169165087 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 61.2 bits (147), Expect = 2e-10
 Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 22/101 (21%)

Query: 1   MPKRKVSSAEGAAK-------EEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQT 52
           +PKRK   AEG AK       +EP+RRS R SAKP P K E KPKKA AK          
Sbjct: 51  VPKRK---AEGDAKGDKAKVKDEPQRRSMRFSAKPAPPKPEPKPKKAPAK---------- 97

Query: 53  KGKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAG 93
           KG++  KGK+ + A+   + + PAENG+ KT+++  ++ AG
Sbjct: 98  KGEKIPKGKKGK-ADAGEEGNNPAENGDAKTDQAQKAEGAG 137


>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
          Length = 282

 Score = 60.8 bits (146), Expect = 2e-10
 Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 10/98 (10%)

Query: 1  MPKRKVSSAEGAAKEEPKRRSARLSAK-PPAKVEAKPKKAAAKDKSSDK------KVQTK 53
          MPKRK ++ +G  ++EPKRRSARLSA   P   E KPK+ ++  K   K       + T 
Sbjct: 1  MPKRK-AAGQGDMRQEPKRRSARLSAMLVPVTPEVKPKRTSSSRKMKTKSDMMEENIDTS 59

Query: 54 GKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDE 91
           +  A+ KQ  V  ++  E+  A+NGE K  E+PAS++
Sbjct: 60 AQAVAETKQEAVVEEDYNEN--AKNGEAKITEAPASEK 95



 Score = 33.1 bits (74), Expect = 0.049
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 6/96 (6%)

Query: 5   KVSSAEGAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQAE 64
           K +  +G  K E ++           K     K+   K +  D KV+   K    GK+ E
Sbjct: 183 KGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDE 242

Query: 65  VANQE----TKEDLPAENGETKTEESPASDEAGEKE 96
             N+E     KEDL  E  E   EE    ++ G+KE
Sbjct: 243 GGNEEEAGKEKEDLKEE--EEGKEEDEIKEDDGKKE 276



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 5   KVSSAEGAAKEEPKRRSARLSAKPPAKVEAKPKKAA-AKDKSSDKKVQTKGKRGAKGKQA 63
           K++ A  + KE  + +   +        E K   AA  K++  D+K   + +   KG+  
Sbjct: 86  KITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGE-- 143

Query: 64  EVANQETKEDLPAENGETKTEESPASDEAGEKE 96
             A +E K++   E+G+     +   ++A EKE
Sbjct: 144 --AGKEDKDEKGEEDGKEDKNGNEKGEDAKEKE 174



 Score = 25.8 bits (55), Expect = 7.8
 Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 6/91 (6%)

Query: 10  EGAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDKSSDKKVQTKGKRGAKGKQAEVANQE 69
           +G A +E K        K       K + A  K+K   KK +     G  GK  E    E
Sbjct: 141 KGEAGKEDKDEKGEEDGKEDKNGNEKGEDA--KEKEDGKKGEDGKGNGEDGK--EKGEDE 196

Query: 70  TKEDLPAENGETKTEESPASDEAGEKEAKSD 100
            +E+   E G+ K  E     E G+K+   D
Sbjct: 197 KEEEDRKETGDGKENED--GKEKGDKKEGKD 225


>gi|169209024 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score = 59.7 bits (143), Expect = 5e-10
 Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 22/102 (21%)

Query: 1  MPKRKVSSAEGAAK-------EEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQT 52
          MPKRK   AEG AK       ++P+RRSARLS KP P K E KPKK  AK+         
Sbjct: 1  MPKRK---AEGDAKGDKAKVRDKPQRRSARLSTKPAPPKPETKPKKVPAKN--------- 48

Query: 53 KGKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
           G++  KG+  + A+   + + PAENG+ KT+++   + AG+
Sbjct: 49 -GEKVLKGEMGK-ADTGKEGNKPAENGDAKTDQTQKGEGAGD 88


>gi|113425750 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score = 59.7 bits (143), Expect = 5e-10
 Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 22/102 (21%)

Query: 1  MPKRKVSSAEGAAK-------EEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQT 52
          MPKRK   AEG AK       ++P+RRSARLS KP P K E KPKK  AK+         
Sbjct: 1  MPKRK---AEGDAKGDKAKVRDKPQRRSARLSTKPAPPKPETKPKKVPAKN--------- 48

Query: 53 KGKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
           G++  KG+  + A+   + + PAENG+ KT+++   + AG+
Sbjct: 49 -GEKVLKGEMGK-ADTGKEGNKPAENGDAKTDQTQKGEGAGD 88


>gi|113425298 PREDICTED: similar to high-mobility group
          nucleosomal binding domain 2 [Homo sapiens]
          Length = 90

 Score = 59.7 bits (143), Expect = 5e-10
 Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 22/102 (21%)

Query: 1  MPKRKVSSAEGAAK-------EEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQT 52
          MPKRK   AEG AK       ++P+RRSARLS KP P K E KPKK  AK+         
Sbjct: 1  MPKRK---AEGDAKGDKAKVRDKPQRRSARLSTKPAPPKPETKPKKVPAKN--------- 48

Query: 53 KGKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
           G++  KG+  + A+   + + PAENG+ KT+++   + AG+
Sbjct: 49 -GEKVLKGEMGK-ADTGKEGNKPAENGDAKTDQTQKGEGAGD 88


>gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 193

 Score = 58.2 bits (139), Expect = 1e-09
 Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 16/99 (16%)

Query: 1   MPKRKVSSA----EGAAKEEPKRRSARLSAKPPA-KVEAKPKKAAAKDKSSDKKVQTKGK 55
           MPK K        +   K+EP+RRSARLSAKP + K E KPKKA AK          KG+
Sbjct: 36  MPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAK----------KGE 85

Query: 56  RGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
           +  K K+ + A+   + + PAENG+ KT++   ++ AG+
Sbjct: 86  KVLKEKKGK-ADAGKEGNNPAENGDAKTDQEQKAEGAGD 123


>gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 176

 Score = 58.2 bits (139), Expect = 1e-09
 Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 16/99 (16%)

Query: 1   MPKRKVSSA----EGAAKEEPKRRSARLSAKPPA-KVEAKPKKAAAKDKSSDKKVQTKGK 55
           MPK K        +   K+EP+RRSARLSAKP + K E KPKKA AK          KG+
Sbjct: 19  MPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAK----------KGE 68

Query: 56  RGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
           +  K K+ + A+   + + PAENG+ KT++   ++ AG+
Sbjct: 69  KVLKEKKGK-ADAGKEGNNPAENGDAKTDQEQKAEGAGD 106


>gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 176

 Score = 58.2 bits (139), Expect = 1e-09
 Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 16/99 (16%)

Query: 1   MPKRKVSSA----EGAAKEEPKRRSARLSAKPPA-KVEAKPKKAAAKDKSSDKKVQTKGK 55
           MPK K        +   K+EP+RRSARLSAKP + K E KPKKA AK          KG+
Sbjct: 19  MPKGKAEGDPKGDKAKVKDEPQRRSARLSAKPSSPKPEPKPKKAPAK----------KGE 68

Query: 56  RGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
           +  K K+ + A+   + + PAENG+ KT++   ++ AG+
Sbjct: 69  KVLKEKKGK-ADAGKEGNNPAENGDAKTDQEQKAEGAGD 106


>gi|239755359 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 130

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 22/103 (21%)

Query: 1   MPKRKVSSAEGAAK-------EEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQT 52
           +PKRK   AEG AK       ++P+RRS RLSAKP P K E KPK A AK          
Sbjct: 39  VPKRK---AEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAK---------- 85

Query: 53  KGKRGAKGKQ-AEVANQETKEDLPAENGETKTEESPASDEAGE 94
           KG++  KGK+ A  A+   + + PAENG+ K +E+  ++  G+
Sbjct: 86  KGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGD 128


>gi|239749851 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 171

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 22/103 (21%)

Query: 1   MPKRKVSSAEGAAK-------EEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQT 52
           +PKRK   AEG AK       ++P+RRS RLSAKP P K E KPK A AK          
Sbjct: 80  VPKRK---AEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAK---------- 126

Query: 53  KGKRGAKGKQ-AEVANQETKEDLPAENGETKTEESPASDEAGE 94
           KG++  KGK+ A  A+   + + PAENG+ K +E+  ++  G+
Sbjct: 127 KGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGD 169


>gi|239744152 PREDICTED: hypothetical protein XP_002343066 [Homo
           sapiens]
          Length = 171

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 22/103 (21%)

Query: 1   MPKRKVSSAEGAAK-------EEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQT 52
           +PKRK   AEG AK       ++P+RRS RLSAKP P K E KPK A AK          
Sbjct: 80  VPKRK---AEGDAKGDKAKVKDKPQRRSMRLSAKPAPPKPEPKPKNAPAK---------- 126

Query: 53  KGKRGAKGKQ-AEVANQETKEDLPAENGETKTEESPASDEAGE 94
           KG++  KGK+ A  A+   + + PAENG+ K +E+  ++  G+
Sbjct: 127 KGEKVPKGKKGARRADAGKEGNNPAENGDAKRDEAQKAEGTGD 169


>gi|169202834 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score = 57.4 bits (137), Expect = 2e-09
 Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 16/98 (16%)

Query: 2   PKRKVSS----AEGAAKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKR 56
           P+RK        +   K++P+RRS RL+AKP P K  +KPKK  AK+          G++
Sbjct: 15  PRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKN----------GEK 64

Query: 57  GAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
             KGK+ + A+   + + PAENGETKT+ +  ++ AG+
Sbjct: 65  VLKGKKGK-ADAGKEGNNPAENGETKTDHAQKAEGAGD 101


>gi|89034591 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score = 57.4 bits (137), Expect = 2e-09
 Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 16/98 (16%)

Query: 2   PKRKVSS----AEGAAKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKR 56
           P+RK        +   K++P+RRS RL+AKP P K  +KPKK  AK+          G++
Sbjct: 15  PRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKN----------GEK 64

Query: 57  GAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
             KGK+ + A+   + + PAENGETKT+ +  ++ AG+
Sbjct: 65  VLKGKKGK-ADAGKEGNNPAENGETKTDHAQKAEGAGD 101


>gi|89033815 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score = 57.4 bits (137), Expect = 2e-09
 Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 16/98 (16%)

Query: 2   PKRKVSS----AEGAAKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKR 56
           P+RK        +   K++P+RRS RL+AKP P K  +KPKK  AK+          G++
Sbjct: 15  PRRKAKGDAKGVKAKVKDKPQRRSVRLTAKPAPPKPGSKPKKGPAKN----------GEK 64

Query: 57  GAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGE 94
             KGK+ + A+   + + PAENGETKT+ +  ++ AG+
Sbjct: 65  VLKGKKGK-ADAGKEGNNPAENGETKTDHAQKAEGAGD 101


>gi|239753184 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 197

 Score = 55.8 bits (133), Expect = 7e-09
 Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 17/102 (16%)

Query: 1   MPKRKVSS---AEGAAKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKR 56
           +PKRK       + A  + P+RRS RLSAKP P K E KPKKA AK          KG++
Sbjct: 109 LPKRKTEGDVKGDKAKVDTPQRRSTRLSAKPAPPKPEPKPKKAPAK----------KGEK 158

Query: 57  GAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAK 98
             KGK+ + A+   + + PAE G+  T++  A +  G+ EAK
Sbjct: 159 VPKGKKGK-ADAGKEGNYPAEKGDAITDQ--AREAEGDGEAK 197


>gi|239747758 PREDICTED: hypothetical protein XP_002348261 [Homo
           sapiens]
          Length = 197

 Score = 55.8 bits (133), Expect = 7e-09
 Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 17/102 (16%)

Query: 1   MPKRKVSS---AEGAAKEEPKRRSARLSAKP-PAKVEAKPKKAAAKDKSSDKKVQTKGKR 56
           +PKRK       + A  + P+RRS RLSAKP P K E KPKKA AK          KG++
Sbjct: 109 LPKRKTEGDVKGDKAKVDTPQRRSTRLSAKPAPPKPEPKPKKAPAK----------KGEK 158

Query: 57  GAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAK 98
             KGK+ + A+   + + PAE G+  T++  A +  G+ EAK
Sbjct: 159 VPKGKKGK-ADAGKEGNYPAEKGDAITDQ--AREAEGDGEAK 197


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.291    0.111    0.278 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,804,441
Number of Sequences: 37866
Number of extensions: 152973
Number of successful extensions: 1979
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 255
Number of HSP's that attempted gapping in prelim test: 1066
Number of HSP's gapped (non-prelim): 1018
length of query: 100
length of database: 18,247,518
effective HSP length: 71
effective length of query: 29
effective length of database: 15,559,032
effective search space: 451211928
effective search space used: 451211928
T: 11
A: 40
X1: 17 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.