Search of human proteins with 47933395

Search of human proteins with 47933395

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|47933395 lanosterol synthase isoform 1 [Homo sapiens]
         (732 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|47933395 lanosterol synthase isoform 1 [Homo sapiens]             1547   0.0  
gi|47933397 lanosterol synthase isoform 1 [Homo sapiens]             1547   0.0  
gi|224177556 lanosterol synthase isoform 2 [Homo sapiens]            1514   0.0  
gi|224177558 lanosterol synthase isoform 3 [Homo sapiens]            1377   0.0  
gi|4758072 cryptochrome 1 (photolyase-like) [Homo sapiens]             33   1.2  
gi|21359854 RAB geranylgeranyltransferase, beta subunit [Homo sa...    32   1.6  
gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens]       32   2.1  
gi|56549111 optineurin [Homo sapiens]                                  32   2.1  
gi|56549109 optineurin [Homo sapiens]                                  32   2.1  
gi|20149572 optineurin [Homo sapiens]                                  32   2.1  
gi|56549107 optineurin [Homo sapiens]                                  32   2.1  
gi|239756041 PREDICTED: hypothetical protein XP_002344790 [Homo ...    31   3.6  
gi|28875786 FCH and double SH3 domains 1 [Homo sapiens]                30   8.0  

>gi|47933395 lanosterol synthase isoform 1 [Homo sapiens]
          Length = 732

 Score = 1547 bits (4005), Expect = 0.0
 Identities = 732/732 (100%), Positives = 732/732 (100%)

Query: 1   MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT 60
           MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT
Sbjct: 1   MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT 60

Query: 61  KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP 120
           KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP
Sbjct: 61  KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP 120

Query: 121 AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL 180
           AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL
Sbjct: 121 AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL 180

Query: 181 HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM 240
           HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM
Sbjct: 181 HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM 240

Query: 241 SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL 300
           SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL
Sbjct: 241 SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL 300

Query: 301 NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE 360
           NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE
Sbjct: 301 NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE 360

Query: 361 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 420
           HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL
Sbjct: 361 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 420

Query: 421 SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR 480
           SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR
Sbjct: 421 SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR 480

Query: 481 ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA 540
           ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA
Sbjct: 481 ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA 540

Query: 541 LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG 600
           LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG
Sbjct: 541 LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG 600

Query: 601 QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLM 660
           QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLM
Sbjct: 601 QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLM 660

Query: 661 AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS 720
           AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS
Sbjct: 661 AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS 720

Query: 721 QLYPERALAGHP 732
           QLYPERALAGHP
Sbjct: 721 QLYPERALAGHP 732


>gi|47933397 lanosterol synthase isoform 1 [Homo sapiens]
          Length = 732

 Score = 1547 bits (4005), Expect = 0.0
 Identities = 732/732 (100%), Positives = 732/732 (100%)

Query: 1   MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT 60
           MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT
Sbjct: 1   MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT 60

Query: 61  KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP 120
           KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP
Sbjct: 61  KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP 120

Query: 121 AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL 180
           AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL
Sbjct: 121 AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL 180

Query: 181 HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM 240
           HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM
Sbjct: 181 HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM 240

Query: 241 SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL 300
           SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL
Sbjct: 241 SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL 300

Query: 301 NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE 360
           NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE
Sbjct: 301 NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE 360

Query: 361 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 420
           HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL
Sbjct: 361 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 420

Query: 421 SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR 480
           SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR
Sbjct: 421 SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR 480

Query: 481 ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA 540
           ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA
Sbjct: 481 ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA 540

Query: 541 LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG 600
           LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG
Sbjct: 541 LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG 600

Query: 601 QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLM 660
           QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLM
Sbjct: 601 QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLM 660

Query: 661 AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS 720
           AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS
Sbjct: 661 AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS 720

Query: 721 QLYPERALAGHP 732
           QLYPERALAGHP
Sbjct: 721 QLYPERALAGHP 732


>gi|224177556 lanosterol synthase isoform 2 [Homo sapiens]
          Length = 721

 Score = 1514 bits (3920), Expect = 0.0
 Identities = 721/732 (98%), Positives = 721/732 (98%), Gaps = 11/732 (1%)

Query: 1   MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT 60
           MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT
Sbjct: 1   MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT 60

Query: 61  KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP 120
           KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP
Sbjct: 61  KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP 120

Query: 121 AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL 180
           AGYREEIVRYLR           HIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL
Sbjct: 121 AGYREEIVRYLR-----------HIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL 169

Query: 181 HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM 240
           HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM
Sbjct: 170 HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM 229

Query: 241 SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL 300
           SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL
Sbjct: 230 SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL 289

Query: 301 NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE 360
           NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE
Sbjct: 290 NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE 349

Query: 361 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 420
           HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL
Sbjct: 350 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 409

Query: 421 SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR 480
           SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR
Sbjct: 410 SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR 469

Query: 481 ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA 540
           ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA
Sbjct: 470 ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA 529

Query: 541 LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG 600
           LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG
Sbjct: 530 LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG 589

Query: 601 QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLM 660
           QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLM
Sbjct: 590 QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLM 649

Query: 661 AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS 720
           AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS
Sbjct: 650 AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS 709

Query: 721 QLYPERALAGHP 732
           QLYPERALAGHP
Sbjct: 710 QLYPERALAGHP 721


>gi|224177558 lanosterol synthase isoform 3 [Homo sapiens]
          Length = 652

 Score = 1377 bits (3565), Expect = 0.0
 Identities = 652/652 (100%), Positives = 652/652 (100%)

Query: 81  MTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLPAGYREEIVRYLRSVQLPDGG 140
           MTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLPAGYREEIVRYLRSVQLPDGG
Sbjct: 1   MTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLPAGYREEIVRYLRSVQLPDGG 60

Query: 141 WGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNILHKKGGAVAIPSWGKFWLAVL 200
           WGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNILHKKGGAVAIPSWGKFWLAVL
Sbjct: 61  WGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNILHKKGGAVAIPSWGKFWLAVL 120

Query: 201 NVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPMSYCYAVRLSAAEDPLVQSLR 260
           NVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPMSYCYAVRLSAAEDPLVQSLR
Sbjct: 121 NVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPMSYCYAVRLSAAEDPLVQSLR 180

Query: 261 QELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALLNLYEHHHSAHLRQRAVQKLY 320
           QELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALLNLYEHHHSAHLRQRAVQKLY
Sbjct: 181 QELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALLNLYEHHHSAHLRQRAVQKLY 240

Query: 321 EHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQEHVSRIPDYLWMGLDGMKMQG 380
           EHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQEHVSRIPDYLWMGLDGMKMQG
Sbjct: 241 EHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQEHVSRIPDYLWMGLDGMKMQG 300

Query: 381 TNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLSQVPDNPPDYQKYYRQMRKG 440
           TNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLSQVPDNPPDYQKYYRQMRKG
Sbjct: 301 TNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLSQVPDNPPDYQKYYRQMRKG 360

Query: 441 GFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPRERLCDAVAVLLNMRNPDGGF 500
           GFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPRERLCDAVAVLLNMRNPDGGF
Sbjct: 361 GFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPRERLCDAVAVLLNMRNPDGGF 420

Query: 501 ATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQALKYFHKRFPEHRAAEIRETL 560
           ATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQALKYFHKRFPEHRAAEIRETL
Sbjct: 421 ATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQALKYFHKRFPEHRAAEIRETL 480

Query: 561 TQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGTACAEVSRACDFLL 620
           TQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGTACAEVSRACDFLL
Sbjct: 481 TQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGTACAEVSRACDFLL 540

Query: 621 SRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLMAVRHPDIEAQERGVRCLLEK 680
           SRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLMAVRHPDIEAQERGVRCLLEK
Sbjct: 541 SRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLMAVRHPDIEAQERGVRCLLEK 600

Query: 681 QLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFSQLYPERALAGHP 732
           QLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFSQLYPERALAGHP
Sbjct: 601 QLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFSQLYPERALAGHP 652



 Score = 30.0 bits (66), Expect = 8.0
 Identities = 26/93 (27%), Positives = 32/93 (34%), Gaps = 7/93 (7%)

Query: 61  KNYFKDLPKAHTAF--EGALNGMTFYVGLQAEDGHWTGDYG-----GPLFLLPGLLITCH 113
           K + K  P+   A   E    G+ F    Q  DG W G +G     G  F L        
Sbjct: 462 KYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMGQ 521

Query: 114 VARIPLPAGYREEIVRYLRSVQLPDGGWGLHIE 146
             R             +L S Q+ DGGWG   E
Sbjct: 522 TYRDGTACAEVSRACDFLLSRQMADGGWGEDFE 554


>gi|4758072 cryptochrome 1 (photolyase-like) [Homo sapiens]
          Length = 586

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 193 GKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPMSYCYA-VRLSAA 251
           G  W+      SWE    +F E+ L  DW+    S +W  C   +    +CY  V     
Sbjct: 368 GDLWI------SWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRR 421

Query: 252 EDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALLNLYEHHHSAHL 311
            DP    +R+ L V       ++    N AP+ +      L+ V Y    +  H  ++ L
Sbjct: 422 TDPNGDYIRRYLPVLRGFPAKYIYDPWN-APEGIQKVAKCLIGVNYP-KPMVNHAEASRL 479

Query: 312 RQRAVQKLYEHI 323
               ++++Y+ +
Sbjct: 480 NIERMKQIYQQL 491


>gi|21359854 RAB geranylgeranyltransferase, beta subunit [Homo
           sapiens]
          Length = 331

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 16/123 (13%)

Query: 564 LEFCRRQQRADGSWEGS-WGVCFTYGTWFGLEAFACMGQTYRDGTACAEVSRACDFLLSR 622
           +E+ +  Q+ DGS+ G  WG   T  ++  +   A +G+          V +A +F+LS 
Sbjct: 120 VEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKL-----DAINVEKAIEFVLSC 174

Query: 623 QMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLMAVRHPDIEAQERGVRCLLEKQL 682
              DGG+G     C  R   +S   QI+  C   + + +  H  + +   G   L E+QL
Sbjct: 175 MNFDGGFG-----C--RPGSESHAGQIY-CCTGFLAITSQLH-QVNSDLLG-WWLCERQL 224

Query: 683 PNG 685
           P+G
Sbjct: 225 PSG 227


>gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens]
          Length = 967

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 287 TPHSWLLRVVYALLNLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKT 341
           TPH+      Y+ L+ ++HHH  H+ Q +    ++H    D  T+  S+   +KT
Sbjct: 456 TPHNASSFTSYSQLHFFDHHHRGHIPQYSQLDFFDH-YNRDHLTQFTSLITTTKT 509


>gi|56549111 optineurin [Homo sapiens]
          Length = 577

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 41  DERAGREQTGLEAYALGLDTKNYFKDLPKAHTAFEGA 77
           DE  G E  G E  AL L   + FK+L +AHT    A
Sbjct: 287 DEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEA 323


>gi|56549109 optineurin [Homo sapiens]
          Length = 577

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 41  DERAGREQTGLEAYALGLDTKNYFKDLPKAHTAFEGA 77
           DE  G E  G E  AL L   + FK+L +AHT    A
Sbjct: 287 DEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEA 323


>gi|20149572 optineurin [Homo sapiens]
          Length = 577

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 41  DERAGREQTGLEAYALGLDTKNYFKDLPKAHTAFEGA 77
           DE  G E  G E  AL L   + FK+L +AHT    A
Sbjct: 287 DEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEA 323


>gi|56549107 optineurin [Homo sapiens]
          Length = 577

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 41  DERAGREQTGLEAYALGLDTKNYFKDLPKAHTAFEGA 77
           DE  G E  G E  AL L   + FK+L +AHT    A
Sbjct: 287 DEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEA 323


>gi|239756041 PREDICTED: hypothetical protein XP_002344790 [Homo
          sapiens]
          Length = 172

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 15/26 (57%), Positives = 15/26 (57%)

Query: 7  LRRRGGPYKTEPATDLGRWRLNCERG 32
          LRR GGP   E     GRWRL C RG
Sbjct: 49 LRREGGPAVHEALHRGGRWRLLCARG 74


>gi|28875786 FCH and double SH3 domains 1 [Homo sapiens]
          Length = 690

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 41  DERAGREQTGLEAYALGLDTKNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGG 100
           D   G E T   A AL   T    ++L       EGAL  +        +DG W G++GG
Sbjct: 539 DNPCGAEPTAFLAQALYSYTGQSAEELSFP----EGALIRLLPRAQDGVDDGFWRGEFGG 594

Query: 101 PLFLLPGLLI 110
            + + P LL+
Sbjct: 595 RVGVFPSLLV 604


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,123,615
Number of Sequences: 37866
Number of extensions: 1367089
Number of successful extensions: 2533
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2499
Number of HSP's gapped (non-prelim): 16
length of query: 732
length of database: 18,247,518
effective HSP length: 110
effective length of query: 622
effective length of database: 14,082,258
effective search space: 8759164476
effective search space used: 8759164476
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.