Guide to the Human Genome
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Search of human proteins with 4759220

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4759220 T-cell leukemia/lymphoma 1B [Homo sapiens]
         (128 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40548375 T-cell leukemia/lymphoma 1B [Homo sapiens]                268   9e-73
gi|4759220 T-cell leukemia/lymphoma 1B [Homo sapiens]                 268   9e-73
gi|66346715 mature T-cell proliferation 1 [Homo sapiens]               67   4e-12
gi|148922879 T-cell leukemia/lymphoma 1A [Homo sapiens]                59   1e-09
gi|11415028 T-cell leukemia/lymphoma 1A [Homo sapiens]                 59   1e-09
gi|116534900 dopamine beta hydroxylase precursor [Homo sapiens]        30   0.67 
gi|194272183 G protein-coupled receptor 124 [Homo sapiens]             30   0.67 
gi|10863945 ATP-dependent DNA helicase II [Homo sapiens]               28   2.6  
gi|21070976 diablo isoform 3 precursor [Homo sapiens]                  28   2.6  
gi|9845297 diablo isoform 1 precursor [Homo sapiens]                   28   2.6  
gi|28872800 CCAAT/enhancer binding protein epsilon [Homo sapiens]      27   5.7  
gi|239756943 PREDICTED: hypothetical protein [Homo sapiens]            26   7.4  
gi|239751443 PREDICTED: hypothetical protein [Homo sapiens]            26   7.4  
gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo ...    26   7.4  
gi|20149540 lysyl oxidase preproprotein [Homo sapiens]                 26   9.7  
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)...    26   9.7  
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)...    26   9.7  
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)...    26   9.7  

>gi|40548375 T-cell leukemia/lymphoma 1B [Homo sapiens]
          Length = 128

 Score =  268 bits (685), Expect = 9e-73
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MASEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSIT 60
           MASEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSIT
Sbjct: 1   MASEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSIT 60

Query: 61  VHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL 120
           VHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL
Sbjct: 61  VHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL 120

Query: 121 TYQPERKD 128
           TYQPERKD
Sbjct: 121 TYQPERKD 128


>gi|4759220 T-cell leukemia/lymphoma 1B [Homo sapiens]
          Length = 128

 Score =  268 bits (685), Expect = 9e-73
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MASEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSIT 60
           MASEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSIT
Sbjct: 1   MASEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSIT 60

Query: 61  VHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL 120
           VHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL
Sbjct: 61  VHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL 120

Query: 121 TYQPERKD 128
           TYQPERKD
Sbjct: 121 TYQPERKD 128


>gi|66346715 mature T-cell proliferation 1 [Homo sapiens]
          Length = 107

 Score = 67.0 bits (162), Expect = 4e-12
 Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 22/120 (18%)

Query: 9   LGVPPGRLWIQRPGIYEDEEGRTWVTVV---VRFNPSRREWARASQGSRYEPSITVHLWQ 65
           +G PP  LW+ + GIY DE  RTWV VV     F  +R +  +   G    PS       
Sbjct: 6   VGAPPDHLWVHQEGIYRDEYQRTWVAVVEEETSFLRARVQQIQVPLGDAARPS------- 58

Query: 66  MAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVLTYQPE 125
                  LL+S      QLP +WQLYP  +Y   +S  W+I  H  +  +++L+L   P+
Sbjct: 59  ------HLLTS------QLPLMWQLYPEERYMDNNSRLWQIQHHLMVRGVQELLLKLLPD 106


>gi|148922879 T-cell leukemia/lymphoma 1A [Homo sapiens]
          Length = 114

 Score = 58.9 bits (141), Expect = 1e-09
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)

Query: 13  PGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSITVHLWQMAVHTRE 72
           P RLW     +Y DE+   W+ + +      +              + V L +  V    
Sbjct: 15  PDRLWAWEKFVYLDEKQHAWLPLTIEIKDRLQ--------------LRVLLRREDVVLGR 60

Query: 73  LLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVLTYQPE 125
            ++  Q+  S LP +WQLYP  +YR++DSSFW +  H +ID +E ++L   P+
Sbjct: 61  PMTPTQIGPSLLPIMWQLYPDGRYRSSDSSFWRLVYHIKIDGVEDMLLELLPD 113


>gi|11415028 T-cell leukemia/lymphoma 1A [Homo sapiens]
          Length = 114

 Score = 58.9 bits (141), Expect = 1e-09
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)

Query: 13  PGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSITVHLWQMAVHTRE 72
           P RLW     +Y DE+   W+ + +      +              + V L +  V    
Sbjct: 15  PDRLWAWEKFVYLDEKQHAWLPLTIEIKDRLQ--------------LRVLLRREDVVLGR 60

Query: 73  LLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVLTYQPE 125
            ++  Q+  S LP +WQLYP  +YR++DSSFW +  H +ID +E ++L   P+
Sbjct: 61  PMTPTQIGPSLLPIMWQLYPDGRYRSSDSSFWRLVYHIKIDGVEDMLLELLPD 113


>gi|116534900 dopamine beta hydroxylase precursor [Homo sapiens]
          Length = 617

 Score = 29.6 bits (65), Expect = 0.67
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 3   SEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEP 57
           ++   +L +PP  + I    ++    GR  VTV+VR     REW   +Q + Y P
Sbjct: 391 TDKCTQLALPPSGIHIFASQLHTHLTGRKVVTVLVR---DGREWEIVNQDNHYSP 442


>gi|194272183 G protein-coupled receptor 124 [Homo sapiens]
          Length = 1338

 Score = 29.6 bits (65), Expect = 0.67
 Identities = 24/88 (27%), Positives = 36/88 (40%)

Query: 41  PSRREWARASQGSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAAD 100
           P  R   R  +  R+EP    H       TR L +   MP +   A+   +  R Y A  
Sbjct: 395 PGTRASRRCDRAGRWEPGDYSHCLYTNDITRVLYTFVLMPINASNALTLAHQLRVYTAEA 454

Query: 101 SSFWEIADHGQIDSMEQLVLTYQPERKD 128
           +SF ++ D   +  M Q  L Y  + K+
Sbjct: 455 ASFSDMMDVVYVAQMIQKFLGYVDQIKE 482


>gi|10863945 ATP-dependent DNA helicase II [Homo sapiens]
          Length = 732

 Score = 27.7 bits (60), Expect = 2.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 57  PSITVHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRK 95
           P I  H+W M     E+ +  Q+P S++  ++ L   +K
Sbjct: 506 PPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIEAKK 544


>gi|21070976 diablo isoform 3 precursor [Homo sapiens]
          Length = 195

 Score = 27.7 bits (60), Expect = 2.6
 Identities = 13/58 (22%), Positives = 26/58 (44%)

Query: 63  LWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL 120
           +WQ+ +  R  ++S    + +L   W    G    AA++++   AD   I +   + L
Sbjct: 88  VWQVIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARNHIQL 145


>gi|9845297 diablo isoform 1 precursor [Homo sapiens]
          Length = 239

 Score = 27.7 bits (60), Expect = 2.6
 Identities = 13/58 (22%), Positives = 26/58 (44%)

Query: 63  LWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL 120
           +WQ+ +  R  ++S    + +L   W    G    AA++++   AD   I +   + L
Sbjct: 132 VWQVIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARNHIQL 189


>gi|28872800 CCAAT/enhancer binding protein epsilon [Homo sapiens]
          Length = 281

 Score = 26.6 bits (57), Expect = 5.7
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 21  PGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEP--SITVHLWQMAVHTRELLSSGQ 78
           PGIY          V V+  P   E +RA+    Y P      H  Q A+H    L++  
Sbjct: 104 PGIYSSPGSYDPRAVAVKEEPRGPEGSRAASRGSYNPLQYQVAHCGQTAMHLPPTLAAPG 163

Query: 79  MPFSQLPA 86
            P   L A
Sbjct: 164 QPLRVLKA 171


>gi|239756943 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 783

 Score = 26.2 bits (56), Expect = 7.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 50 SQGSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPA 86
          S   R E ++ +  W +AV    ++SSG M FS  PA
Sbjct: 2  SSARRVELALPI-TWLLAVARGRMMSSGHMAFSHWPA 37


>gi|239751443 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 783

 Score = 26.2 bits (56), Expect = 7.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 50 SQGSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPA 86
          S   R E ++ +  W +AV    ++SSG M FS  PA
Sbjct: 2  SSARRVELALPI-TWLLAVARGRMMSSGHMAFSHWPA 37


>gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo
          sapiens]
          Length = 791

 Score = 26.2 bits (56), Expect = 7.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 50 SQGSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPA 86
          S   R E ++ +  W +AV    ++SSG M FS  PA
Sbjct: 2  SSARRVELALPI-TWLLAVARGRMMSSGHMAFSHWPA 37


>gi|20149540 lysyl oxidase preproprotein [Homo sapiens]
          Length = 417

 Score = 25.8 bits (55), Expect = 9.7
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 85  PAVWQLYPGRKYRAADSSF-----WEIADHGQIDSMEQLVLTYQPERK 127
           PA  Q  P R+  AA  ++     WE  ++GQ+ S+  L   YQP+R+
Sbjct: 24  PAAGQQQPPREPPAAPGAWRQQIQWE--NNGQVFSLLSLGSQYQPQRR 69


>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 25.8 bits (55), Expect = 9.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 52   GSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPAV 87
            GS  +PS T  L ++   T  ++    MP+S  PAV
Sbjct: 1742 GSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAV 1777


>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 25.8 bits (55), Expect = 9.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 52   GSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPAV 87
            GS  +PS T  L ++   T  ++    MP+S  PAV
Sbjct: 1742 GSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAV 1777


>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 25.8 bits (55), Expect = 9.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 52   GSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPAV 87
            GS  +PS T  L ++   T  ++    MP+S  PAV
Sbjct: 1742 GSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAV 1777


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.132    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,646,152
Number of Sequences: 37866
Number of extensions: 228282
Number of successful extensions: 366
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 348
Number of HSP's gapped (non-prelim): 18
length of query: 128
length of database: 18,247,518
effective HSP length: 90
effective length of query: 38
effective length of database: 14,839,578
effective search space: 563903964
effective search space used: 563903964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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