Guide to the Human Genome
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Name: TCL1B Sequence: fasta or formatted (128aa) NCBI GI: 4759220
Description:

T-cell leukemia/lymphoma 1B

Referenced in:

T cells

Other entries for this name:
alt mRNA [128aa] T-cell leukemia/lymphoma 1B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0          9           2
 C cysteine            0.0          0           0
 D aspartate           3.9          5           1
 E glutamate           7.8         10           2
 F phenylalanine       2.3          3           1
 G glycine             6.2          8           1
 H histidine           2.3          3           1
 I isoleucine          3.9          5           1
 K lysine              1.6          2           1
 L leucine             7.0          9           2
 M methionine          3.1          4           1
 N asparagine          0.8          1           1
 P proline             7.0          9           2
 Q glutamine           7.0          9           1
 R arginine           10.2         13           2
 S serine              9.4         12           2
 T threonine           3.9          5           1
 V valine              7.8         10           3
 W tryptophan          4.7          6           1
 Y tyrosine            3.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   T-cell leukemia/lymphoma 1B 
TCL1B                 1.000   T-cell leukemia/lymphoma 1B 
MTCP1                 0.173   mature T-cell proliferation 1 
TCL1A                 0.140   T-cell leukemia/lymphoma 1A 
TCL1A                 0.140   T-cell leukemia/lymphoma 1A 
DBH                   0.021   dopamine beta hydroxylase precursor 
GPR124                0.021   G protein-coupled receptor 124 
XRCC5                 0.012   ATP-dependent DNA helicase II 
DIABLO                0.012   diablo isoform 3 precursor 
DIABLO                0.012   diablo isoform 1 precursor 
CEBPE                 0.008   CCAAT/enhancer binding protein epsilon 
LOC100292287          0.004   PREDICTED: hypothetical protein 
LOC100289576          0.004   PREDICTED: hypothetical protein 
LOC100289576          0.004   PREDICTED: hypothetical protein XP_002343622 
LOX                   0.004   lysyl oxidase preproprotein 
MYST3                 0.004   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.004   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.004   MYST histone acetyltransferase (monocytic leukemia)...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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