Guide to the Human Genome
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Search of human proteins with 4758900

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758900 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase
3 isoform 1 [Homo sapiens]
         (520 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758900 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3...  1056   0.0  
gi|224282149 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase...  1004   0.0  
gi|64762406 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase ...   692   0.0  
gi|64762445 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase ...   676   0.0  
gi|4758902 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4...   670   0.0  
gi|118582286 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase...   669   0.0  
gi|122937514 unc-13 homolog C [Homo sapiens]                           31   2.4  
gi|115511012 coiled-coil domain containing 136 [Homo sapiens]          31   2.4  
gi|24497515 homeobox A3 isoform b [Homo sapiens]                       31   3.1  
gi|24497513 homeobox A3 isoform a [Homo sapiens]                       31   3.1  
gi|13562112 homeobox A3 isoform a [Homo sapiens]                       31   3.1  
gi|26051204 calcium/calmodulin-dependent protein kinase II beta ...    30   4.1  
gi|87298935 engulfment and cell motility 3 [Homo sapiens]              30   4.1  
gi|183396780 ubiquitin specific protease 20 [Homo sapiens]             30   7.0  
gi|183397136 ubiquitin specific protease 20 [Homo sapiens]             30   7.0  
gi|183397134 ubiquitin specific protease 20 [Homo sapiens]             30   7.0  
gi|24497589 aristaless related homeobox [Homo sapiens]                 30   7.0  
gi|108860697 zinc finger protein 592 [Homo sapiens]                    30   7.0  
gi|223005897 GPN-loop GTPase 1 isoform a [Homo sapiens]                29   9.1  

>gi|4758900 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
           isoform 1 [Homo sapiens]
          Length = 520

 Score = 1056 bits (2730), Expect = 0.0
 Identities = 520/520 (100%), Positives = 520/520 (100%)

Query: 1   MPLELTQSRVQKIWVPVDHRPSLPRSCGPKLTNSPTVIVMVGLPARGKTYISKKLTRYLN 60
           MPLELTQSRVQKIWVPVDHRPSLPRSCGPKLTNSPTVIVMVGLPARGKTYISKKLTRYLN
Sbjct: 1   MPLELTQSRVQKIWVPVDHRPSLPRSCGPKLTNSPTVIVMVGLPARGKTYISKKLTRYLN 60

Query: 61  WIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQ 120
           WIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQ
Sbjct: 61  WIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQ 120

Query: 121 IAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNS 180
           IAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNS
Sbjct: 121 IAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNS 180

Query: 181 AEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYLM 240
           AEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYLM
Sbjct: 181 AEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYLM 240

Query: 241 NIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTSQ 300
           NIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTSQ
Sbjct: 241 NIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTSQ 300

Query: 301 LKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPTG 360
           LKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPTG
Sbjct: 301 LKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPTG 360

Query: 361 ESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLKL 420
           ESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLKL
Sbjct: 361 ESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLKL 420

Query: 421 TPVAYGCRVESIYLNVESVCTHRERSEDAKKGPNPLMRRNSVTPLASPEPTKKPRINSFE 480
           TPVAYGCRVESIYLNVESVCTHRERSEDAKKGPNPLMRRNSVTPLASPEPTKKPRINSFE
Sbjct: 421 TPVAYGCRVESIYLNVESVCTHRERSEDAKKGPNPLMRRNSVTPLASPEPTKKPRINSFE 480

Query: 481 EHVASTSAALPSCLPPEVPTQLPGQNMKGSRSSADSSRKH 520
           EHVASTSAALPSCLPPEVPTQLPGQNMKGSRSSADSSRKH
Sbjct: 481 EHVASTSAALPSCLPPEVPTQLPGQNMKGSRSSADSSRKH 520


>gi|224282149 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
           isoform 2 [Homo sapiens]
          Length = 500

 Score = 1004 bits (2595), Expect = 0.0
 Identities = 494/496 (99%), Positives = 496/496 (100%)

Query: 25  RSCGPKLTNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSS 84
           ++CGPKLTNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSS
Sbjct: 5   KACGPKLTNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSS 64

Query: 85  YNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKEN 144
           YNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKEN
Sbjct: 65  YNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKEN 124

Query: 145 DFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPD 204
           DFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPD
Sbjct: 125 DFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPD 184

Query: 205 KCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYLMNIHVQPRTIYLCRHGENEHNLQGR 264
           KCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYLMNIHVQPRTIYLCRHGENEHNLQGR
Sbjct: 185 KCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYLMNIHVQPRTIYLCRHGENEHNLQGR 244

Query: 265 IGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTSQLKSTIQTAEALRLPYEQWKALNEI 324
           IGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTSQLKSTIQTAEALRLPYEQWKALNEI
Sbjct: 245 IGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTSQLKSTIQTAEALRLPYEQWKALNEI 304

Query: 325 DAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQENVL 384
           DAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQENVL
Sbjct: 305 DAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQENVL 364

Query: 385 VICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLKLTPVAYGCRVESIYLNVESVCTHRE 444
           VICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLKLTPVAYGCRVESIYLNVESVCTHRE
Sbjct: 365 VICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLKLTPVAYGCRVESIYLNVESVCTHRE 424

Query: 445 RSEDAKKGPNPLMRRNSVTPLASPEPTKKPRINSFEEHVASTSAALPSCLPPEVPTQLPG 504
           RSEDAKKGPNPLMRRNSVTPLASPEPTKKPRINSFEEHVASTSAALPSCLPPEVPTQLPG
Sbjct: 425 RSEDAKKGPNPLMRRNSVTPLASPEPTKKPRINSFEEHVASTSAALPSCLPPEVPTQLPG 484

Query: 505 QNMKGSRSSADSSRKH 520
           QNMKGSRSSADSSRKH
Sbjct: 485 QNMKGSRSSADSSRKH 500


>gi|64762406 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
           isoform a [Homo sapiens]
          Length = 505

 Score =  692 bits (1786), Expect = 0.0
 Identities = 333/447 (74%), Positives = 389/447 (87%), Gaps = 2/447 (0%)

Query: 31  LTNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRP 90
           +TNSPT+IVM+GLPARGKTY+SKKLTRYLNWIGVPTKVFN+G YRREAVK Y SY+FFR 
Sbjct: 34  MTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYKSYDFFRH 93

Query: 91  DNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKAFF 150
           DNEEAMK+RKQCAL AL DVK+YL +E GQIAVFDATNTTRERR MIL+FA++N FK FF
Sbjct: 94  DNEEAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMILNFAEQNSFKVFF 153

Query: 151 IESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPDKCDRDL 210
           +ESVCDDP V+A+NI+EVK+SSPDY + N    M+DF+KRI CY+ +Y+PLDPD  D+DL
Sbjct: 154 VESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTYRPLDPDNYDKDL 213

Query: 211 SLIKVIDVGRRFLVNRVQDHIQSRIVYYLMNIHVQPRTIYLCRHGENEHNLQGRIGGDSG 270
           S IKVI+VG+RFLVNRVQD+IQS+IVYYLMNIHVQPRTIYLCRHGE+E NL G+IGGDSG
Sbjct: 214 SFIKVINVGQRFLVNRVQDYIQSKIVYYLMNIHVQPRTIYLCRHGESEFNLLGKIGGDSG 273

Query: 271 LSSRGKKFASALSKFVEEQNLKDLRVWTSQLKSTIQTAEALRLPYEQWKALNEIDAGVCE 330
           LS RGK+FA AL KF+EEQ + DL+VWTSQLK TIQTAE+L +PYEQWK LNEIDAGVCE
Sbjct: 274 LSVRGKQFAQALRKFLEEQEITDLKVWTSQLKRTIQTAESLGVPYEQWKILNEIDAGVCE 333

Query: 331 ELTYEEIRDTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQENVLVICHQA 390
           E+TY EI   YPEE+ALR+Q+KY YRYP GESYQDLVQRLEPVIMELERQ NVLVI HQA
Sbjct: 334 EMTYAEIEKRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELERQGNVLVISHQA 393

Query: 391 VLRCLLAYFLDKSAEEMPYLKCPLHTVLKLTPVAYGCRVESIYLNVESVCTHRER-SEDA 449
           V+RCLLAYFLDK A+E+PYL+CPLHT+ KLTPVAYGC+VE+I LNVE+V THR++ + + 
Sbjct: 394 VMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKLNVEAVNTHRDKPTNNF 453

Query: 450 KKGPNPL-MRRNSVTPLASPEPTKKPR 475
            K   P+ MRRNS TPL+S    ++PR
Sbjct: 454 PKNQTPVRMRRNSFTPLSSSNTIRRPR 480


>gi|64762445 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
           isoform b [Homo sapiens]
          Length = 471

 Score =  676 bits (1743), Expect = 0.0
 Identities = 326/438 (74%), Positives = 378/438 (86%), Gaps = 1/438 (0%)

Query: 31  LTNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRP 90
           +TNSPT+IVM+GLPARGKTY+SKKLTRYLNWIGVPTKVFN+G YRREAVK Y SY+FFR 
Sbjct: 34  MTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREAVKSYKSYDFFRH 93

Query: 91  DNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKAFF 150
           DNEEAMK+RKQCAL AL DVK+YL +E GQIAVFDATNTTRERR MIL+FA++N FK FF
Sbjct: 94  DNEEAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMILNFAEQNSFKVFF 153

Query: 151 IESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPDKCDRDL 210
           +ESVCDDP V+A+NI+EVK+SSPDY + N    M+DF+KRI CY+ +Y+PLDPD  D+DL
Sbjct: 154 VESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTYRPLDPDNYDKDL 213

Query: 211 SLIKVIDVGRRFLVNRVQDHIQSRIVYYLMNIHVQPRTIYLCRHGENEHNLQGRIGGDSG 270
           S IKVI+VG+RFLVNRVQD+IQS+IVYYLMNIHVQPRTIYLCRHGE+E NL G+IGGDSG
Sbjct: 214 SFIKVINVGQRFLVNRVQDYIQSKIVYYLMNIHVQPRTIYLCRHGESEFNLLGKIGGDSG 273

Query: 271 LSSRGKKFASALSKFVEEQNLKDLRVWTSQLKSTIQTAEALRLPYEQWKALNEIDAGVCE 330
           LS RGK+FA AL KF+EEQ + DL+VWTSQLK TIQTAE+L +PYEQWK LNEIDAGVCE
Sbjct: 274 LSVRGKQFAQALRKFLEEQEITDLKVWTSQLKRTIQTAESLGVPYEQWKILNEIDAGVCE 333

Query: 331 ELTYEEIRDTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQENVLVICHQA 390
           E+TY EI   YPEE+ALR+Q+KY YRYP GESYQDLVQRLEPVIMELERQ NVLVI HQA
Sbjct: 334 EMTYAEIEKRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELERQGNVLVISHQA 393

Query: 391 VLRCLLAYFLDKSAEEMPYLKCPLHTVLKLTPVAYGCRVESIYLNVESVCTHRERSEDAK 450
           V+RCLLAYFLDK A+E+PYL+CPLHT+ KLTPVAYGC+VE+I LNVE+V THR++   A 
Sbjct: 394 VMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKLNVEAVNTHRDK-PTAA 452

Query: 451 KGPNPLMRRNSVTPLASP 468
           +    + RR S   L  P
Sbjct: 453 ETTLAVRRRPSAASLMLP 470


>gi|4758902 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
           [Homo sapiens]
          Length = 469

 Score =  670 bits (1729), Expect = 0.0
 Identities = 321/450 (71%), Positives = 391/450 (86%), Gaps = 5/450 (1%)

Query: 2   PLELTQSRVQKIWVPVDH-RPSLPRSC--GPKLTNSPTVIVMVGLPARGKTYISKKLTRY 58
           P ELTQ+ ++KIW+P  + RP+L  +C  G  +TN PT+IVMVGLPARGKTYISKKLTRY
Sbjct: 4   PRELTQNPLKKIWMPYSNGRPAL-HACQRGVCMTNCPTLIVMVGLPARGKTYISKKLTRY 62

Query: 59  LNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEG 118
           LNWIGVPT+ FNVG+YRR+ VK Y S+ FF PDNEE +K+RKQCALAALRDV+ +L++EG
Sbjct: 63  LNWIGVPTREFNVGQYRRDVVKTYKSFEFFLPDNEEGLKIRKQCALAALRDVRRFLSEEG 122

Query: 119 GQIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDC 178
           G +AVFDATNTTRERR  I +F ++N +K FF+ES+C DP V+A+NI++VK+ SPDY + 
Sbjct: 123 GHVAVFDATNTTRERRATIFNFGEQNGYKTFFVESICVDPEVIAANIVQVKLGSPDYVNR 182

Query: 179 NSAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYY 238
           +S EA +DFM+RI CYE SY+ LD D  DRDLS IK++DVG+ ++VNRV DHIQSRIVYY
Sbjct: 183 DSDEATEDFMRRIECYENSYESLDED-LDRDLSYIKIMDVGQSYVVNRVADHIQSRIVYY 241

Query: 239 LMNIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWT 298
           LMNIHV PR+IYLCRHGE+E NL+GRIGGD GLS RG++FA +L++F+ +QN+KDL+VWT
Sbjct: 242 LMNIHVTPRSIYLCRHGESELNLKGRIGGDPGLSPRGREFAKSLAQFISDQNIKDLKVWT 301

Query: 299 SQLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYP 358
           SQ+K TIQTAEAL +PYEQWK LNEIDAGVCEE+TYEEI+D YP E+ALR+QDKY YRYP
Sbjct: 302 SQMKRTIQTAEALGVPYEQWKVLNEIDAGVCEEMTYEEIQDNYPLEFALRDQDKYRYRYP 361

Query: 359 TGESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVL 418
            GESY+DLVQRLEPVIMELERQENVLVICHQAV+RCLLAYFLDK+AE++PYLKCPLHTVL
Sbjct: 362 KGESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKAAEQLPYLKCPLHTVL 421

Query: 419 KLTPVAYGCRVESIYLNVESVCTHRERSED 448
           KLTPVAYGC+VESI+LNV +V THR+R ++
Sbjct: 422 KLTPVAYGCKVESIFLNVAAVNTHRDRPQN 451


>gi|118582286 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
           [Homo sapiens]
          Length = 471

 Score =  669 bits (1726), Expect = 0.0
 Identities = 321/449 (71%), Positives = 385/449 (85%), Gaps = 6/449 (1%)

Query: 4   ELTQSRVQKIWVPVDHRPS-LPRSCG---PKLTNSPTVIVMVGLPARGKTYISKKLTRYL 59
           ELTQ+R+QKIW+P     S L R  G   P+ TNSPT+++MVGLPARGKTYIS KLTRYL
Sbjct: 7   ELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL 66

Query: 60  NWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGG 119
           NWIG PTKVFN+G+YRREAV  Y +Y FF PDN EA+++RKQCALAAL+DV +YL+ E G
Sbjct: 67  NWIGTPTKVFNLGQYRREAVS-YKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEG 125

Query: 120 QIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCN 179
            +AVFDATNTTRERR +IL FAKE+ +K FFIES+C+DP ++A NI +VK+ SPDY DC+
Sbjct: 126 HVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185

Query: 180 SAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYL 239
             + ++DF+KRI CYE +YQPLD ++ D  LS IK+ DVG R++VNRVQDHIQSR VYYL
Sbjct: 186 REKVLEDFLKRIECYEVNYQPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244

Query: 240 MNIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTS 299
           MNIHV PR+IYLCRHGE+E N++GRIGGDSGLS RGK++A AL+ F++ Q +  L+VWTS
Sbjct: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304

Query: 300 QLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPT 359
            +K TIQTAEAL +PYEQWKALNEIDAGVCEE+TYEEI++ YPEE+ALR+QDKY YRYP 
Sbjct: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364

Query: 360 GESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLK 419
           GESY+DLVQRLEPVIMELERQENVLVICHQAV+RCLLAYFLDKS++E+PYLKCPLHTVLK
Sbjct: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424

Query: 420 LTPVAYGCRVESIYLNVESVCTHRERSED 448
           LTPVAYGC+VESIYLNVE+V THRE+ E+
Sbjct: 425 LTPVAYGCKVESIYLNVEAVNTHREKPEN 453


>gi|122937514 unc-13 homolog C [Homo sapiens]
          Length = 2214

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 13/45 (28%), Positives = 25/45 (55%)

Query: 339 DTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQENV 383
           D Y E Y  + +D+  Y  P  ++  D V+ +E V+ +LE + ++
Sbjct: 851 DVYTEPYYYKAEDEEDYTEPVADNETDYVEVMEQVLAKLENRTSI 895


>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
          Length = 1154

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 10/128 (7%)

Query: 283 SKFVEEQNLKDL--RVWTSQLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDT 340
           S  VE Q+ K+L  R+    L+    T E  +L   Q +   E+    C E   + +RDT
Sbjct: 407 STLVENQSEKELLCRLQKLHLQHQNVTCEKEKLLERQQQLQEELQ---CHEAELQHLRDT 463

Query: 341 YPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFL 400
                   E+D       T    Q++ Q  +    ELERQ+++     Q +L C L    
Sbjct: 464 VASFKESNEKDT-----ETHAQLQEMKQLYQASKDELERQKHMYDQLEQDLLLCQLELKE 518

Query: 401 DKSAEEMP 408
            K++  +P
Sbjct: 519 LKASHPIP 526


>gi|24497515 homeobox A3 isoform b [Homo sapiens]
          Length = 285

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 467 SPEPTKKPRINSFEEHVASTSAALPSCLPPEVP 499
           SP P  KP   ++    AS  A+LPSC PP  P
Sbjct: 135 SPPPFSKPPQGTYGLPPASYPASLPSCAPPPPP 167


>gi|24497513 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 467 SPEPTKKPRINSFEEHVASTSAALPSCLPPEVP 499
           SP P  KP   ++    AS  A+LPSC PP  P
Sbjct: 293 SPPPFSKPPQGTYGLPPASYPASLPSCAPPPPP 325


>gi|13562112 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 467 SPEPTKKPRINSFEEHVASTSAALPSCLPPEVP 499
           SP P  KP   ++    AS  A+LPSC PP  P
Sbjct: 293 SPPPFSKPPQGTYGLPPASYPASLPSCAPPPPP 325


>gi|26051204 calcium/calmodulin-dependent protein kinase II beta
           isoform 1 [Homo sapiens]
          Length = 666

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 28/105 (26%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 410 LKCPLHTVLKLTPVAYGCRVESIYLNVESVCTHRERSEDAKKGPNPLMRRNSVTPLASPE 469
           L CP        P A   R+  I  +V       E       GP P +    + PL+SP 
Sbjct: 432 LPCPSPAPFSPLP-APSPRISDILNSVRRGSGTPEAEGPLSAGPPPCLSPALLGPLSSPS 490

Query: 470 PTKKPRINSFEEHVASTSAALPS------CLPPEVPTQLPGQNMK 508
           P     +NS      +  A  PS      C  P +P  LP  + K
Sbjct: 491 PRISDILNSVRRGSGTPEAEGPSPVGPPPCPSPTIPGPLPTPSRK 535


>gi|87298935 engulfment and cell motility 3 [Homo sapiens]
          Length = 773

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 15/54 (27%), Positives = 28/54 (51%)

Query: 340 TYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQENVLVICHQAVLR 393
           TY E   LR+ ++ +          +L ++L+P +M L RQ+ +L +C   + R
Sbjct: 550 TYGEVLRLRQTERLHQEGTLAPPILELREKLKPELMGLIRQQRLLRLCEGTLFR 603


>gi|183396780 ubiquitin specific protease 20 [Homo sapiens]
          Length = 914

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 5/106 (4%)

Query: 17  VDHRPSLPRSCGPKLTNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRR 76
           +D RP L + C  ++T    + V+      G  +        +N          V E   
Sbjct: 610 LDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHE 669

Query: 77  EAVKQYSSYN-FFRPDNEEAMKVRKQ-CALAALRD---VKSYLAKE 117
             V+    Y  F+R  +EEAM+ R+Q  +LAA+R+   ++ Y+++E
Sbjct: 670 TVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSRE 715


>gi|183397136 ubiquitin specific protease 20 [Homo sapiens]
          Length = 914

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 5/106 (4%)

Query: 17  VDHRPSLPRSCGPKLTNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRR 76
           +D RP L + C  ++T    + V+      G  +        +N          V E   
Sbjct: 610 LDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHE 669

Query: 77  EAVKQYSSYN-FFRPDNEEAMKVRKQ-CALAALRD---VKSYLAKE 117
             V+    Y  F+R  +EEAM+ R+Q  +LAA+R+   ++ Y+++E
Sbjct: 670 TVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSRE 715


>gi|183397134 ubiquitin specific protease 20 [Homo sapiens]
          Length = 914

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 5/106 (4%)

Query: 17  VDHRPSLPRSCGPKLTNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRR 76
           +D RP L + C  ++T    + V+      G  +        +N          V E   
Sbjct: 610 LDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHE 669

Query: 77  EAVKQYSSYN-FFRPDNEEAMKVRKQ-CALAALRD---VKSYLAKE 117
             V+    Y  F+R  +EEAM+ R+Q  +LAA+R+   ++ Y+++E
Sbjct: 670 TVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSRE 715


>gi|24497589 aristaless related homeobox [Homo sapiens]
          Length = 562

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 453 PNPLMRRNSVTPL--ASPEPTKKPRINS-FEEHVASTSAALPSCLPPEVPTQLP 503
           P PL   + ++P   ASP P   P ++S +    A+ +AA PS  PP     LP
Sbjct: 401 PGPLSATHPLSPYLDASPFPPHHPALDSAWTAAAAAAAAAFPSLPPPPGSASLP 454


>gi|108860697 zinc finger protein 592 [Homo sapiens]
          Length = 1267

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 420 LTPVAYGC-RVESIYLNVESVCTHRERSEDAKKGPNPLMRRNSVTPLASPEPTKKPRINS 478
           L P  + C + +S ++N +S  +   + E  K  P P    N  +P++SPEP    + N 
Sbjct: 100 LPPDPHNCGKFDSTFMNGDSARSFPGKLEPPKSEPLPTF--NQFSPISSPEPEDPIKDNG 157

Query: 479 F 479
           F
Sbjct: 158 F 158


>gi|223005897 GPN-loop GTPase 1 isoform a [Homo sapiens]
          Length = 388

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 23 LPRSCGPKLTNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNV 71
          L  S GP+    P  ++++G+   GKT   ++LT +L+  G P  V N+
Sbjct: 24 LQASGGPR---HPVCLLVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINL 69


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,402,100
Number of Sequences: 37866
Number of extensions: 932949
Number of successful extensions: 2886
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2867
Number of HSP's gapped (non-prelim): 20
length of query: 520
length of database: 18,247,518
effective HSP length: 107
effective length of query: 413
effective length of database: 14,195,856
effective search space: 5862888528
effective search space used: 5862888528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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