Guide to the Human Genome
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Name: GHSR Sequence: fasta or formatted (289aa) NCBI GI: 4758434
Description:

growth hormone secretagogue receptor isoform 1b

Referenced in:

Growth Hormone and Related Hormones
Hypothalamus
Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [366aa] growth hormone secretagogue receptor isoform 1a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         21           1
 C cysteine            3.1          9           1
 D aspartate           4.2         12           1
 E glutamate           3.5         10           2
 F phenylalanine       6.6         19           3
 G glycine             6.2         18           2
 H histidine           0.7          2           1
 I isoleucine          3.5         10           1
 K lysine              2.4          7           1
 L leucine            16.3         47           2
 M methionine          2.1          6           1
 N asparagine          3.1          9           1
 P proline             4.8         14           1
 Q glutamine           2.1          6           1
 R arginine            6.2         18           4
 S serine              6.9         20           2
 T threonine           6.6         19           3
 V valine             10.0         29           3
 W tryptophan          2.8          8           1
 Y tyrosine            1.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth hormone secretagogue receptor isoform 1b [Homo... 
GHSR                  0.921   growth hormone secretagogue receptor isoform 1a [Hom...
MLNR                  0.384   motilin receptor 
NTSR1                 0.183   neurotensin receptor 1 
NMUR1                 0.170   neuromedin U receptor 1 
NMUR2                 0.151   neuromedin U receptor 2 
OPRK1                 0.145   opioid receptor, kappa 1 
QRFPR                 0.142   G protein-coupled receptor 103 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1B2 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1B3 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1B1 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1A 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1B4 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1O 
OPRM1                 0.136   opioid receptor, mu 1 isoform MOR-1X 
OPRL1                 0.133   opiate receptor-like 1 
OPRL1                 0.133   opiate receptor-like 1 
NTSR2                 0.133   neurotensin receptor 2 
OPRD1                 0.129   opioid receptor, delta 1 
GALR2                 0.115   galanin receptor 2 
CCKAR                 0.113   cholecystokinin A receptor 
SSTR5                 0.111   somatostatin receptor 5 
LPAR6                 0.111   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.111   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.111   G-protein coupled purinergic receptor P2Y5 
TRHR                  0.111   thyrotropin-releasing hormone receptor 
NPBWR1                0.109   G protein-coupled receptor 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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