Guide to the Human Genome
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Name: KITLG Sequence: fasta or formatted (245aa) NCBI GI: 4580420
Description:

KIT ligand isoform a precursor

Referenced in:

Neutrophils, Eosinophils, and Basophils
Hematopoiesis and Erythrocytes
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [273aa] KIT ligand isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         11           2
 C cysteine            2.0          5           1
 D aspartate           6.1         15           2
 E glutamate           7.3         18           2
 F phenylalanine       5.3         13           2
 G glycine             2.9          7           1
 H histidine           0.8          2           1
 I isoleucine          6.5         16           2
 K lysine              8.6         21           2
 L leucine            11.0         27           3
 M methionine          2.4          6           1
 N asparagine          5.7         14           2
 P proline             4.9         12           2
 Q glutamine           2.9          7           1
 R arginine            3.3          8           1
 S serine              9.4         23           2
 T threonine           4.9         12           1
 V valine              7.8         19           2
 W tryptophan          1.6          4           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KIT ligand isoform a precursor 
KITLG                 0.963   KIT ligand isoform b precursor 
CCPG1                 0.017   cell cycle progression 1 isoform 2 
CCPG1                 0.017   cell cycle progression 1 isoform 1 
LRDD                  0.013   leucine rich repeat and death domain containing prot...
LRDD                  0.013   leucine rich repeat and death domain containing prot...
LRDD                  0.013   leucine rich repeat and death domain containing prot...
APOB                  0.009   apolipoprotein B precursor 
HDGF2                 0.009   hepatoma-derived growth factor-related protein 2 iso...
HDGF2                 0.009   hepatoma-derived growth factor-related protein 2 iso...
FNBP1L                0.006   formin binding protein 1-like isoform 1 
FNBP1L                0.006   formin binding protein 1-like isoform 2 
LOC730429             0.006   PREDICTED: similar to ubiquitin protein ligase E3 c...
FSD1L                 0.006   fibronectin type III and SPRY domain containing 1-li...
OR5H1                 0.006   olfactory receptor, family 5, subfamily H, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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