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Search of human proteins with 45593132
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45593132 PRELI domain containing 2 isoform b [Homo sapiens]
(177 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45593132 PRELI domain containing 2 isoform b [Homo sapiens] 357 3e-99
gi|33667079 PRELI domain containing 2 isoform a [Homo sapiens] 348 1e-96
gi|33667034 PRELI domain containing 2 isoform c [Homo sapiens] 297 3e-81
gi|215490114 slowmo homolog 1 isoform 1 [Homo sapiens] 73 1e-13
gi|38678528 slowmo homolog 1 isoform 1 [Homo sapiens] 73 1e-13
gi|117553615 slowmo homolog 2 [Homo sapiens] 73 1e-13
gi|150010661 SEC14-like 5 [Homo sapiens] 61 4e-10
gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 60 1e-09
gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 60 1e-09
gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens] 60 1e-09
gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 60 1e-09
gi|7019509 PRELI domain containing 1 [Homo sapiens] 46 1e-05
gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens] 40 0.001
gi|8923958 B-cell translocation gene 4 [Homo sapiens] 32 0.29
gi|11225266 transient receptor potential cation channel, subfami... 27 7.1
gi|4506583 replication protein A1, 70kDa [Homo sapiens] 27 9.3
gi|23111036 sorting nexin 1 isoform c [Homo sapiens] 27 9.3
gi|23111032 sorting nexin 1 isoform b [Homo sapiens] 27 9.3
gi|23111034 sorting nexin 1 isoform a [Homo sapiens] 27 9.3
>gi|45593132 PRELI domain containing 2 isoform b [Homo sapiens]
Length = 177
Score = 357 bits (916), Expect = 3e-99
Identities = 177/177 (100%), Positives = 177/177 (100%)
Query: 1 MGVSVDVHQVYKYPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQ 60
MGVSVDVHQVYKYPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQ
Sbjct: 1 MGVSVDVHQVYKYPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQ 60
Query: 61 NVVPEILRKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMEN 120
NVVPEILRKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMEN
Sbjct: 61 NVVPEILRKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMEN 120
Query: 121 PNWTEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKEQCGAPLAE 177
PNWTEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKEQCGAPLAE
Sbjct: 121 PNWTEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKEQCGAPLAE 177
>gi|33667079 PRELI domain containing 2 isoform a [Homo sapiens]
Length = 189
Score = 348 bits (893), Expect = 1e-96
Identities = 177/189 (93%), Positives = 177/189 (93%), Gaps = 12/189 (6%)
Query: 1 MGVSVDVHQVYKYPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQ 60
MGVSVDVHQVYKYPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQ
Sbjct: 1 MGVSVDVHQVYKYPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQ 60
Query: 61 NVVPEILRK------------VSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASM 108
NVVPEILRK VSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASM
Sbjct: 61 NVVPEILRKSLSTLVILCWKKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASM 120
Query: 109 KEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLK 168
KEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLK
Sbjct: 121 KEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLK 180
Query: 169 EQCGAPLAE 177
EQCGAPLAE
Sbjct: 181 EQCGAPLAE 189
>gi|33667034 PRELI domain containing 2 isoform c [Homo sapiens]
Length = 148
Score = 297 bits (761), Expect = 3e-81
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 30 MDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQLEEESWLNPR 89
MDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQLEEESWLNPR
Sbjct: 1 MDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQLEEESWLNPR 60
Query: 90 ERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFAS 149
ERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFAS
Sbjct: 61 ERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFAS 120
Query: 150 TFLRQGAQKGIRIMEMLLKEQCGAPLAE 177
TFLRQGAQKGIRIMEMLLKEQCGAPLAE
Sbjct: 121 TFLRQGAQKGIRIMEMLLKEQCGAPLAE 148
>gi|215490114 slowmo homolog 1 isoform 1 [Homo sapiens]
Length = 172
Score = 73.2 bits (178), Expect = 1e-13
Identities = 42/159 (26%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
Query: 10 VYKYPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRK 69
V+ +P++ V+ + +RKYPNPM+ +V+ V ++ ++R + G ++ R+ + +P ++R
Sbjct: 9 VFGHPWDTVIQAAMRKYPNPMNPSVLGVDVL-QRRVDGRGRLHSLRLLSTEWGLPSLVRA 67
Query: 70 VSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQR 129
+ + E S ++P E+ M + S +T T S+ E V+ ENP T Q
Sbjct: 68 ILGTSRTLTYIREHSVVDPVEKKMELCSTNITLTNLVSVNERLVYTPHPENPEMTVLTQE 127
Query: 130 GRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLK 168
I++ G+ L LE+ + + A+KG +E +++
Sbjct: 128 AIITVKGIS-LGSYLESLMANTISSNAKKGWAAIEWIIE 165
>gi|38678528 slowmo homolog 1 isoform 1 [Homo sapiens]
Length = 172
Score = 73.2 bits (178), Expect = 1e-13
Identities = 42/159 (26%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
Query: 10 VYKYPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRK 69
V+ +P++ V+ + +RKYPNPM+ +V+ V ++ ++R + G ++ R+ + +P ++R
Sbjct: 9 VFGHPWDTVIQAAMRKYPNPMNPSVLGVDVL-QRRVDGRGRLHSLRLLSTEWGLPSLVRA 67
Query: 70 VSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQR 129
+ + E S ++P E+ M + S +T T S+ E V+ ENP T Q
Sbjct: 68 ILGTSRTLTYIREHSVVDPVEKKMELCSTNITLTNLVSVNERLVYTPHPENPEMTVLTQE 127
Query: 130 GRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLK 168
I++ G+ L LE+ + + A+KG +E +++
Sbjct: 128 AIITVKGIS-LGSYLESLMANTISSNAKKGWAAIEWIIE 165
>gi|117553615 slowmo homolog 2 [Homo sapiens]
Length = 194
Score = 72.8 bits (177), Expect = 1e-13
Identities = 41/158 (25%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 10 VYKYPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRK 69
V+ +P+E V + ++KYPNPM+ +V+ V +++ D S G ++ R+ + +P I++
Sbjct: 9 VFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHIDPS-GKLHSHRLLSTEWGLPSIVKS 67
Query: 70 VSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQR 129
+ ++E S ++P E+ M ++S +++T S+ E +++ ++P T Q
Sbjct: 68 LIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEKTVLTQE 127
Query: 130 GRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLL 167
I++ GV L+ LE ++ + A KG ME ++
Sbjct: 128 AIITVKGVS-LSSYLEGLMASTISSNASKGREAMEWVI 164
>gi|150010661 SEC14-like 5 [Homo sapiens]
Length = 696
Score = 61.2 bits (147), Expect = 4e-10
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Query: 9 QVYKYPFEQVVASFLRKYPN-PMDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEIL 67
+VYKYPFE V+A++ +++P P + +++ E R V +R + P +L
Sbjct: 10 RVYKYPFELVMAAYEKRFPTCPQIPVFLGSEVLRESRSPDGAVHVVERSCRLRVDAPRLL 69
Query: 68 RKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFI 127
RK++ V ++ + + LN +ER + I +H T+ + E + EN +WT F
Sbjct: 70 RKIA--GVEHVVFVQTNILNWKERTLLIEAHNETFANRVVVNEHCSYTVHPENEDWTCFE 127
Query: 128 QRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKE 169
Q + I LE A ++G ++E L E
Sbjct: 128 QSASLDIRSFFGFENALEKIAMKQYTANVKRGKEVIEHYLNE 169
>gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 60.1 bits (144), Expect = 1e-09
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 9 QVYKYPFEQVVASFLRKYPN-PMDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEIL 67
+VYKYPFE ++A++ R++P P+ + + E + E + +R P +L
Sbjct: 10 RVYKYPFELIMAAYERRFPTCPLIPMFVGSDTVNEFKSEDGAIHVIERRCKLDVDAPRLL 69
Query: 68 RKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFI 127
+K++ V + +++ LN RER + I ++ T++ + E + EN +WT F
Sbjct: 70 KKIA--GVDYVYFVQKNSLNSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDWTCFE 127
Query: 128 QRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKE 169
Q + I +E A +KG I+E L++
Sbjct: 128 QSASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQ 169
>gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 60.1 bits (144), Expect = 1e-09
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 9 QVYKYPFEQVVASFLRKYPN-PMDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEIL 67
+VYKYPFE ++A++ R++P P+ + + E + E + +R P +L
Sbjct: 10 RVYKYPFELIMAAYERRFPTCPLIPMFVGSDTVNEFKSEDGAIHVIERRCKLDVDAPRLL 69
Query: 68 RKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFI 127
+K++ V + +++ LN RER + I ++ T++ + E + EN +WT F
Sbjct: 70 KKIA--GVDYVYFVQKNSLNSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDWTCFE 127
Query: 128 QRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKE 169
Q + I +E A +KG I+E L++
Sbjct: 128 QSASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQ 169
>gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens]
Length = 719
Score = 60.1 bits (144), Expect = 1e-09
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 9 QVYKYPFEQVVASFLRKYPN-PMDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEIL 67
+VYKYPFE ++A++ R++P P+ + + E + E + +R P +L
Sbjct: 10 RVYKYPFELIMAAYERRFPTCPLIPMFVGSDTVNEFKSEDGAIHVIERRCKLDVDAPRLL 69
Query: 68 RKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFI 127
+K++ V + +++ LN RER + I ++ T++ + E + EN +WT F
Sbjct: 70 KKIA--GVDYVYFVQKNSLNSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDWTCFE 127
Query: 128 QRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKE 169
Q + I +E A +KG I+E L++
Sbjct: 128 QSASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQ 169
>gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 60.1 bits (144), Expect = 1e-09
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 9 QVYKYPFEQVVASFLRKYPN-PMDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEIL 67
+VYKYPFE ++A++ R++P P+ + + E + E + +R P +L
Sbjct: 10 RVYKYPFELIMAAYERRFPTCPLIPMFVGSDTVNEFKSEDGAIHVIERRCKLDVDAPRLL 69
Query: 68 RKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFI 127
+K++ V + +++ LN RER + I ++ T++ + E + EN +WT F
Sbjct: 70 KKIA--GVDYVYFVQKNSLNSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDWTCFE 127
Query: 128 QRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKE 169
Q + I +E A +KG I+E L++
Sbjct: 128 QSASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQ 169
>gi|7019509 PRELI domain containing 1 [Homo sapiens]
Length = 219
Score = 46.2 bits (108), Expect = 1e-05
Identities = 36/164 (21%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 10 VYKYPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRK 69
V + ++QV A+F ++YPNP K+V++ I+ + ++ R R+ N +P +
Sbjct: 10 VLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSR-RLLTKTNRMPRWAER 68
Query: 70 VSILKVP-NIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQ 128
+ V ++ + E+S ++P+ + M + + + ++E V+ + +N WTE +
Sbjct: 69 LFPANVAHSVYVLEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDNSGWTEIRR 128
Query: 129 RGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKEQCG 172
+S + G V E F + K ++ E +L + G
Sbjct: 129 EAWVSSSLFGVSRAVQE-FGLARFKSNVTKTMKGFEYILAKLQG 171
>gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens]
Length = 681
Score = 40.0 bits (92), Expect = 0.001
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 64 PEILRKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNW 123
P +L+K++ V + +++ LN RER + I ++ T++ + E + EN +W
Sbjct: 32 PRLLKKIA--GVDYVYFVQKNSLNSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDW 89
Query: 124 TEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKE 169
T F Q + I +E A +KG I+E L++
Sbjct: 90 TCFEQSASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQ 135
>gi|8923958 B-cell translocation gene 4 [Homo sapiens]
Length = 223
Score = 32.0 bits (71), Expect = 0.29
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 13 YPFEQVVASFLRKYPNPMDKNVISVKIMEEKRDESTGVIYRKRIAICQ-NVVPEILRKVS 71
+PF VASF ++ IS + D S+G + + V+P++ S
Sbjct: 110 HPF--TVASFKGRWEEWELYQQISYAVSRASSDVSSGTSCDEESCSKEPRVIPKVSNPKS 167
Query: 72 ILKVPNIQLEEESWLN-PRERNMAI-RSHCLTWTQYASMKEESVFRESM 118
I +V N++ +SWL PR++N+ R L T + S K +R +M
Sbjct: 168 IYQVENLKQPFQSWLQIPRKKNVVDGRVGLLGNTYHGSQKHPKCYRPAM 216
>gi|11225266 transient receptor potential cation channel, subfamily M,
member 5 [Homo sapiens]
Length = 1165
Score = 27.3 bits (59), Expect = 7.1
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
Query: 3 VSVDVHQVYKYPFEQVVASFLRKYPNPMDKNVIS---------VKIMEEKRDESTGVIYR 53
+S+ + +V+K E R P+P+D+ V++ + ME++R +S G + R
Sbjct: 1020 LSLTLRRVFKKEAEHKREHLERDLPDPLDQKVVTWETVQKENFLSKMEKRRRDSEGEVLR 1079
Query: 54 K 54
K
Sbjct: 1080 K 1080
>gi|4506583 replication protein A1, 70kDa [Homo sapiens]
Length = 616
Score = 26.9 bits (58), Expect = 9.3
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 72 ILKVPNIQLEEESWLNP-RERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRG 130
IL V +E W+ +E AI + K E F E +N N+ FI R
Sbjct: 515 ILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRV 574
Query: 131 RISI 134
R+ +
Sbjct: 575 RVKV 578
>gi|23111036 sorting nexin 1 isoform c [Homo sapiens]
Length = 474
Score = 26.9 bits (58), Expect = 9.3
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 27 PNPMDKNVISV-KIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQ--LEEE 83
P P +K++I + K+ K D S+ KR A + + I+ ++L+ P+++ LE+E
Sbjct: 209 PPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKE 268
>gi|23111032 sorting nexin 1 isoform b [Homo sapiens]
Length = 457
Score = 26.9 bits (58), Expect = 9.3
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 27 PNPMDKNVISV-KIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQ--LEEE 83
P P +K++I + K+ K D S+ KR A + + I+ ++L+ P+++ LE+E
Sbjct: 144 PPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKE 203
>gi|23111034 sorting nexin 1 isoform a [Homo sapiens]
Length = 522
Score = 26.9 bits (58), Expect = 9.3
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 27 PNPMDKNVISV-KIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQ--LEEE 83
P P +K++I + K+ K D S+ KR A + + I+ ++L+ P+++ LE+E
Sbjct: 209 PPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKE 268
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,427,556
Number of Sequences: 37866
Number of extensions: 256646
Number of successful extensions: 609
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 590
Number of HSP's gapped (non-prelim): 19
length of query: 177
length of database: 18,247,518
effective HSP length: 95
effective length of query: 82
effective length of database: 14,650,248
effective search space: 1201320336
effective search space used: 1201320336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.