Search of human proteins with 109150412

Search of human proteins with 109150412

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|109150412 hypothetical protein LOC85019 [Homo sapiens]
         (296 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|109150412 hypothetical protein LOC85019 [Homo sapiens]             599   e-171
gi|223029426 solute carrier family 35, member D2 [Homo sapiens]        64   2e-10
gi|56912198 solute carrier family 35, member D3 [Homo sapiens]         38   0.012
gi|116875819 taste receptor, type 2, member 39 [Homo sapiens]          32   0.87 
gi|198442844 dynein, axonemal, heavy chain 10 [Homo sapiens]           28   7.4  
gi|13375785 steroid 5 alpha-reductase 3 [Homo sapiens]                 28   7.4  
gi|187608784 transmembrane channel-like 6 [Homo sapiens]               28   7.4  
gi|187608791 transmembrane channel-like 6 [Homo sapiens]               28   7.4  
gi|16554564 caspase recruitment domain family, member 6 [Homo sa...    28   7.4  

>gi|109150412 hypothetical protein LOC85019 [Homo sapiens]
          Length = 296

 Score =  599 bits (1544), Expect = e-171
 Identities = 296/296 (100%), Positives = 296/296 (100%)

Query: 1   MCVRRSLVGLTFCTCYLASYLTNKYVLSVLKFTYPTLFQGWQTLIGGLLLHVSWKLGWVE 60
           MCVRRSLVGLTFCTCYLASYLTNKYVLSVLKFTYPTLFQGWQTLIGGLLLHVSWKLGWVE
Sbjct: 1   MCVRRSLVGLTFCTCYLASYLTNKYVLSVLKFTYPTLFQGWQTLIGGLLLHVSWKLGWVE 60

Query: 61  INSSSRSHVLVWLPASVLFVGIIYAGSRALSRLAIPVFLTLHNVAEVIICGYQKCFQKEK 120
           INSSSRSHVLVWLPASVLFVGIIYAGSRALSRLAIPVFLTLHNVAEVIICGYQKCFQKEK
Sbjct: 61  INSSSRSHVLVWLPASVLFVGIIYAGSRALSRLAIPVFLTLHNVAEVIICGYQKCFQKEK 120

Query: 121 TSPAKICSALLLLAAAGCLPFNDSQFNPDGYFWAIIHLLCVGAYKILQKSQKPSALSDID 180
           TSPAKICSALLLLAAAGCLPFNDSQFNPDGYFWAIIHLLCVGAYKILQKSQKPSALSDID
Sbjct: 121 TSPAKICSALLLLAAAGCLPFNDSQFNPDGYFWAIIHLLCVGAYKILQKSQKPSALSDID 180

Query: 181 QQYLNYIFSVVLLAFASHPTGDLFSVLDFPFLYFYRFHGSCCASGFLGFFLMFSTVKLKN 240
           QQYLNYIFSVVLLAFASHPTGDLFSVLDFPFLYFYRFHGSCCASGFLGFFLMFSTVKLKN
Sbjct: 181 QQYLNYIFSVVLLAFASHPTGDLFSVLDFPFLYFYRFHGSCCASGFLGFFLMFSTVKLKN 240

Query: 241 LLAPGQCAAWIFFAKIITAGLSILLFDAILTSATTGCLLLGALGEALLVFSERKSS 296
           LLAPGQCAAWIFFAKIITAGLSILLFDAILTSATTGCLLLGALGEALLVFSERKSS
Sbjct: 241 LLAPGQCAAWIFFAKIITAGLSILLFDAILTSATTGCLLLGALGEALLVFSERKSS 296


>gi|223029426 solute carrier family 35, member D2 [Homo sapiens]
          Length = 337

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 9/239 (3%)

Query: 3   VRRSLVGLTFCTCYLASYLTNKYVLSVLKFTYPTLFQGWQTLIGGLLLHVSWKLGWVEIN 62
           V R L  L + TC     L NK +L+   F  P      Q     ++L+VS     +   
Sbjct: 25  VARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFP 84

Query: 63  SSSRSHVLVWLPASVLFVGIIYAGSRALSRLAIPVFLTLHNVAEVIICGYQKCFQKEKTS 122
              +   +   P  +L+VG   +G  + S+L++P+F  L      +    +     ++ S
Sbjct: 85  DFDKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQYS 144

Query: 123 PAKICSALLLLAAAGCLPFNDSQFNPDGYFWAIIHLLCVGAYKILQKSQ-KPSALSDIDQ 181
              I S   ++  A     +D  FN +GY +  ++ +   A  +  K +  P  L     
Sbjct: 145 LNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGV 204

Query: 182 QYLNYIFSVVLLAFASHPTGDLFSVLDF----PFLYFYRFHGSCCASGFLGFFLMFSTV 236
            + N  F ++     S  TGDL    +F      ++  +F  SC    FLGF LM+STV
Sbjct: 205 LFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSC----FLGFLLMYSTV 259


>gi|56912198 solute carrier family 35, member D3 [Homo sapiens]
          Length = 416

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 39/189 (20%), Positives = 75/189 (39%), Gaps = 2/189 (1%)

Query: 24  KYVLSVLKFTYPTLFQGWQTLIGGLLLHVSWKLGWVEINSSSRSHVLVWLPASVLFVGII 83
           K+++S  +F++ TL Q   +    L L +  +LG + +     S    +   +VL     
Sbjct: 30  KFLISRYQFSFLTLVQCLTSSTAALSLELLRRLGLIAVPPFGLSLARSFAGVAVLSTLQS 89

Query: 84  YAGSRALSRLAIPVFLTLHNVAEVIICGYQKCFQKEKT-SPAKICSALLLLAAAGCLPFN 142
                +L  L++P+++       ++         K    SP  + + L+    A      
Sbjct: 90  SLTLWSLRGLSLPMYVVFKRCLPLVTMLIGVLVLKNGAPSPGVLAAVLITTCGAALAGAG 149

Query: 143 DSQFNPDGYFWAIIHLLCVGAYKIL-QKSQKPSALSDIDQQYLNYIFSVVLLAFASHPTG 201
           D   +P GY   ++ +L   AY +L QK+   +    +  QY+  + +  LL   S  + 
Sbjct: 150 DLTGDPIGYVTGVLAVLVHAAYLVLIQKASADTEHGPLTAQYVIAVSATPLLVICSFAST 209

Query: 202 DLFSVLDFP 210
           D      FP
Sbjct: 210 DSIHAWTFP 218


>gi|116875819 taste receptor, type 2, member 39 [Homo sapiens]
          Length = 338

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 6   SLVGLTFCTCYLASYLTNKYVLSVLKFTYPTLFQGWQTLIGGLLLHVSWKLGWVEINSS 64
           S + L FC+ + A++L+  Y + +  F+YP LF   +  I GL+  + W   ++  + S
Sbjct: 116 SFIFLNFCSLWFAAWLSFFYFVKIANFSYP-LFLKLRWRITGLIPWLLWLSVFISFSHS 173


>gi|198442844 dynein, axonemal, heavy chain 10 [Homo sapiens]
          Length = 4471

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 8/110 (7%)

Query: 78   LFVGIIYAGSRALSRLAIPVFLTLHNVAEVIIC-GY-QKCFQKEKTSPAKICSALLLLAA 135
            L VG+  +G ++LSRLA   F     V E+++  GY +  F+++  S   +   L +   
Sbjct: 2800 LLVGVGGSGKQSLSRLA--AFTASCEVFEILLSRGYSENSFREDLKS---LYLKLGIENK 2854

Query: 136  AGCLPFNDSQFNPDGYFWAIIHLLCVGAYKIL-QKSQKPSALSDIDQQYL 184
            A    F D+    +G+   I ++L  G    L  + +K S LS I Q+ L
Sbjct: 2855 AMIFLFTDAHVAEEGFLELINNMLTSGIVPALFSEEEKESILSQIGQEAL 2904


>gi|13375785 steroid 5 alpha-reductase 3 [Homo sapiens]
          Length = 318

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 72  WLPASVLFVGI--IYAGSRALSRLAIPVFLTLHNVAEVIICGYQKCFQKEKTSPAKICSA 129
           WL   +  +G      G  ALS   + VFL LH++  +  C Y   F        + C  
Sbjct: 107 WLHGLLRILGAAQFQGGELALSAFLVLVFLWLHSLRRLFECLYVSVFSNVMIHVVQYCFG 166

Query: 130 LLLLAAAG 137
           L+     G
Sbjct: 167 LVYYVLVG 174


>gi|187608784 transmembrane channel-like 6 [Homo sapiens]
          Length = 805

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 93  LAIPVFLTLHNVAEVIICGYQKCFQKEKTSPAKICSALLLLAAAGC 138
           LA    L L  VA   I G Q  F      PA +C+ L LL  AGC
Sbjct: 256 LAFNALLLLLLVA--FIMGPQVAFPPALPGPAPVCTGLELLTGAGC 299


>gi|187608791 transmembrane channel-like 6 [Homo sapiens]
          Length = 805

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 93  LAIPVFLTLHNVAEVIICGYQKCFQKEKTSPAKICSALLLLAAAGC 138
           LA    L L  VA   I G Q  F      PA +C+ L LL  AGC
Sbjct: 256 LAFNALLLLLLVA--FIMGPQVAFPPALPGPAPVCTGLELLTGAGC 299


>gi|16554564 caspase recruitment domain family, member 6 [Homo
           sapiens]
          Length = 1037

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 5/47 (10%)

Query: 15  CYLASYLTNKYVLSVLKFTYPTLFQGW--QTLIGGLLLHVSWKLGWV 59
           C L+  L N Y   V +   P L   W   T IGG   HVS K  WV
Sbjct: 709 CELSQNLQNLYGTPVFR---PVLENSWLFPTRIGGNFNHVSLKASWV 752


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.142    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,603,628
Number of Sequences: 37866
Number of extensions: 433661
Number of successful extensions: 954
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 950
Number of HSP's gapped (non-prelim): 9
length of query: 296
length of database: 18,247,518
effective HSP length: 102
effective length of query: 194
effective length of database: 14,385,186
effective search space: 2790726084
effective search space used: 2790726084
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.