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Search of human proteins with 4507949
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507949 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, beta polypeptide [Homo sapiens]
(246 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507949 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase a... 484 e-137
gi|21328448 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase ... 484 e-137
gi|208973244 tyrosine 3/tryptophan 5 -monooxygenase activation p... 421 e-118
gi|208973242 tyrosine 3/tryptophan 5 -monooxygenase activation p... 421 e-118
gi|208973240 tyrosine 3/tryptophan 5 -monooxygenase activation p... 421 e-118
gi|208973238 tyrosine 3/tryptophan 5 -monooxygenase activation p... 421 e-118
gi|21735625 tyrosine 3/tryptophan 5 -monooxygenase activation pr... 421 e-118
gi|4507953 tyrosine 3/tryptophan 5 -monooxygenase activation pro... 421 e-118
gi|5803227 tyrosine 3/tryptophan 5 -monooxygenase activation pro... 398 e-111
gi|21464101 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase ... 360 e-100
gi|4507951 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase a... 355 2e-98
gi|5454052 stratifin [Homo sapiens] 328 3e-90
gi|5803225 tyrosine 3/tryptophan 5 -monooxygenase activation pro... 313 9e-86
gi|50083293 coiled-coil domain containing 123 [Homo sapiens] 34 0.10
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 33 0.23
gi|183583565 TBC1 domain family, member 3 [Homo sapiens] 33 0.30
gi|183583567 TBC1 domain family, member 3E [Homo sapiens] 33 0.30
gi|183583563 TBC1 domain family, member 3D [Homo sapiens] 33 0.30
gi|226693407 TBC1 domain family, member 3H [Homo sapiens] 32 0.39
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 32 0.39
gi|149999613 TBC1 domain family, member 3B [Homo sapiens] 32 0.39
gi|90577185 TBC1 domain family member 3C [Homo sapiens] 32 0.39
gi|157502205 TBC1 domain family, member 3G [Homo sapiens] 32 0.39
gi|148233596 LPS-responsive vesicle trafficking, beach and ancho... 32 0.66
gi|207452735 epiplakin 1 [Homo sapiens] 31 0.86
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 31 1.1
gi|45505178 cancer antigen 1 [Homo sapiens] 31 1.1
gi|46240864 sperm associated antigen 17 [Homo sapiens] 31 1.1
gi|4504919 keratin 8 [Homo sapiens] 30 1.5
gi|4758012 clathrin heavy chain 1 [Homo sapiens] 30 1.5
>gi|4507949 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, beta polypeptide [Homo sapiens]
Length = 246
Score = 484 bits (1247), Expect = e-137
Identities = 246/246 (100%), Positives = 246/246 (100%)
Query: 1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 60
MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 60
Query: 61 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 120
WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY
Sbjct: 61 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 120
Query: 121 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 180
LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY
Sbjct: 121 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 180
Query: 181 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240
YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD
Sbjct: 181 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240
Query: 241 AGEGEN 246
AGEGEN
Sbjct: 241 AGEGEN 246
>gi|21328448 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, beta polypeptide [Homo sapiens]
Length = 246
Score = 484 bits (1247), Expect = e-137
Identities = 246/246 (100%), Positives = 246/246 (100%)
Query: 1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 60
MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSS 60
Query: 61 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 120
WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY
Sbjct: 61 WRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 120
Query: 121 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 180
LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY
Sbjct: 121 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 180
Query: 181 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240
YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD
Sbjct: 181 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240
Query: 241 AGEGEN 246
AGEGEN
Sbjct: 241 AGEGEN 246
>gi|208973244 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 421 bits (1083), Expect = e-118
Identities = 212/242 (87%), Positives = 228/242 (94%)
Query: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 122
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 123 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 182
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 183 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAG 242
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ QGDE +AG
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 243 EG 244
EG
Sbjct: 241 EG 242
>gi|208973242 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 421 bits (1083), Expect = e-118
Identities = 212/242 (87%), Positives = 228/242 (94%)
Query: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 122
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 123 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 182
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 183 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAG 242
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ QGDE +AG
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 243 EG 244
EG
Sbjct: 241 EG 242
>gi|208973240 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 421 bits (1083), Expect = e-118
Identities = 212/242 (87%), Positives = 228/242 (94%)
Query: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 122
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 123 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 182
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 183 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAG 242
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ QGDE +AG
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 243 EG 244
EG
Sbjct: 241 EG 242
>gi|208973238 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 421 bits (1083), Expect = e-118
Identities = 212/242 (87%), Positives = 228/242 (94%)
Query: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 122
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 123 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 182
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 183 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAG 242
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ QGDE +AG
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 243 EG 244
EG
Sbjct: 241 EG 242
>gi|21735625 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 421 bits (1083), Expect = e-118
Identities = 212/242 (87%), Positives = 228/242 (94%)
Query: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 122
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 123 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 182
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 183 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAG 242
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ QGDE +AG
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 243 EG 244
EG
Sbjct: 241 EG 242
>gi|4507953 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 421 bits (1083), Expect = e-118
Identities = 212/242 (87%), Positives = 228/242 (94%)
Query: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
MDK+ELVQKAKLAEQAERYDDMAA MK+VTEQG ELSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 122
V+SSIEQKTE EKKQQM +EYREKIE EL+DICNDVL LL+K+LIPNA+Q ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 123 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 182
MKGDY+RYL+EVA+GD+K+ V SQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 183 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAG 242
ILNSPEKACSLAKTAFDEAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ QGDE +AG
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 243 EG 244
EG
Sbjct: 241 EG 242
>gi|5803227 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, theta polypeptide [Homo sapiens]
Length = 245
Score = 398 bits (1023), Expect = e-111
Identities = 198/242 (81%), Positives = 222/242 (91%)
Query: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 122
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 123 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 182
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 183 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAG 242
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS++ G+E DA
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA 240
Query: 243 EG 244
EG
Sbjct: 241 EG 242
>gi|21464101 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, gamma polypeptide [Homo sapiens]
Length = 247
Score = 360 bits (923), Expect = e-100
Identities = 187/248 (75%), Positives = 212/248 (85%), Gaps = 6/248 (2%)
Query: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
+D+ +LVQKA+LAEQAERYDDMAAAMK VTE LSNEERNLLSVAYKNVVGARRSSWR
Sbjct: 2 VDREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWR 61
Query: 63 VISSIEQKT--ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNA--TQPESKV 118
VISSIEQKT + NEKK +M + YREKIE EL+ +C DVL LLD YLI N TQ ESKV
Sbjct: 62 VISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKV 121
Query: 119 FYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSV 178
FYLKMKGDY+RYL+EVA+G+ + T V +S++AY EA EISK+ MQPTHPIRLGLALN+SV
Sbjct: 122 FYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSV 181
Query: 179 FYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDE 238
FYYEI N+PE+AC LAKTAFD+AIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS+ Q D+
Sbjct: 182 FYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDD 241
Query: 239 GDAGEGEN 246
G GEG N
Sbjct: 242 G--GEGNN 247
>gi|4507951 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, eta polypeptide [Homo sapiens]
Length = 246
Score = 355 bits (912), Expect = 2e-98
Identities = 185/245 (75%), Positives = 211/245 (86%), Gaps = 6/245 (2%)
Query: 4 DKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRV 63
D+ +L+Q+A+LAEQAERYDDMA+AMKAVTE LSNE+RNLLSVAYKNVVGARRSSWRV
Sbjct: 3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRV 62
Query: 64 ISSIEQKT--ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNAT--QPESKVF 119
ISSIEQKT + NEKK + K YREKIE EL+ +CNDVL LLDK+LI N Q ESKVF
Sbjct: 63 ISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESKVF 122
Query: 120 YLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVF 179
YLKMKGDY+RYL+EVASG+ K + V S+ AY+EAFEISK++MQPTHPIRLGLALNFSVF
Sbjct: 123 YLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFSVF 182
Query: 180 YYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEG 239
YYEI N+PE+AC LAK AFD+AIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS+ Q +E
Sbjct: 183 YYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEE- 241
Query: 240 DAGEG 244
AGEG
Sbjct: 242 -AGEG 245
>gi|5454052 stratifin [Homo sapiens]
Length = 248
Score = 328 bits (840), Expect = 3e-90
Identities = 164/239 (68%), Positives = 203/239 (84%), Gaps = 2/239 (0%)
Query: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
M+++ L+QKAKLAEQAERY+DMAA MK E+G ELS EERNLLSVAYKNVVG +R++WR
Sbjct: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
Query: 63 VISSIEQKT--ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 120
V+SSIEQK+ E +E+K +EYREK+E ELQ +C+ VL LLD +LI A ES+VFY
Sbjct: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
Query: 121 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 180
LKMKGDY+RYL+EVA+GD+K+ + +++ AYQEA +ISKKEM PT+PIRLGLALNFSVF+
Sbjct: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
Query: 181 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEG 239
YEI NSPE+A SLAKT FDEA+A+L TL+E+SYKDSTLIMQLLRDNLTLWT++N G+EG
Sbjct: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEG 239
>gi|5803225 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, epsilon polypeptide [Homo sapiens]
Length = 255
Score = 313 bits (802), Expect = 9e-86
Identities = 162/245 (66%), Positives = 196/245 (80%), Gaps = 6/245 (2%)
Query: 4 DKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRV 63
D+ +LV +AKLAEQAERYD+M +MK V EL+ EERNLLSVAYKNV+GARR+SWR+
Sbjct: 3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRI 62
Query: 64 ISSIEQKTERN--EKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYL 121
ISSIEQK E E K +M +EYR+ +E EL+ IC D+L++LDK+LIP A ESKVFY
Sbjct: 63 ISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYY 122
Query: 122 KMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYY 181
KMKGDY RYL+E A+G++++ NS AY+ A +I+ E+ PTHPIRLGLALNFSVFYY
Sbjct: 123 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 182
Query: 182 EILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDA 241
EILNSP++AC LAK AFD+AIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ QGD
Sbjct: 183 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGD---- 238
Query: 242 GEGEN 246
GE +N
Sbjct: 239 GEEQN 243
>gi|50083293 coiled-coil domain containing 123 [Homo sapiens]
Length = 783
Score = 34.3 bits (77), Expect = 0.10
Identities = 44/231 (19%), Positives = 93/231 (40%), Gaps = 18/231 (7%)
Query: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
+ K E ++A++ E E+ + A K++ + + L+ E+ L + R S +
Sbjct: 524 LQKEEEKERAEMEELMEKLTVLQAQKKSLLLEKNSLT-EQNKALEAELERAQKINRKSQK 582
Query: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICN--DVLELLDKYLIPNATQPESKVFY 120
I ++++ E+ + +Y + ++I D L L K L +KV
Sbjct: 583 KIEVLKKQVEKAMGNEMSAHQYLANLVGLAENITQERDSLMCLAKCLESEKDGVLNKVIK 642
Query: 121 LKMKGDYFRYLSEVASGDNKQTTVSN---SQQAYQEAFEISKKEMQPTHPIRLGLALNFS 177
++ L E G KQ + S + ++ + + K Q +R
Sbjct: 643 SNIR---LGKLEEKVKGYKKQAALKLGDISHRLLEQQEDFAGKTAQYRQEMR-------- 691
Query: 178 VFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLT 228
+++L ++ A E EL+ + E +++++ I +LL+D LT
Sbjct: 692 -HLHQVLKDKQEVLDQALQQNREMEGELEVIWESTFRENRRIRELLQDTLT 741
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 33.1 bits (74), Expect = 0.23
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 10 QKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQ 69
Q KLA++ + +D A + E S K++ + +I+ +E+
Sbjct: 986 QNCKLAKEKKLLEDRIAEFTTNLTEEEEKS-----------KSLAKLKNKHEAMITDLEE 1034
Query: 70 KTERNEKKQQMGKEYREKIEAELQDICNDVLEL 102
+ R EK++Q ++ R K+E + D+ + + EL
Sbjct: 1035 RLRREEKQRQELEKTRRKLEGDSTDLSDQIAEL 1067
Score = 27.7 bits (60), Expect = 9.5
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 17/99 (17%)
Query: 1 MTMDKSELVQKAKLAEQAE-RYDDMAAAMKAVTE---QGHELSNEERNLLSVAYKNVVGA 56
M EL + + E A+ R + AMKA E QG + +EE+ K +V
Sbjct: 1537 MKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEKK------KQLV-- 1588
Query: 57 RRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDI 95
R + +E + E K++ M R+K+E +L+D+
Sbjct: 1589 -----RQVREMEAELEDERKQRSMAVAARKKLEMDLKDL 1622
>gi|183583565 TBC1 domain family, member 3 [Homo sapiens]
Length = 549
Score = 32.7 bits (73), Expect = 0.30
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 37 ELSNEERNLLSVAYKNV-VGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDI 95
E R L+ AYK + + R W V+ +IE+ +N + Q+ KE ++ +Q I
Sbjct: 86 EKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRI 145
Query: 96 CNDVLELLDKYL 107
DV L K++
Sbjct: 146 DRDVSGTLRKHI 157
>gi|183583567 TBC1 domain family, member 3E [Homo sapiens]
Length = 549
Score = 32.7 bits (73), Expect = 0.30
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 37 ELSNEERNLLSVAYKNV-VGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDI 95
E R L+ AYK + + R W V+ +IE+ +N + Q+ KE ++ +Q I
Sbjct: 86 EKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRI 145
Query: 96 CNDVLELLDKYL 107
DV L K++
Sbjct: 146 DRDVSGTLRKHI 157
>gi|183583563 TBC1 domain family, member 3D [Homo sapiens]
Length = 549
Score = 32.7 bits (73), Expect = 0.30
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 37 ELSNEERNLLSVAYKNV-VGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDI 95
E R L+ AYK + + R W V+ +IE+ +N + Q+ KE ++ +Q I
Sbjct: 86 EKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRI 145
Query: 96 CNDVLELLDKYL 107
DV L K++
Sbjct: 146 DRDVSGTLRKHI 157
>gi|226693407 TBC1 domain family, member 3H [Homo sapiens]
Length = 549
Score = 32.3 bits (72), Expect = 0.39
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 37 ELSNEERNLLSVAYKNV-VGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDI 95
E R L+ AYK + + R W V+ +IE+ +N + Q+ KE ++ +Q I
Sbjct: 86 EKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRI 145
Query: 96 CNDVLELLDKYL 107
D+ L K++
Sbjct: 146 DRDISGTLRKHM 157
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 32.3 bits (72), Expect = 0.39
Identities = 42/193 (21%), Positives = 73/193 (37%), Gaps = 17/193 (8%)
Query: 33 EQGHEL--SNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNE--KKQQMGKEYREKI 88
E+GH L S E+ +V Y A R + +EQ E +K+ M E +
Sbjct: 3743 EKGHSLLKSAREKGERAVKYLEEGEAERLRKEIHDHMEQLKELTSTVRKEHMTLEKGLHL 3802
Query: 89 EAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQ 148
E D C + + + +Y E K+ + K +Y S Q TV + +
Sbjct: 3803 AKEFSDKCKALTQWIAEYQEILHVPEEPKMELYEKKAQLSKYKS-------LQQTVLSHE 3855
Query: 149 QAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTL 208
+ + E + ++ + L ++ ++ + + CS+ K +E D L
Sbjct: 3856 PSVKSVREKGEALLELVQDVTLKDKID------QLQSDYQDLCSIGKAMMEEIAGFEDRL 3909
Query: 209 NEESYKDSTLIMQ 221
N K TLI Q
Sbjct: 3910 NNLQMKGDTLIGQ 3922
>gi|149999613 TBC1 domain family, member 3B [Homo sapiens]
Length = 549
Score = 32.3 bits (72), Expect = 0.39
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 37 ELSNEERNLLSVAYKNV-VGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDI 95
E R L+ AYK + + R W V+ +IE+ +N + Q+ KE ++ +Q I
Sbjct: 86 EKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRI 145
Query: 96 CNDVLELLDKYL 107
D+ L K++
Sbjct: 146 DRDISGTLRKHM 157
>gi|90577185 TBC1 domain family member 3C [Homo sapiens]
Length = 549
Score = 32.3 bits (72), Expect = 0.39
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 37 ELSNEERNLLSVAYKNV-VGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDI 95
E R L+ AYK + + R W V+ +IE+ +N + Q+ KE ++ +Q I
Sbjct: 86 EKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRI 145
Query: 96 CNDVLELLDKYL 107
D+ L K++
Sbjct: 146 DRDISGTLRKHM 157
>gi|157502205 TBC1 domain family, member 3G [Homo sapiens]
Length = 549
Score = 32.3 bits (72), Expect = 0.39
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 37 ELSNEERNLLSVAYKNV-VGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDI 95
E R L+ AYK + + R W V+ +IE+ +N + Q+ KE ++ +Q I
Sbjct: 86 EKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRI 145
Query: 96 CNDVLELLDKYL 107
D+ L K++
Sbjct: 146 DRDISGTLRKHM 157
>gi|148233596 LPS-responsive vesicle trafficking, beach and anchor
containing [Homo sapiens]
Length = 2863
Score = 31.6 bits (70), Expect = 0.66
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 13/78 (16%)
Query: 61 WRVISSIEQKTERNEK--------KQQMGKEYREKIEAELQDICNDVLELLDKYLIPNAT 112
W + ++I +K+ RN + ++ +GK EK++ + D+ D+L +L Y N T
Sbjct: 111 WSMFTAILKKSIRNLQVCTEVGLVEKVLGKI--EKVDNMIADLLVDMLGVLASY---NLT 165
Query: 113 QPESKVFYLKMKGDYFRY 130
E K+F+ K++GD R+
Sbjct: 166 VRELKLFFSKLQGDKGRW 183
>gi|207452735 epiplakin 1 [Homo sapiens]
Length = 5090
Score = 31.2 bits (69), Expect = 0.86
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 13/108 (12%)
Query: 7 ELVQKAKLAEQAERYDDMAAAM----KAVTEQGHELSNEERNLLSVAYKNVV-----GAR 57
E V +L E+ +D + KA + H + +E R L + G +
Sbjct: 2061 EKVSYRELQERCRPQEDTGWVLFPVNKAARDSEH-IDDETRRALEAEQVEITVGRFRGQK 2119
Query: 58 RSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDK 105
+ W +++S E TE EKK Q+ + YR LQ + +LEL++K
Sbjct: 2120 PTLWALLNS-EYVTE--EKKLQLVRMYRTHTRRALQTVAQLILELIEK 2164
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 30.8 bits (68), Expect = 1.1
Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 53/261 (20%)
Query: 13 KLAEQAERYDDMAAAMKAVTEQGHELSNE---------------ERNLLSVAYKNVVGAR 57
KL E E + MK + + E+ + ER + ++ KN G
Sbjct: 636 KLKELVEENKQLEEGMKEILQAIKEMQKDPDVKGGETSLIIPSLERLVNAIESKNAEGIF 695
Query: 58 RSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLEL--LDKYL-------- 107
+S + + ++Q T RNE+ +Q +E R++ Q + L++ L+K
Sbjct: 696 DASLHLKAQVDQLTGRNEELRQELRESRKEAINYSQQLAKANLKIDHLEKETSLLRQSEG 755
Query: 108 ---------IPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEIS 158
+P+ P S L E+ + + K + +S + Y F +
Sbjct: 756 SNVVFKGIDLPDGIAPSSASIINSQNEYLIHLLQELENKEKKLKNLEDSLEDYNRKFAVI 815
Query: 159 KKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEA-----IAELDTLNEESY 213
+ + S+ Y E L+ E + +KT +E + D + + Y
Sbjct: 816 RHQQ--------------SLLYKEYLSEKETWKTESKTIKEEKRKLEDQVQQDAIKVKEY 861
Query: 214 KDSTLIMQLLRDNLTLWTSEN 234
+ +Q+ D + +EN
Sbjct: 862 NNLLNALQMDSDEMKKILAEN 882
>gi|45505178 cancer antigen 1 [Homo sapiens]
Length = 641
Score = 30.8 bits (68), Expect = 1.1
Identities = 33/187 (17%), Positives = 78/187 (41%), Gaps = 8/187 (4%)
Query: 36 HELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDI 95
++L L+ YK ++ + + + + ++E+ +K Q + +E ++ + + I
Sbjct: 219 NKLKENVEELIEDKYK-IILEKNDTKKTLQNLEEVLANTQKHLQESRNDKEMLQLQFKKI 277
Query: 96 CNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAF 155
+ + L ++Y+ + +S YL+M + EV + Q ++A A
Sbjct: 278 KANYVCLQERYMTEMQQKNKSVSQYLEMDKTLSKKEEEV---ERLQQLKKELEKATASAL 334
Query: 156 EISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKD 215
++ K+E + L L F E L +K K+ ++ + ++ L S +
Sbjct: 335 DLLKREKEAQEQEFLSLQEEFQKLEKENLEERQK----LKSRLEKLLTQVRNLQFMSENE 390
Query: 216 STLIMQL 222
T ++L
Sbjct: 391 RTKNIKL 397
>gi|46240864 sperm associated antigen 17 [Homo sapiens]
Length = 2223
Score = 30.8 bits (68), Expect = 1.1
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
+ K+E+ + K E+ + + ++KA E+ H L+ EER L G +
Sbjct: 912 ISKTEISDQEKEKEKEKIPFILEGSLKAWKEEQHRLAEEER-LREEKKAEKKGKEAGKKK 970
Query: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 120
+ E++ R+ KK+ KE ++ + ++Q++ + + QPE K+ Y
Sbjct: 971 GKDNAEKEDSRSLKKKSPYKEKSKEEQVKIQEVTEE-----------SPHQPEPKITY 1017
>gi|4504919 keratin 8 [Homo sapiens]
Length = 483
Score = 30.4 bits (67), Expect = 1.5
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 7/164 (4%)
Query: 1 MTMDKSE-LVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRS 59
++MD S L + +AE +Y+D+A +A E +++ EE L S+A K+ RR+
Sbjct: 246 LSMDNSRSLDMDSIIAEVKAQYEDIANRSRAEAESMYQIKYEE--LQSLAGKHGDDLRRT 303
Query: 60 SWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVF 119
IS + + R + + + K R +EA + D EL K NA E +
Sbjct: 304 KTE-ISEMNRNISRLQAEIEGLKGQRASLEAAIAD-AEQRGELAIK--DANAKLSELEAA 359
Query: 120 YLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQ 163
+ K D R L E N + + Y++ E + ++
Sbjct: 360 LQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLE 403
>gi|4758012 clathrin heavy chain 1 [Homo sapiens]
Length = 1675
Score = 30.4 bits (67), Expect = 1.5
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 94 DICNDVLELLDKYLIPNATQPESK-----VFYLKMKGDYFRYLSEVASGDNKQ----TTV 144
D+ N+++ELL+K ++ N+ E + + +K D R + + DN +
Sbjct: 999 DLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANI 1058
Query: 145 SNSQQAYQEAFEISKKEMQPTHPIRLGLA----LNFSVFYYEILNSPEKACSLAKTAFDE 200
+ S + ++EAF I +K T +++ + L+ + + E N P LAK +
Sbjct: 1059 AISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQK 1118
Query: 201 AIAE 204
+ +
Sbjct: 1119 GMVK 1122
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.126 0.339
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,205,247
Number of Sequences: 37866
Number of extensions: 322924
Number of successful extensions: 1404
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 1347
Number of HSP's gapped (non-prelim): 122
length of query: 246
length of database: 18,247,518
effective HSP length: 100
effective length of query: 146
effective length of database: 14,460,918
effective search space: 2111294028
effective search space used: 2111294028
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.