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Search of human proteins with 4507265
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507265 stanniocalcin 1 precursor [Homo sapiens]
(247 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507265 stanniocalcin 1 precursor [Homo sapiens] 493 e-140
gi|4507267 stanniocalcin 2 precursor [Homo sapiens] 136 1e-32
gi|38505222 thioredoxin domain containing 10 [Homo sapiens] 30 1.5
gi|4502285 ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H... 29 3.3
gi|24638454 ATPase, Ca++ transporting, slow twitch 2 isoform 1 [... 29 3.3
gi|209413709 ATPase, Ca++ transporting, slow twitch 2 isoform 3 ... 29 3.3
gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens] 29 4.3
gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens] 29 4.3
gi|7656971 phosphonoformate immuno-associated protein 5 isoform ... 28 7.4
gi|116235485 delta-notch-like EGF repeat-containing transmembran... 28 7.4
gi|239751049 PREDICTED: similar to ATPase, Ca++ transporting, fa... 28 9.6
gi|10835220 ATPase, Ca++ transporting, fast twitch 1 isoform b [... 28 9.6
gi|27886529 ATPase, Ca++ transporting, fast twitch 1 isoform a [... 28 9.6
gi|65507403 SEC15-like 1 isoform a [Homo sapiens] 28 9.6
gi|62243652 SEC15-like 1 isoform b [Homo sapiens] 28 9.6
>gi|4507265 stanniocalcin 1 precursor [Homo sapiens]
Length = 247
Score = 493 bits (1268), Expect = e-140
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MLQNSAVLLVLVISASATHEAEQNDSVSPRKSRVAAQNSAEVVRCLNSALQVGCGAFACL 60
MLQNSAVLLVLVISASATHEAEQNDSVSPRKSRVAAQNSAEVVRCLNSALQVGCGAFACL
Sbjct: 1 MLQNSAVLLVLVISASATHEAEQNDSVSPRKSRVAAQNSAEVVRCLNSALQVGCGAFACL 60
Query: 61 ENSTCDTDGMYDICKSFLYSAAKFDTQGKAFVKESLKCIANGVTSKVFLAIRRCSTFQRM 120
ENSTCDTDGMYDICKSFLYSAAKFDTQGKAFVKESLKCIANGVTSKVFLAIRRCSTFQRM
Sbjct: 61 ENSTCDTDGMYDICKSFLYSAAKFDTQGKAFVKESLKCIANGVTSKVFLAIRRCSTFQRM 120
Query: 121 IAEVQEECYSKLNVCSIAKRNPEAITEVVQLPNHFSNRYYNRLVRSLLECDEDTVSTIRD 180
IAEVQEECYSKLNVCSIAKRNPEAITEVVQLPNHFSNRYYNRLVRSLLECDEDTVSTIRD
Sbjct: 121 IAEVQEECYSKLNVCSIAKRNPEAITEVVQLPNHFSNRYYNRLVRSLLECDEDTVSTIRD 180
Query: 181 SLMEKIGPNMASLFHILQTDHCAQTHPRADFNRRRTNEPQKLKVLLRNLRGEEDSPSHIK 240
SLMEKIGPNMASLFHILQTDHCAQTHPRADFNRRRTNEPQKLKVLLRNLRGEEDSPSHIK
Sbjct: 181 SLMEKIGPNMASLFHILQTDHCAQTHPRADFNRRRTNEPQKLKVLLRNLRGEEDSPSHIK 240
Query: 241 RTSHESA 247
RTSHESA
Sbjct: 241 RTSHESA 247
>gi|4507267 stanniocalcin 2 precursor [Homo sapiens]
Length = 302
Score = 136 bits (343), Expect = 1e-32
Identities = 65/173 (37%), Positives = 103/173 (59%)
Query: 25 DSVSPRKSRVAAQNSAEVVRCLNSALQVGCGAFACLENSTCDTDGMYDICKSFLYSAAKF 84
D S +K R++ QN+AE+ CL +A VGCG F C EN++C+ G++ IC +FL++A KF
Sbjct: 36 DRSSQQKGRLSLQNTAEIQHCLVNAGDVGCGVFECFENNSCEIRGLHGICMTFLHNAGKF 95
Query: 85 DTQGKAFVKESLKCIANGVTSKVFLAIRRCSTFQRMIAEVQEECYSKLNVCSIAKRNPEA 144
D QGK+F+K++LKC A+ + + R+C + M++++Q ECY K ++C+ A+ N
Sbjct: 96 DAQGKSFIKDALKCKAHALRHRFGCISRKCPAIREMVSQLQRECYLKHDLCAAAQENTRV 155
Query: 145 ITEVVQLPNHFSNRYYNRLVRSLLECDEDTVSTIRDSLMEKIGPNMASLFHIL 197
I E++ + + Y LV LL C E+ I S+ + N SL IL
Sbjct: 156 IVEMIHFKDLLLHEPYVDLVNLLLTCGEEVKEAITHSVQVQCEQNWGSLCSIL 208
>gi|38505222 thioredoxin domain containing 10 [Homo sapiens]
Length = 454
Score = 30.4 bits (67), Expect = 1.5
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 18 THEAEQNDSVSPRKSRVAAQNSAEVVRCLNSALQVGCGAFA---------CLENSTCDTD 68
T EA+ DS+ R R+ + +V S+ +GC F C T DTD
Sbjct: 343 TVEAQGGDSILQRLKRIVFDAKSTIVSIFKSSPLMGCFLFGLPLGVISIMCYGIYTADTD 402
Query: 69 GMYDICKSFLYSAAKFDTQGKAFVKES 95
G Y Y +K + + + ++ES
Sbjct: 403 GGY---IEERYEVSKSENENQEQIEES 426
>gi|4502285 ATPase, Ca++ transporting, slow twitch 2 isoform 2 [Homo
sapiens]
Length = 997
Score = 29.3 bits (64), Expect = 3.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 33 RVAAQNSAEVVRCLNSALQVGCGAFACLENSTCDTDGMYDICKSFLYSAAKFDT 86
R+A +N+ +VR L S +GC + C + + T +C+ F+ + DT
Sbjct: 325 RMAKKNA--IVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFILDRVEGDT 376
>gi|24638454 ATPase, Ca++ transporting, slow twitch 2 isoform 1
[Homo sapiens]
Length = 1042
Score = 29.3 bits (64), Expect = 3.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 33 RVAAQNSAEVVRCLNSALQVGCGAFACLENSTCDTDGMYDICKSFLYSAAKFDT 86
R+A +N+ +VR L S +GC + C + + T +C+ F+ + DT
Sbjct: 325 RMAKKNA--IVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFILDRVEGDT 376
>gi|209413709 ATPase, Ca++ transporting, slow twitch 2 isoform 3
[Homo sapiens]
Length = 1015
Score = 29.3 bits (64), Expect = 3.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 33 RVAAQNSAEVVRCLNSALQVGCGAFACLENSTCDTDGMYDICKSFLYSAAKFDT 86
R+A +N+ +VR L S +GC + C + + T +C+ F+ + DT
Sbjct: 298 RMAKKNA--IVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFILDRVEGDT 349
>gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens]
Length = 1424
Score = 28.9 bits (63), Expect = 4.3
Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 206 HPRADFNRRRTNEPQKLKV-LLRNLRGEE 233
HPRA+ R RTN P++L++ L + L+G++
Sbjct: 1154 HPRANIMRPRTNTPKQLRMQLQQRLQGQQ 1182
>gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens]
Length = 1420
Score = 28.9 bits (63), Expect = 4.3
Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 206 HPRADFNRRRTNEPQKLKV-LLRNLRGEE 233
HPRA+ R RTN P++L++ L + L+G++
Sbjct: 1154 HPRANIMRPRTNTPKQLRMQLQQRLQGQQ 1182
>gi|7656971 phosphonoformate immuno-associated protein 5 isoform 2
[Homo sapiens]
Length = 583
Score = 28.1 bits (61), Expect = 7.4
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Query: 200 DHCAQTHPRAD------FNRRRTNEPQKLKVLLRNLRG 231
DHC H D F + N+ QKL +LLR L G
Sbjct: 375 DHCMDKHNGTDRFVNQQFQEEKLNKLQKLLILLRGLPG 412
>gi|116235485 delta-notch-like EGF repeat-containing transmembrane
[Homo sapiens]
Length = 737
Score = 28.1 bits (61), Expect = 7.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 54 CGAFACLENSTCDTDGMYDIC 74
C +CL +TCD+DG+ C
Sbjct: 547 CANVSCLNGATCDSDGLNGTC 567
>gi|239751049 PREDICTED: similar to ATPase, Ca++ transporting, fast
twitch 1 [Homo sapiens]
Length = 879
Score = 27.7 bits (60), Expect = 9.6
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 33 RVAAQNSAEVVRCLNSALQVGCGAFACLENSTCDTDGMYDICKSFL 78
R+A +N+ +VR L S +GC + C + + T +CK F+
Sbjct: 580 RMAKKNA--IVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFI 623
>gi|10835220 ATPase, Ca++ transporting, fast twitch 1 isoform b
[Homo sapiens]
Length = 994
Score = 27.7 bits (60), Expect = 9.6
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 33 RVAAQNSAEVVRCLNSALQVGCGAFACLENSTCDTDGMYDICKSFL 78
R+A +N+ +VR L S +GC + C + + T +CK F+
Sbjct: 325 RMAKKNA--IVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFI 368
>gi|27886529 ATPase, Ca++ transporting, fast twitch 1 isoform a
[Homo sapiens]
Length = 1001
Score = 27.7 bits (60), Expect = 9.6
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 33 RVAAQNSAEVVRCLNSALQVGCGAFACLENSTCDTDGMYDICKSFL 78
R+A +N+ +VR L S +GC + C + + T +CK F+
Sbjct: 325 RMAKKNA--IVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFI 368
>gi|65507403 SEC15-like 1 isoform a [Homo sapiens]
Length = 804
Score = 27.7 bits (60), Expect = 9.6
Identities = 43/160 (26%), Positives = 63/160 (39%), Gaps = 31/160 (19%)
Query: 111 IRRCSTFQRMIAEVQE---------ECYSKLNVCSIAKRNPEAITEVVQLPNHF-----S 156
I RC QR I V E E YSKL AKR A+ + QL N +
Sbjct: 115 IIRCRIQQRNITTVVEKLQLCLPVLEMYSKLKEQMSAKRYYSALKTMEQLENVYFPWVSQ 174
Query: 157 NRYYNRLVRSLLECDED----TVSTIRDSL------MEKIGPN-MASLFH------ILQT 199
R+ ++ +L + ED ++S ++D L +KIG M H LQ
Sbjct: 175 YRFCQLMIENLPKLREDIKEISMSDLKDFLESIRKHSDKIGETAMKQAQHQKTFSVSLQK 234
Query: 200 DHCAQTHPRADFNRRRTNEPQKLKVLLRNLRGEEDSPSHI 239
+ + NR R E + VL +L E+++ I
Sbjct: 235 QNKMKFGKNMYINRDRIPEERNETVLKHSLEEEDENEEEI 274
>gi|62243652 SEC15-like 1 isoform b [Homo sapiens]
Length = 799
Score = 27.7 bits (60), Expect = 9.6
Identities = 43/160 (26%), Positives = 63/160 (39%), Gaps = 31/160 (19%)
Query: 111 IRRCSTFQRMIAEVQE---------ECYSKLNVCSIAKRNPEAITEVVQLPNHF-----S 156
I RC QR I V E E YSKL AKR A+ + QL N +
Sbjct: 110 IIRCRIQQRNITTVVEKLQLCLPVLEMYSKLKEQMSAKRYYSALKTMEQLENVYFPWVSQ 169
Query: 157 NRYYNRLVRSLLECDED----TVSTIRDSL------MEKIGPN-MASLFH------ILQT 199
R+ ++ +L + ED ++S ++D L +KIG M H LQ
Sbjct: 170 YRFCQLMIENLPKLREDIKEISMSDLKDFLESIRKHSDKIGETAMKQAQHQKTFSVSLQK 229
Query: 200 DHCAQTHPRADFNRRRTNEPQKLKVLLRNLRGEEDSPSHI 239
+ + NR R E + VL +L E+++ I
Sbjct: 230 QNKMKFGKNMYINRDRIPEERNETVLKHSLEEEDENEEEI 269
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.129 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,530,330
Number of Sequences: 37866
Number of extensions: 328256
Number of successful extensions: 831
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 821
Number of HSP's gapped (non-prelim): 16
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.