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Search of human proteins with 4505883
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505883 plasminogen-like B2 [Homo sapiens]
(96 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|74048573 plasminogen-like B1 [Homo sapiens] 194 1e-50
gi|4505883 plasminogen-like B2 [Homo sapiens] 194 1e-50
gi|4505881 plasminogen [Homo sapiens] 185 8e-48
gi|22035663 lipoprotein, Lp(a)-like 2 precursor [Homo sapiens] 34 0.022
gi|13346502 lipoprotein, Lp(a)-like 2 precursor [Homo sapiens] 34 0.022
gi|116292750 lipoprotein Lp(a) precursor [Homo sapiens] 34 0.022
gi|58533167 hepatocyte growth factor isoform 5 precursor [Homo s... 33 0.038
gi|58533165 hepatocyte growth factor isoform 4 precursor [Homo s... 33 0.038
gi|58533170 hepatocyte growth factor isoform 3 precursor [Homo s... 33 0.038
gi|58533163 hepatocyte growth factor isoform 2 precursor [Homo s... 33 0.038
gi|33859835 hepatocyte growth factor isoform 1 preproprotein [Ho... 33 0.038
gi|56549093 B-cell receptor-associated protein BAP29 isoform a [... 31 0.19
gi|56549091 B-cell receptor-associated protein BAP29 isoform b [... 31 0.19
gi|26667199 calcium/calmodulin-dependent protein kinase II gamma... 26 6.0
gi|26667191 calcium/calmodulin-dependent protein kinase II gamma... 26 6.0
gi|26667211 calcium/calmodulin-dependent protein kinase II gamma... 26 6.0
gi|26667203 calcium/calmodulin-dependent protein kinase II gamma... 26 6.0
gi|26667196 calcium/calmodulin-dependent protein kinase II gamma... 26 6.0
gi|110611226 UNC13 (C. elegans)-like [Homo sapiens] 26 6.0
gi|239753253 PREDICTED: hypothetical protein XP_002345598 [Homo ... 26 7.8
gi|239747834 PREDICTED: hypothetical protein XP_002348325 [Homo ... 26 7.8
gi|239741700 PREDICTED: hypothetical protein XP_002342276 [Homo ... 26 7.8
gi|70167127 carbonic anhydrase VI precursor [Homo sapiens] 26 7.8
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 26 7.8
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 26 7.8
>gi|74048573 plasminogen-like B1 [Homo sapiens]
Length = 96
Score = 194 bits (493), Expect = 1e-50
Identities = 96/96 (100%), Positives = 96/96 (100%)
Query: 1 MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT 60
MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT
Sbjct: 1 MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT 60
Query: 61 CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK 96
CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK
Sbjct: 61 CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK 96
>gi|4505883 plasminogen-like B2 [Homo sapiens]
Length = 96
Score = 194 bits (493), Expect = 1e-50
Identities = 96/96 (100%), Positives = 96/96 (100%)
Query: 1 MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT 60
MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT
Sbjct: 1 MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT 60
Query: 61 CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK 96
CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK
Sbjct: 61 CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK 96
>gi|4505881 plasminogen [Homo sapiens]
Length = 810
Score = 185 bits (469), Expect = 8e-48
Identities = 92/96 (95%), Positives = 93/96 (96%)
Query: 1 MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT 60
MEHKEVVLLLLLFLKSGQGEPLDDYVNTQG SLFSVTKKQLGAGS EECAAKCEED+EFT
Sbjct: 1 MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGASLFSVTKKQLGAGSIEECAAKCEEDEEFT 60
Query: 61 CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK 96
CRAFQYHSKEQQCVIMAENRKSSIIIRMRD VLFEK
Sbjct: 61 CRAFQYHSKEQQCVIMAENRKSSIIIRMRDVVLFEK 96
>gi|22035663 lipoprotein, Lp(a)-like 2 precursor [Homo sapiens]
Length = 132
Score = 34.3 bits (77), Expect = 0.022
Identities = 17/20 (85%), Positives = 17/20 (85%)
Query: 1 MEHKEVVLLLLLFLKSGQGE 20
MEHKEVVLLLLLFLKS E
Sbjct: 1 MEHKEVVLLLLLFLKSAPTE 20
>gi|13346502 lipoprotein, Lp(a)-like 2 precursor [Homo sapiens]
Length = 132
Score = 34.3 bits (77), Expect = 0.022
Identities = 17/20 (85%), Positives = 17/20 (85%)
Query: 1 MEHKEVVLLLLLFLKSGQGE 20
MEHKEVVLLLLLFLKS E
Sbjct: 1 MEHKEVVLLLLLFLKSAPTE 20
>gi|116292750 lipoprotein Lp(a) precursor [Homo sapiens]
Length = 2040
Score = 34.3 bits (77), Expect = 0.022
Identities = 17/20 (85%), Positives = 17/20 (85%)
Query: 1 MEHKEVVLLLLLFLKSGQGE 20
MEHKEVVLLLLLFLKS E
Sbjct: 1 MEHKEVVLLLLLFLKSAAPE 20
>gi|58533167 hepatocyte growth factor isoform 5 precursor [Homo
sapiens]
Length = 210
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 31 PSLFSVTKKQLGAGSREECAAKCEEDK--EFTCRAFQYHSKEQQCVIMAENRKSS 83
P+L TKK + ++CA +C +K FTC+AF + +QC+ N SS
Sbjct: 55 PALKIKTKK---VNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS 106
>gi|58533165 hepatocyte growth factor isoform 4 precursor [Homo
sapiens]
Length = 285
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 31 PSLFSVTKKQLGAGSREECAAKCEEDK--EFTCRAFQYHSKEQQCVIMAENRKSS 83
P+L TKK + ++CA +C +K FTC+AF + +QC+ N SS
Sbjct: 55 PALKIKTKK---VNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS 106
>gi|58533170 hepatocyte growth factor isoform 3 precursor [Homo
sapiens]
Length = 723
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 31 PSLFSVTKKQLGAGSREECAAKCEEDK--EFTCRAFQYHSKEQQCVIMAENRKSS 83
P+L TKK + ++CA +C +K FTC+AF + +QC+ N SS
Sbjct: 55 PALKIKTKK---VNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS 106
>gi|58533163 hepatocyte growth factor isoform 2 precursor [Homo
sapiens]
Length = 290
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 31 PSLFSVTKKQLGAGSREECAAKCEEDK--EFTCRAFQYHSKEQQCVIMAENRKSS 83
P+L TKK + ++CA +C +K FTC+AF + +QC+ N SS
Sbjct: 55 PALKIKTKK---VNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS 106
>gi|33859835 hepatocyte growth factor isoform 1 preproprotein [Homo
sapiens]
Length = 728
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 31 PSLFSVTKKQLGAGSREECAAKCEEDK--EFTCRAFQYHSKEQQCVIMAENRKSS 83
P+L TKK + ++CA +C +K FTC+AF + +QC+ N SS
Sbjct: 55 PALKIKTKK---VNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS 106
>gi|56549093 B-cell receptor-associated protein BAP29 isoform a
[Homo sapiens]
Length = 348
Score = 31.2 bits (69), Expect = 0.19
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 43 AGSREECAAKCEEDKEFTCRAFQYHSKEQQCVIMAENRK 81
A + + A K E+ E R + H K+++CV+ AEN+K
Sbjct: 141 AENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKK 179
>gi|56549091 B-cell receptor-associated protein BAP29 isoform b
[Homo sapiens]
Length = 241
Score = 31.2 bits (69), Expect = 0.19
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 43 AGSREECAAKCEEDKEFTCRAFQYHSKEQQCVIMAENRK 81
A + + A K E+ E R + H K+++CV+ AEN+K
Sbjct: 141 AENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKK 179
>gi|26667199 calcium/calmodulin-dependent protein kinase II gamma
isoform 3 [Homo sapiens]
Length = 518
Score = 26.2 bits (56), Expect = 6.0
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 23 DDY--VNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQ-CVIMAEN 79
DDY G FSV ++ + S +E AAK K+ + R Q +E + C ++
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLL--- 68
Query: 80 RKSSIIIRMRDAV 92
K I+R+ D++
Sbjct: 69 -KHPNIVRLHDSI 80
>gi|26667191 calcium/calmodulin-dependent protein kinase II gamma
isoform 4 [Homo sapiens]
Length = 495
Score = 26.2 bits (56), Expect = 6.0
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 23 DDY--VNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQ-CVIMAEN 79
DDY G FSV ++ + S +E AAK K+ + R Q +E + C ++
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLL--- 68
Query: 80 RKSSIIIRMRDAV 92
K I+R+ D++
Sbjct: 69 -KHPNIVRLHDSI 80
>gi|26667211 calcium/calmodulin-dependent protein kinase II gamma
isoform 6 [Homo sapiens]
Length = 504
Score = 26.2 bits (56), Expect = 6.0
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 23 DDY--VNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQ-CVIMAEN 79
DDY G FSV ++ + S +E AAK K+ + R Q +E + C ++
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLL--- 68
Query: 80 RKSSIIIRMRDAV 92
K I+R+ D++
Sbjct: 69 -KHPNIVRLHDSI 80
>gi|26667203 calcium/calmodulin-dependent protein kinase II gamma
isoform 1 [Homo sapiens]
Length = 556
Score = 26.2 bits (56), Expect = 6.0
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 23 DDY--VNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQ-CVIMAEN 79
DDY G FSV ++ + S +E AAK K+ + R Q +E + C ++
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLL--- 68
Query: 80 RKSSIIIRMRDAV 92
K I+R+ D++
Sbjct: 69 -KHPNIVRLHDSI 80
>gi|26667196 calcium/calmodulin-dependent protein kinase II gamma
isoform 2 [Homo sapiens]
Length = 527
Score = 26.2 bits (56), Expect = 6.0
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 23 DDY--VNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQ-CVIMAEN 79
DDY G FSV ++ + S +E AAK K+ + R Q +E + C ++
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLL--- 68
Query: 80 RKSSIIIRMRDAV 92
K I+R+ D++
Sbjct: 69 -KHPNIVRLHDSI 80
>gi|110611226 UNC13 (C. elegans)-like [Homo sapiens]
Length = 1591
Score = 26.2 bits (56), Expect = 6.0
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 48 ECAAKCEEDKEFTCRA-FQYHSKEQQCVIMAENRKSSIIIRMRD 90
EC KC E + A + E+ C AE+R +II+ M+D
Sbjct: 510 ECGVKCHEKCQDLLNADCLQRAAEKSCKHGAEDRTQNIIMAMKD 553
>gi|239753253 PREDICTED: hypothetical protein XP_002345598 [Homo
sapiens]
Length = 188
Score = 25.8 bits (55), Expect = 7.8
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 32 SLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQCV 74
S SV +G G R+ ++ EE+++F Q+ + +C+
Sbjct: 44 SAVSVWHASMGPGQRDPQISEAEEERQFEASLLQFKRQFLKCL 86
>gi|239747834 PREDICTED: hypothetical protein XP_002348325 [Homo
sapiens]
Length = 188
Score = 25.8 bits (55), Expect = 7.8
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 32 SLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQCV 74
S SV +G G R+ ++ EE+++F Q+ + +C+
Sbjct: 44 SAVSVWHASMGPGQRDPQISEAEEERQFEASLLQFKRQFLKCL 86
>gi|239741700 PREDICTED: hypothetical protein XP_002342276 [Homo
sapiens]
Length = 188
Score = 25.8 bits (55), Expect = 7.8
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 32 SLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQCV 74
S SV +G G R+ ++ EE+++F Q+ + +C+
Sbjct: 44 SAVSVWHASMGPGQRDPQISEAEEERQFEASLLQFKRQFLKCL 86
>gi|70167127 carbonic anhydrase VI precursor [Homo sapiens]
Length = 308
Score = 25.8 bits (55), Expect = 7.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 4 KEVVLLLLLFLKSGQGEPLDDYVNTQG 30
+ +VLLL LFL GQ + + D+ ++G
Sbjct: 2 RALVLLLSLFLLGGQAQHVSDWTYSEG 28
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 25.8 bits (55), Expect = 7.8
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 22 LDDYVNT--QGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQCVIMAEN 79
++DYV+ Q F K + REE AA+ + KE + + KE+Q + +
Sbjct: 602 IEDYVDILRQAKQEFRELKAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLKEDE 661
Query: 80 RKSS 83
+++S
Sbjct: 662 QRNS 665
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 25.8 bits (55), Expect = 7.8
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 22 LDDYVNT--QGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQCVIMAEN 79
++DYV+ Q F K + REE AA+ + KE + + KE+Q + +
Sbjct: 634 IEDYVDILRQAKQEFRELKAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLKEDE 693
Query: 80 RKSS 83
+++S
Sbjct: 694 QRNS 697
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,621,123
Number of Sequences: 37866
Number of extensions: 142483
Number of successful extensions: 291
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 279
Number of HSP's gapped (non-prelim): 25
length of query: 96
length of database: 18,247,518
effective HSP length: 67
effective length of query: 29
effective length of database: 15,710,496
effective search space: 455604384
effective search space used: 455604384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.