Guide to the Human Genome
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Search of human proteins with 4505883

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4505883 plasminogen-like B2 [Homo sapiens]
         (96 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|74048573 plasminogen-like B1 [Homo sapiens]                        194   1e-50
gi|4505883 plasminogen-like B2 [Homo sapiens]                         194   1e-50
gi|4505881 plasminogen [Homo sapiens]                                 185   8e-48
gi|22035663 lipoprotein, Lp(a)-like 2 precursor [Homo sapiens]         34   0.022
gi|13346502 lipoprotein, Lp(a)-like 2 precursor [Homo sapiens]         34   0.022
gi|116292750 lipoprotein Lp(a) precursor [Homo sapiens]                34   0.022
gi|58533167 hepatocyte growth factor isoform 5 precursor [Homo s...    33   0.038
gi|58533165 hepatocyte growth factor isoform 4 precursor [Homo s...    33   0.038
gi|58533170 hepatocyte growth factor isoform 3 precursor [Homo s...    33   0.038
gi|58533163 hepatocyte growth factor isoform 2 precursor [Homo s...    33   0.038
gi|33859835 hepatocyte growth factor isoform 1 preproprotein [Ho...    33   0.038
gi|56549093 B-cell receptor-associated protein BAP29 isoform a [...    31   0.19 
gi|56549091 B-cell receptor-associated protein BAP29 isoform b [...    31   0.19 
gi|26667199 calcium/calmodulin-dependent protein kinase II gamma...    26   6.0  
gi|26667191 calcium/calmodulin-dependent protein kinase II gamma...    26   6.0  
gi|26667211 calcium/calmodulin-dependent protein kinase II gamma...    26   6.0  
gi|26667203 calcium/calmodulin-dependent protein kinase II gamma...    26   6.0  
gi|26667196 calcium/calmodulin-dependent protein kinase II gamma...    26   6.0  
gi|110611226 UNC13 (C. elegans)-like [Homo sapiens]                    26   6.0  
gi|239753253 PREDICTED: hypothetical protein XP_002345598 [Homo ...    26   7.8  
gi|239747834 PREDICTED: hypothetical protein XP_002348325 [Homo ...    26   7.8  
gi|239741700 PREDICTED: hypothetical protein XP_002342276 [Homo ...    26   7.8  
gi|70167127 carbonic anhydrase VI precursor [Homo sapiens]             26   7.8  
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo...    26   7.8  
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo...    26   7.8  

>gi|74048573 plasminogen-like B1 [Homo sapiens]
          Length = 96

 Score =  194 bits (493), Expect = 1e-50
 Identities = 96/96 (100%), Positives = 96/96 (100%)

Query: 1  MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT 60
          MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT
Sbjct: 1  MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT 60

Query: 61 CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK 96
          CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK
Sbjct: 61 CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK 96


>gi|4505883 plasminogen-like B2 [Homo sapiens]
          Length = 96

 Score =  194 bits (493), Expect = 1e-50
 Identities = 96/96 (100%), Positives = 96/96 (100%)

Query: 1  MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT 60
          MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT
Sbjct: 1  MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT 60

Query: 61 CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK 96
          CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK
Sbjct: 61 CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK 96


>gi|4505881 plasminogen [Homo sapiens]
          Length = 810

 Score =  185 bits (469), Expect = 8e-48
 Identities = 92/96 (95%), Positives = 93/96 (96%)

Query: 1  MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFT 60
          MEHKEVVLLLLLFLKSGQGEPLDDYVNTQG SLFSVTKKQLGAGS EECAAKCEED+EFT
Sbjct: 1  MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGASLFSVTKKQLGAGSIEECAAKCEEDEEFT 60

Query: 61 CRAFQYHSKEQQCVIMAENRKSSIIIRMRDAVLFEK 96
          CRAFQYHSKEQQCVIMAENRKSSIIIRMRD VLFEK
Sbjct: 61 CRAFQYHSKEQQCVIMAENRKSSIIIRMRDVVLFEK 96


>gi|22035663 lipoprotein, Lp(a)-like 2 precursor [Homo sapiens]
          Length = 132

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 17/20 (85%), Positives = 17/20 (85%)

Query: 1  MEHKEVVLLLLLFLKSGQGE 20
          MEHKEVVLLLLLFLKS   E
Sbjct: 1  MEHKEVVLLLLLFLKSAPTE 20


>gi|13346502 lipoprotein, Lp(a)-like 2 precursor [Homo sapiens]
          Length = 132

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 17/20 (85%), Positives = 17/20 (85%)

Query: 1  MEHKEVVLLLLLFLKSGQGE 20
          MEHKEVVLLLLLFLKS   E
Sbjct: 1  MEHKEVVLLLLLFLKSAPTE 20


>gi|116292750 lipoprotein Lp(a) precursor [Homo sapiens]
          Length = 2040

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 17/20 (85%), Positives = 17/20 (85%)

Query: 1  MEHKEVVLLLLLFLKSGQGE 20
          MEHKEVVLLLLLFLKS   E
Sbjct: 1  MEHKEVVLLLLLFLKSAAPE 20


>gi|58533167 hepatocyte growth factor isoform 5 precursor [Homo
           sapiens]
          Length = 210

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 31  PSLFSVTKKQLGAGSREECAAKCEEDK--EFTCRAFQYHSKEQQCVIMAENRKSS 83
           P+L   TKK     + ++CA +C  +K   FTC+AF +    +QC+    N  SS
Sbjct: 55  PALKIKTKK---VNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS 106


>gi|58533165 hepatocyte growth factor isoform 4 precursor [Homo
           sapiens]
          Length = 285

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 31  PSLFSVTKKQLGAGSREECAAKCEEDK--EFTCRAFQYHSKEQQCVIMAENRKSS 83
           P+L   TKK     + ++CA +C  +K   FTC+AF +    +QC+    N  SS
Sbjct: 55  PALKIKTKK---VNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS 106


>gi|58533170 hepatocyte growth factor isoform 3 precursor [Homo
           sapiens]
          Length = 723

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 31  PSLFSVTKKQLGAGSREECAAKCEEDK--EFTCRAFQYHSKEQQCVIMAENRKSS 83
           P+L   TKK     + ++CA +C  +K   FTC+AF +    +QC+    N  SS
Sbjct: 55  PALKIKTKK---VNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS 106


>gi|58533163 hepatocyte growth factor isoform 2 precursor [Homo
           sapiens]
          Length = 290

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 31  PSLFSVTKKQLGAGSREECAAKCEEDK--EFTCRAFQYHSKEQQCVIMAENRKSS 83
           P+L   TKK     + ++CA +C  +K   FTC+AF +    +QC+    N  SS
Sbjct: 55  PALKIKTKK---VNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS 106


>gi|33859835 hepatocyte growth factor isoform 1 preproprotein [Homo
           sapiens]
          Length = 728

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 31  PSLFSVTKKQLGAGSREECAAKCEEDK--EFTCRAFQYHSKEQQCVIMAENRKSS 83
           P+L   TKK     + ++CA +C  +K   FTC+AF +    +QC+    N  SS
Sbjct: 55  PALKIKTKK---VNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS 106


>gi|56549093 B-cell receptor-associated protein BAP29 isoform a
           [Homo sapiens]
          Length = 348

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 14/39 (35%), Positives = 23/39 (58%)

Query: 43  AGSREECAAKCEEDKEFTCRAFQYHSKEQQCVIMAENRK 81
           A +  + A K  E+ E   R  + H K+++CV+ AEN+K
Sbjct: 141 AENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKK 179


>gi|56549091 B-cell receptor-associated protein BAP29 isoform b
           [Homo sapiens]
          Length = 241

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 14/39 (35%), Positives = 23/39 (58%)

Query: 43  AGSREECAAKCEEDKEFTCRAFQYHSKEQQCVIMAENRK 81
           A +  + A K  E+ E   R  + H K+++CV+ AEN+K
Sbjct: 141 AENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKK 179


>gi|26667199 calcium/calmodulin-dependent protein kinase II gamma
          isoform 3 [Homo sapiens]
          Length = 518

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 23 DDY--VNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQ-CVIMAEN 79
          DDY      G   FSV ++ +   S +E AAK    K+ + R  Q   +E + C ++   
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLL--- 68

Query: 80 RKSSIIIRMRDAV 92
           K   I+R+ D++
Sbjct: 69 -KHPNIVRLHDSI 80


>gi|26667191 calcium/calmodulin-dependent protein kinase II gamma
          isoform 4 [Homo sapiens]
          Length = 495

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 23 DDY--VNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQ-CVIMAEN 79
          DDY      G   FSV ++ +   S +E AAK    K+ + R  Q   +E + C ++   
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLL--- 68

Query: 80 RKSSIIIRMRDAV 92
           K   I+R+ D++
Sbjct: 69 -KHPNIVRLHDSI 80


>gi|26667211 calcium/calmodulin-dependent protein kinase II gamma
          isoform 6 [Homo sapiens]
          Length = 504

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 23 DDY--VNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQ-CVIMAEN 79
          DDY      G   FSV ++ +   S +E AAK    K+ + R  Q   +E + C ++   
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLL--- 68

Query: 80 RKSSIIIRMRDAV 92
           K   I+R+ D++
Sbjct: 69 -KHPNIVRLHDSI 80


>gi|26667203 calcium/calmodulin-dependent protein kinase II gamma
          isoform 1 [Homo sapiens]
          Length = 556

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 23 DDY--VNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQ-CVIMAEN 79
          DDY      G   FSV ++ +   S +E AAK    K+ + R  Q   +E + C ++   
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLL--- 68

Query: 80 RKSSIIIRMRDAV 92
           K   I+R+ D++
Sbjct: 69 -KHPNIVRLHDSI 80


>gi|26667196 calcium/calmodulin-dependent protein kinase II gamma
          isoform 2 [Homo sapiens]
          Length = 527

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 23 DDY--VNTQGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQ-CVIMAEN 79
          DDY      G   FSV ++ +   S +E AAK    K+ + R  Q   +E + C ++   
Sbjct: 12 DDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLL--- 68

Query: 80 RKSSIIIRMRDAV 92
           K   I+R+ D++
Sbjct: 69 -KHPNIVRLHDSI 80


>gi|110611226 UNC13 (C. elegans)-like [Homo sapiens]
          Length = 1591

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 48  ECAAKCEEDKEFTCRA-FQYHSKEQQCVIMAENRKSSIIIRMRD 90
           EC  KC E  +    A     + E+ C   AE+R  +II+ M+D
Sbjct: 510 ECGVKCHEKCQDLLNADCLQRAAEKSCKHGAEDRTQNIIMAMKD 553


>gi|239753253 PREDICTED: hypothetical protein XP_002345598 [Homo
          sapiens]
          Length = 188

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 32 SLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQCV 74
          S  SV    +G G R+   ++ EE+++F     Q+  +  +C+
Sbjct: 44 SAVSVWHASMGPGQRDPQISEAEEERQFEASLLQFKRQFLKCL 86


>gi|239747834 PREDICTED: hypothetical protein XP_002348325 [Homo
          sapiens]
          Length = 188

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 32 SLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQCV 74
          S  SV    +G G R+   ++ EE+++F     Q+  +  +C+
Sbjct: 44 SAVSVWHASMGPGQRDPQISEAEEERQFEASLLQFKRQFLKCL 86


>gi|239741700 PREDICTED: hypothetical protein XP_002342276 [Homo
          sapiens]
          Length = 188

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 32 SLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQCV 74
          S  SV    +G G R+   ++ EE+++F     Q+  +  +C+
Sbjct: 44 SAVSVWHASMGPGQRDPQISEAEEERQFEASLLQFKRQFLKCL 86


>gi|70167127 carbonic anhydrase VI precursor [Homo sapiens]
          Length = 308

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 4  KEVVLLLLLFLKSGQGEPLDDYVNTQG 30
          + +VLLL LFL  GQ + + D+  ++G
Sbjct: 2  RALVLLLSLFLLGGQAQHVSDWTYSEG 28


>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
           b [Homo sapiens]
          Length = 1524

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 22  LDDYVNT--QGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQCVIMAEN 79
           ++DYV+   Q    F   K +     REE AA+  + KE   +  +   KE+Q  +  + 
Sbjct: 602 IEDYVDILRQAKQEFRELKAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLKEDE 661

Query: 80  RKSS 83
           +++S
Sbjct: 662 QRNS 665


>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
           a [Homo sapiens]
          Length = 1556

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 22  LDDYVNT--QGPSLFSVTKKQLGAGSREECAAKCEEDKEFTCRAFQYHSKEQQCVIMAEN 79
           ++DYV+   Q    F   K +     REE AA+  + KE   +  +   KE+Q  +  + 
Sbjct: 634 IEDYVDILRQAKQEFRELKAEQHRKEREEAAARIRKRKEEKLKEQEQKMKEKQEKLKEDE 693

Query: 80  RKSS 83
           +++S
Sbjct: 694 QRNS 697


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,621,123
Number of Sequences: 37866
Number of extensions: 142483
Number of successful extensions: 291
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 279
Number of HSP's gapped (non-prelim): 25
length of query: 96
length of database: 18,247,518
effective HSP length: 67
effective length of query: 29
effective length of database: 15,710,496
effective search space: 455604384
effective search space used: 455604384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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