Search of human proteins with 4505689

Search of human proteins with 4505689

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4505689 pyruvate dehydrogenase kinase 1 [Homo sapiens]
         (436 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4505689 pyruvate dehydrogenase kinase 1 [Homo sapiens]             882   0.0  
gi|19923736 pyruvate dehydrogenase kinase 2 [Homo sapiens]            587   e-168
gi|215422338 pyruvate dehydrogenase kinase 3 isoform 1 [Homo sap...   570   e-163
gi|4885545 pyruvate dehydrogenase kinase 3 isoform 2 [Homo sapiens]   570   e-163
gi|4505693 pyruvate dehydrogenase kinase 4 [Homo sapiens]             559   e-159
gi|171906589 branched chain ketoacid dehydrogenase kinase isofor...   159   4e-39
gi|171906593 branched chain ketoacid dehydrogenase kinase isofor...   124   2e-28
gi|224451124 neurobeachin-like 1 isoform 3 [Homo sapiens]              32   1.1  
gi|24308414 solute carrier family 10, member 4 [Homo sapiens]          31   1.9  
gi|168229226 hypothetical protein LOC401399 [Homo sapiens]             31   1.9  
gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens]     31   2.5  
gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens]    31   2.5  
gi|61743930 zinc finger and BTB domain containing 41 [Homo sapiens]    30   5.6  
gi|4506737 ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...    29   7.3  
gi|194353966 dynein, axonemal, heavy polypeptide 6 [Homo sapiens]      29   7.3  
gi|33356174 pinin, desmosome associated protein [Homo sapiens]         29   7.3  
gi|37622894 ring finger protein 126 [Homo sapiens]                     29   7.3  

>gi|4505689 pyruvate dehydrogenase kinase 1 [Homo sapiens]
          Length = 436

 Score =  882 bits (2278), Expect = 0.0
 Identities = 436/436 (100%), Positives = 436/436 (100%)

Query: 1   MRLARLLRGAALAGPGPGLRAAGFSRSFSSDSGSSPASERGVPGQVDFYARFSPSPLSMK 60
           MRLARLLRGAALAGPGPGLRAAGFSRSFSSDSGSSPASERGVPGQVDFYARFSPSPLSMK
Sbjct: 1   MRLARLLRGAALAGPGPGLRAAGFSRSFSSDSGSSPASERGVPGQVDFYARFSPSPLSMK 60

Query: 61  QFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQE 120
           QFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQE
Sbjct: 61  QFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQE 120

Query: 121 LLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYF 180
           LLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYF
Sbjct: 121 LLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYF 180

Query: 181 LDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSINPNCNVLEVIKDGYENARRLC 240
           LDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSINPNCNVLEVIKDGYENARRLC
Sbjct: 181 LDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSINPNCNVLEVIKDGYENARRLC 240

Query: 241 DLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHANRGVYPP 300
           DLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHANRGVYPP
Sbjct: 241 DLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHANRGVYPP 300

Query: 301 IQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAPRPRVETSRAVPLAGFGYGLP 360
           IQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAPRPRVETSRAVPLAGFGYGLP
Sbjct: 301 IQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAPRPRVETSRAVPLAGFGYGLP 360

Query: 361 ISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERLPVYNKAAWKHYNTNHEADDW 420
           ISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERLPVYNKAAWKHYNTNHEADDW
Sbjct: 361 ISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERLPVYNKAAWKHYNTNHEADDW 420

Query: 421 CVPSREPKDMTTFRSA 436
           CVPSREPKDMTTFRSA
Sbjct: 421 CVPSREPKDMTTFRSA 436


>gi|19923736 pyruvate dehydrogenase kinase 2 [Homo sapiens]
          Length = 407

 Score =  587 bits (1513), Expect = e-168
 Identities = 277/398 (69%), Positives = 340/398 (85%), Gaps = 3/398 (0%)

Query: 37  ASERGVPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISL 96
           AS  G P  ++ +++FSPSPLSMKQFLDFGS NACEKTSF FLRQELPVRLANIMKEI+L
Sbjct: 11  ASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLANIMKEINL 70

Query: 97  LPDNLLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTM 156
           LPD +L TPSVQLVQSWY+QSL ++++F DK  ED + +  FTD ++ IRNRHNDV+PTM
Sbjct: 71  LPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTM 130

Query: 157 AQGVIEYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHI 216
           AQGV+EYK+++G DPV++QN+QYFLDRFY+SRISIRML+NQH+L+F   G  +P+H KHI
Sbjct: 131 AQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIF--DGSTNPAHPKHI 188

Query: 217 GSINPNCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHM 276
           GSI+PNCNV EV+KD Y+ A+ LCD YY+ SP+LE++E+NA +  QPI +VYVPSHLYHM
Sbjct: 189 GSIDPNCNVSEVVKDAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHM 248

Query: 277 VFELFKNAMRATMEHHANRGVYPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMY 336
           +FELFKNAMRAT+E H +  + PPI+V V LG EDL++KMSDRGGGVPLRKI+RLF+YMY
Sbjct: 249 LFELFKNAMRATVESHESSLILPPIKVMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMY 308

Query: 337 STAPRPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDS 396
           STAP P+  T    PLAGFGYGLPISRLYA+YFQGDL+L+S+EG+GTDAVIY+KALSTDS
Sbjct: 309 STAPTPQPGTG-GTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDS 367

Query: 397 IERLPVYNKAAWKHYNTNHEADDWCVPSREPKDMTTFR 434
           +ERLPVYNK+AW+HY T  EA DWCVPS EPK+ +T+R
Sbjct: 368 VERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYR 405


>gi|215422338 pyruvate dehydrogenase kinase 3 isoform 1 [Homo
           sapiens]
          Length = 415

 Score =  570 bits (1470), Expect = e-163
 Identities = 271/395 (68%), Positives = 333/395 (84%), Gaps = 3/395 (0%)

Query: 42  VPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNL 101
           VP Q++ Y+RFSPSPLS+KQFLDFG  NACEKTS+MFLR+ELPVRLAN M+E++LLPDNL
Sbjct: 12  VPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDNL 71

Query: 102 LRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVI 161
           L  PSV LVQSWY+QS  ELL++++KS ED + + +F   +I++RNRHNDV+PTMAQGVI
Sbjct: 72  LNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVI 131

Query: 162 EYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSINP 221
           EYKE FG DP  S N+QYFLDRFY +RIS RML+NQH+LLFG  G  +P H KHIGSI+P
Sbjct: 132 EYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFG--GDTNPVHPKHIGSIDP 189

Query: 222 NCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELF 281
            CNV +V+KD YE A+ LC+ YY+ +PELE+EE NAK+P +PIQVVYVPSHL+HM+FELF
Sbjct: 190 TCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELF 249

Query: 282 KNAMRATMEHHANRGV-YPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAP 340
           KN+MRAT+E + +R   YP ++  VTLG EDL++K+SD GGGVPLRKIDRLFNYMYSTAP
Sbjct: 250 KNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAP 309

Query: 341 RPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERL 400
           RP +E +RA PLAGFGYGLPISRLYA+YFQGDLKLYS+EG GTDAVIY+KALS++S ERL
Sbjct: 310 RPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERL 369

Query: 401 PVYNKAAWKHYNTNHEADDWCVPSREPKDMTTFRS 435
           PV+NK+AW+HY T  EADDW  PS EP+D + +++
Sbjct: 370 PVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKA 404


>gi|4885545 pyruvate dehydrogenase kinase 3 isoform 2 [Homo sapiens]
          Length = 406

 Score =  570 bits (1470), Expect = e-163
 Identities = 271/395 (68%), Positives = 333/395 (84%), Gaps = 3/395 (0%)

Query: 42  VPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNL 101
           VP Q++ Y+RFSPSPLS+KQFLDFG  NACEKTS+MFLR+ELPVRLAN M+E++LLPDNL
Sbjct: 12  VPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDNL 71

Query: 102 LRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVI 161
           L  PSV LVQSWY+QS  ELL++++KS ED + + +F   +I++RNRHNDV+PTMAQGVI
Sbjct: 72  LNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVI 131

Query: 162 EYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSINP 221
           EYKE FG DP  S N+QYFLDRFY +RIS RML+NQH+LLFG  G  +P H KHIGSI+P
Sbjct: 132 EYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFG--GDTNPVHPKHIGSIDP 189

Query: 222 NCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELF 281
            CNV +V+KD YE A+ LC+ YY+ +PELE+EE NAK+P +PIQVVYVPSHL+HM+FELF
Sbjct: 190 TCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELF 249

Query: 282 KNAMRATMEHHANRGV-YPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAP 340
           KN+MRAT+E + +R   YP ++  VTLG EDL++K+SD GGGVPLRKIDRLFNYMYSTAP
Sbjct: 250 KNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAP 309

Query: 341 RPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERL 400
           RP +E +RA PLAGFGYGLPISRLYA+YFQGDLKLYS+EG GTDAVIY+KALS++S ERL
Sbjct: 310 RPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERL 369

Query: 401 PVYNKAAWKHYNTNHEADDWCVPSREPKDMTTFRS 435
           PV+NK+AW+HY T  EADDW  PS EP+D + +++
Sbjct: 370 PVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKA 404


>gi|4505693 pyruvate dehydrogenase kinase 4 [Homo sapiens]
          Length = 411

 Score =  559 bits (1440), Expect = e-159
 Identities = 263/389 (67%), Positives = 330/389 (84%), Gaps = 3/389 (0%)

Query: 42  VPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNL 101
           VP +V+ ++R+SPSPLSMKQ LDFGS NACE+TSF FLRQELPVRLANI+KEI +LP  L
Sbjct: 20  VPREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQELPVRLANILKEIDILPTQL 79

Query: 102 LRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVI 161
           + T SVQLV+SWYIQSL +L++F +KS +D KA+ DF DT+I++RNRH++V+PTMAQG+I
Sbjct: 80  VNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGII 139

Query: 162 EYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSINP 221
           EYK++  VDPVT+QN+QYFLDRFYM+RIS RML+NQH L+F     G+PSH   IGSI+P
Sbjct: 140 EYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPSH---IGSIDP 196

Query: 222 NCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELF 281
           NC+V+ V++D +E +R LCD YY++SPEL+L ++N K P QPI +VYVPSHL+HM+FELF
Sbjct: 197 NCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELF 256

Query: 282 KNAMRATMEHHANRGVYPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAPR 341
           KNAMRAT+EH  N+    PI+V V LG EDLT+K+SDRGGGVPLR IDRLF+Y YSTAP 
Sbjct: 257 KNAMRATVEHQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPT 316

Query: 342 PRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERLP 401
           P ++ SR  PLAGFGYGLPISRLYA+YFQGDL LYSL GYGTDA+IY+KALS++SIE+LP
Sbjct: 317 PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSESIEKLP 376

Query: 402 VYNKAAWKHYNTNHEADDWCVPSREPKDM 430
           V+NK+A+KHY  + EADDWC+PSREPK++
Sbjct: 377 VFNKSAFKHYQMSSEADDWCIPSREPKNL 405


>gi|171906589 branched chain ketoacid dehydrogenase kinase isoform a
           [Homo sapiens]
          Length = 412

 Score =  159 bits (403), Expect = 4e-39
 Identities = 113/341 (33%), Positives = 182/341 (53%), Gaps = 40/341 (11%)

Query: 75  SFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKA 134
           S  +L+QELPVR+A+ +K    LP  +   P++  V   YI++ Q+L DF     +  +A
Sbjct: 90  SARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEA 149

Query: 135 IYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYFLDRFYMSRISIRML 194
            Y     V ++ + H DV+  +A+G+ E ++    + +    V+YFLD+   SR+ IRML
Sbjct: 150 QY--CQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKL----VRYFLDKTLTSRLGIRML 203

Query: 195 LNQHSLLFGGKGKGSPSHRKHIGSINPNCNVLEVIKDGYENARRLCDLYYINSPELELE- 253
              H  L   K          +G I    +  ++I+   + ARRLC+  Y N+P + +  
Sbjct: 204 ATHHLALHEDKPD-------FVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRING 256

Query: 254 ELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHANRGVYPPIQVHVTLGNED-- 311
            + A+ P       ++P  L +++ EL KNAMRATME H +     P  V +T+ N D  
Sbjct: 257 HVAARFP-------FIPMPLDYILPELLKNAMRATMESHLDTPYNVP-DVVITIANNDVD 308

Query: 312 LTVKMSDRGGGVPLRKIDRLFNYMYSTAPR----PRVET----------SRAVPLAGFGY 357
           L +++SDRGGG+  + +DR+ +Y ++TA      PR+            +++ P+ GFG+
Sbjct: 309 LIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGF 368

Query: 358 GLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIE 398
           GLP SR YA+Y  G L+L SL+G GTD  +Y++    D  E
Sbjct: 369 GLPTSRAYAEYLGGSLQLQSLQGIGTD--VYLRLRHIDGRE 407


>gi|171906593 branched chain ketoacid dehydrogenase kinase isoform b
           [Homo sapiens]
          Length = 365

 Score =  124 bits (310), Expect = 2e-28
 Identities = 91/283 (32%), Positives = 149/283 (52%), Gaps = 25/283 (8%)

Query: 75  SFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKA 134
           S  +L+QELPVR+A+ +K    LP  +   P++  V   YI++ Q+L DF     +  +A
Sbjct: 90  SARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEA 149

Query: 135 IYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYFLDRFYMSRISIRML 194
            Y     V ++ + H DV+  +A+G+ E ++    + +    V+YFLD+   SR+ IRML
Sbjct: 150 QY--CQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKL----VRYFLDKTLTSRLGIRML 203

Query: 195 LNQHSLLFGGKGKGSPSHRKHIGSINPNCNVLEVIKDGYENARRLCDLYYINSPELELE- 253
              H  L   K          +G I    +  ++I+   + ARRLC+  Y N+P + +  
Sbjct: 204 ATHHLALHEDKPD-------FVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRING 256

Query: 254 ELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHANRGVYPPIQVHVTLGNED-- 311
            + A+ P       ++P  L +++ EL KNAMRATME H +     P  V +T+ N D  
Sbjct: 257 HVAARFP-------FIPMPLDYILPELLKNAMRATMESHLDTPYNVP-DVVITIANNDVD 308

Query: 312 LTVKMSDRGGGVPLRKIDRLFNYMYSTAPRPRVETSRAVPLAG 354
           L +++SDRGGG+  + +DR+ +Y ++TA     +  R  PL G
Sbjct: 309 LIIRISDRGGGIAHKDLDRVMDYHFTTA-EASTQDPRISPLFG 350


>gi|224451124 neurobeachin-like 1 isoform 3 [Homo sapiens]
          Length = 2694

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 14/31 (45%), Positives = 23/31 (74%)

Query: 81  QELPVRLANIMKEISLLPDNLLRTPSVQLVQ 111
           ++LP R+ ++   ISLLPDN+L+   +QL+Q
Sbjct: 43  EKLPTRVDDMPPGISLLPDNILQVLRIQLLQ 73


>gi|24308414 solute carrier family 10, member 4 [Homo sapiens]
          Length = 437

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 7  LRGAALAGPGPGLRAAGFSRSFSSDSGSSPASERGVPGQVDFYARFSPSP 56
          L  A+ AGPGPGL + G   SF    G +P  E    G     A   PSP
Sbjct: 36 LAPASSAGPGPGL-SLGPGPSFGFSPGPTPTPEPTTSGLAGGAASHGPSP 84


>gi|168229226 hypothetical protein LOC401399 [Homo sapiens]
          Length = 899

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 7/65 (10%)

Query: 4   ARLLRGAALAGPGPG-LRAAGFSRSF---SSDSGSSPASERGVPGQVDFYARFSPSPLSM 59
           A LL+  ALAGPGP  L   G  R F   +++   SPAS       VDF     PSP+++
Sbjct: 672 AELLQLCALAGPGPDLLLQGGGCRGFEGAAANPAPSPASSPCSDYTVDFR---PPSPINL 728

Query: 60  KQFLD 64
           ++ ++
Sbjct: 729 RRSIE 733


>gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens]
          Length = 725

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 3   LARLLRGAALAGPGPGLRAAGFSRSFSSDSGSSPASERGVPGQVDFYARFSPSPLSMKQF 62
           L  LLR AA AG  P     G + S ++   SSPA   G P      +     P+ +++ 
Sbjct: 70  LLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASG-PAPSAVSSSSPTPPVRLRKT 128

Query: 63  LDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQ 108
           LD       +  +    R E+  RL  I+  +++L    ++T S+Q
Sbjct: 129 LDLALSILADCCTEGACRTEVR-RLGGILPLVTIL--QCMKTDSIQ 171


>gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens]
          Length = 935

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 3   LARLLRGAALAGPGPGLRAAGFSRSFSSDSGSSPASERGVPGQVDFYARFSPSPLSMKQF 62
           L  LLR AA AG  P     G + S ++   SSPA   G P      +     P+ +++ 
Sbjct: 70  LLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASG-PAPSAVSSSSPTPPVRLRKT 128

Query: 63  LDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNLLRTPSVQ 108
           LD       +  +    R E+  RL  I+  +++L    ++T S+Q
Sbjct: 129 LDLALSILADCCTEGACRTEVR-RLGGILPLVTIL--QCMKTDSIQ 171


>gi|61743930 zinc finger and BTB domain containing 41 [Homo sapiens]
          Length = 909

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 209 SPSHRKHIGSINPNCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVY 268
           SP  RK + S+  N N+L+ + D  +     CDL  I    +E +E +A        VV 
Sbjct: 57  SPDQRKLLSSLQYNKNLLKYLNDDRQKQPSFCDLLII----VEGKEFSAHK-----VVVA 107

Query: 269 VPSHLYHMVFELFKNAMRATMEH 291
           V S  +H       +    T++H
Sbjct: 108 VGSSYFHACLSKNPSTDVVTLDH 130


>gi|4506737 ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Homo
           sapiens]
          Length = 525

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 127 KSAEDAKAIYDFTDTV------IRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQNVQYF 180
           +S  D    + F  T+      I +R+ HN  +   + G + Y    G  P T +N +  
Sbjct: 242 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT 301

Query: 181 LDRFYMSRISIRMLLNQHS 199
           +D+    ++++   L Q +
Sbjct: 302 IDKILKCKLNLPPYLTQEA 320


>gi|194353966 dynein, axonemal, heavy polypeptide 6 [Homo sapiens]
          Length = 4158

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 97  LPDNLLRTPSVQLVQSWYIQSLQELLDFK-----DKSAEDAKAIYDF-TDTVIRIRN 147
           L D L RTPS  ++Q W  +   E+ D K     +K  ED   I  F T+ ++ +++
Sbjct: 467 LTDKLKRTPSADVIQKWITEEKPEVPDKKGTLMVEKQEEDESLIPMFLTELMLTVQS 523


>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
          Length = 717

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 4  ARLLRGAALAGPGPGLRAAG---FSRSFSSDSGSSPASERGVPGQV 46
          ARLL   AL+GPG G R  G     R FS   G  PA +R + G V
Sbjct: 42 ARLL---ALSGPGGG-RGRGSLLLRRGFSDSGGGPPAKQRDLEGAV 83


>gi|37622894 ring finger protein 126 [Homo sapiens]
          Length = 311

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 16/33 (48%), Positives = 18/33 (54%)

Query: 7   LRGAALAGPGPGLRAAGFSRSFSSDSGSSPASE 39
           L G   A   PGL    FS S SS S SSP++E
Sbjct: 273 LTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNE 305


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,047,184
Number of Sequences: 37866
Number of extensions: 792008
Number of successful extensions: 2079
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2052
Number of HSP's gapped (non-prelim): 19
length of query: 436
length of database: 18,247,518
effective HSP length: 105
effective length of query: 331
effective length of database: 14,271,588
effective search space: 4723895628
effective search space used: 4723895628
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.